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ClCG01G017930 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G017930
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionEpidermal patterning factor-like protein
Genome locationCG_Chr01:32450547..32452299
RNA-Seq ExpressionClCG01G017930
SyntenyClCG01G017930
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594944.1 EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0984.78Show/hide
Query:  RRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEG
        R K  M CECNNNGVIG RSRILC+TLS LFFLILASTQMRFMAEG
Subjt:  RRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEG

XP_022963149.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]5.5e-1159.52Show/hide
Query:  IFCWVNGFWWLFFRVLHFSGEFPCLFHTLPSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS
        +FC +  F+ LFFRVL  S  F             RK  M CECNNNGVIG RSRILC+T+S LFFLILASTQMRFMAEG  +S
Subjt:  IFCWVNGFWWLFFRVLHFSGEFPCLFHTLPSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS

XP_023003266.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita maxima]4.2e-1176.36Show/hide
Query:  PSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS
        PSLSVR K  M CECNNNGVIG R RILC+T+S LF LILASTQMRFMAEG  +S
Subjt:  PSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS

XP_023518504.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo]8.4e-1284.31Show/hide
Query:  PSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEG
        P LSVR K  M CECNNNGVIG RSRILC+TLS LFFLILASTQMRFMAEG
Subjt:  PSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEG

XP_038882801.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Benincasa hispida]3.9e-0977.55Show/hide
Query:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVSFEIS
        M CEC NNGV+GSRSRILCST+SLLFFLILASTQMRFMAEG  +S  ++
Subjt:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVSFEIS

TrEMBL top hitse value%identityAlignment
A0A0A0KGK0 Epidermal patterning factor-like protein6.1e-0878.26Show/hide
Query:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGNWVS
        M CEC NNGVIG RSR ILC  +SLLFFLILASTQMRFMAEG ++S
Subjt:  MVCECNNNGVIGSRSR-ILCSTLSLLFFLILASTQMRFMAEGNWVS

A0A6J1BSQ3 Epidermal patterning factor-like protein1.0e-0779.55Show/hide
Query:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWV
        M CECNNNGVIG RSRILC+T+  LF LILASTQMRFMAEG  V
Subjt:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWV

A0A6J1HJ94 Epidermal patterning factor-like protein2.6e-1159.52Show/hide
Query:  IFCWVNGFWWLFFRVLHFSGEFPCLFHTLPSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS
        +FC +  F+ LFFRVL  S  F             RK  M CECNNNGVIG RSRILC+T+S LFFLILASTQMRFMAEG  +S
Subjt:  IFCWVNGFWWLFFRVLHFSGEFPCLFHTLPSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS

A0A6J1KLZ1 Epidermal patterning factor-like protein7.9e-0877.78Show/hide
Query:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS
        M CECNNNGVIG R RILC+T+S LF LILASTQMRFMAEG  +S
Subjt:  MVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS

A0A6J1KNP8 Epidermal patterning factor-like protein2.0e-1176.36Show/hide
Query:  PSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS
        PSLSVR K  M CECNNNGVIG R RILC+T+S LF LILASTQMRFMAEG  +S
Subjt:  PSLSVRRKGTMVCECNNNGVIGSRSRILCSTLSLLFFLILASTQMRFMAEGNWVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACAAACCCTGAATCTCATATACTCCATGGGCTGTTTAAAGAGCAGAAGCCCAAATAATAATATAATGTGGCCAATTCATGTTAGCCAAAATCTTGTAGTCACTCT
CTTGCTTGGGAAGAAGAAAGGATATGGATATGGCGTGATTAGGAATTTTATTTTCTGTTGGGTTAATGGTTTTTGGTGGCTCTTCTTTCGAGTTCTGCACTTTTCGGGAG
AATTTCCCTGTCTCTTTCACACACTGCCCTCTCTCTCTGTGAGAAGAAAAGGAACAATGGTGTGCGAGTGTAACAACAATGGCGTCATTGGCTCGCGCAGTAGAATCTTG
TGTTCGACTCTTTCTCTTCTCTTTTTTCTGATTTTGGCATCCACCCAGATGAGATTTATGGCTGAAGGTAACTGGGTATCTTTTGAAATTTCAAAAAACAGTTCAAAACT
AGATTTTTATTCTTCCAACTTCAATTTCAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAACAAACCCTGAATCTCATATACTCCATGGGCTGTTTAAAGAGCAGAAGCCCAAATAATAATATAATGTGGCCAATTCATGTTAGCCAAAATCTTGTAGTCACTCT
CTTGCTTGGGAAGAAGAAAGGATATGGATATGGCGTGATTAGGAATTTTATTTTCTGTTGGGTTAATGGTTTTTGGTGGCTCTTCTTTCGAGTTCTGCACTTTTCGGGAG
AATTTCCCTGTCTCTTTCACACACTGCCCTCTCTCTCTGTGAGAAGAAAAGGAACAATGGTGTGCGAGTGTAACAACAATGGCGTCATTGGCTCGCGCAGTAGAATCTTG
TGTTCGACTCTTTCTCTTCTCTTTTTTCTGATTTTGGCATCCACCCAGATGAGATTTATGGCTGAAGGTAACTGGGTATCTTTTGAAATTTCAAAAAACAGTTCAAAACT
AGATTTTTATTCTTCCAACTTCAATTTCAGTTAAACTGAATCGTTTTTTTTCCTTGCAGGCAGATTGATTTCAAGGAGTGGCAAGACAGTGAATAATGAAGATAAAATGG
TATTGAGAGGACAAATTGGGTCGAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGGACATTGTGAGGCCATCCAAGTTCCAGCAAACCCACAAAAATCAGCAACT
AAAAACTCTTCGACCATGAACAACATAGCTTATGCTAGAGATGAAGCCTCCAATTACAAACCCATGAGCTGGAAATGCAAATGTGGAAGCTTAATCTTCAATCCTTAACT
ATTTAATAGAATCCCTCCTCTCAATCTCTTCCTCTGTAAATTAGTGATTATATATGATTGTTAATTTCTTTAACTTAACCACCCTGATTTCTCTATCTCTCTTTCTTTTT
AATTTGTACTGCAATTTGATAAGATAATGAAGAGTAGTATTATGATTGAATTGAACAAATTCCTTTCATATTATTGTTGGTGTCAACTTGGTAAATTGAATTAGAAAAAG
ACACAAAGAGATAGAAAAGGAAGTGGGTTGTGA
Protein sequenceShow/hide protein sequence
MQQTLNLIYSMGCLKSRSPNNNIMWPIHVSQNLVVTLLLGKKKGYGYGVIRNFIFCWVNGFWWLFFRVLHFSGEFPCLFHTLPSLSVRRKGTMVCECNNNGVIGSRSRIL
CSTLSLLFFLILASTQMRFMAEGNWVSFEISKNSSKLDFYSSNFNFS