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ClCG01G020090 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G020090
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr01:34217707..34221055
RNA-Seq ExpressionClCG01G020090
SyntenyClCG01G020090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647602.1 hypothetical protein Csa_004179 [Cucumis sativus]2.4e-1649.21Show/hide
Query:  MGRERGYGVLLVLGI-LLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLFGVGVTGRNVTVTGGKGGGNSSGE------GGGGS--GVRKKDTKHHKE
        M  ERG GVLL LGI L+SIYLVEGK   S + + S+   SN WS+L+++L      GRN+T++GGKGG NSSGE      GGGGS  GVRKKDTKH+K+
Subjt:  MGRERGYGVLLVLGI-LLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLFGVGVTGRNVTVTGGKGGGNSSGE------GGGGS--GVRKKDTKHHKE

Query:  QGKNGNGGGGGG-----------------------------RGGNGGGGGGGGGGGGVFVGFGDVVAAA----VMEKPWLEEEVLQTKK
         GK+GNGGGG G                              G +GGG G G  G   FVGFGDV  AA    VMEK W+ E+V QTKK
Subjt:  QGKNGNGGGGGG-----------------------------RGGNGGGGGGGGGGGGVFVGFGDVVAAA----VMEKPWLEEEVLQTKK

KAG6603927.1 hypothetical protein SDJN03_04536, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1455.41Show/hide
Query:  MGRERGYGVLLVLGILLSIYLVEG-KGANSSEKSRSLDGISNQWSNLDDTLF-GVGVTGRNVTVTGGK---------------GGGNSSGEGGGGS----
        M R RG GVLLV+GI+LS+YLVEG KG   S +     G SN+WS LD   F GVGV+GRN TV GG+               GGG   G GGGG+    
Subjt:  MGRERGYGVLLVLGILLSIYLVEG-KGANSSEKSRSLDGISNQWSNLDDTLF-GVGVTGRNVTVTGGK---------------GGGNSSGEGGGGS----

Query:  ---GVRKKDTKHHKEQGKNGNGGGGGGRGGNG-----GGGGGGGGGGG
           GVRKKDTKH K+ GK GNGGGGGG GG G     GGGGGGGGGGG
Subjt:  ---GVRKKDTKHHKEQGKNGNGGGGGGRGGNG-----GGGGGGGGGGG

XP_022977280.1 putative glycine-rich cell wall structural protein 1 [Cucurbita maxima]7.6e-0748.67Show/hide
Query:  MGRERGYGVLLVLGILLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLF-GVGVTGRNVTVTGGK---------------GGGNSSGEGGGGSGVR--
        M R R  GVLLV+GI+LS+ LVE  G    E+S S+D  SN+WS LD +LF GVGV+GRN TV GG                GGG   G GG GSGV   
Subjt:  MGRERGYGVLLVLGILLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLF-GVGVTGRNVTVTGGK---------------GGGNSSGEGGGGSGVR--

Query:  -------KKDTKHHKEQGKNGNGGGGGGRGGNGGGGGGGGGGGGVFVGFG
               +K       +G+ G  GGGGG GG GGGGGGGGG GG + GFG
Subjt:  -------KKDTKHHKEQGKNGNGGGGGGRGGNGGGGGGGGGGGGVFVGFG

XP_038882243.1 glycine-rich protein DOT1-like [Benincasa hispida]2.9e-2256.36Show/hide
Query:  MGRERGYGVLLVLGI-LLSIYL--VEGKGANSSEKSRSLDGISNQWSNLDDTLFGVGVTGRNVTVTGGKGGGNSSGE---GGGGSGVRKKDTKHHKEQ--
        M RERG+GVLL++GI L+SIYL  VEGK   + E S +L   SNQWSN D++L+GVG+TGRNVTV+GGKGGGNSSGE   GGGG GVRKKD KH+K+   
Subjt:  MGRERGYGVLLVLGI-LLSIYL--VEGKGANSSEKSRSLDGISNQWSNLDDTLFGVGVTGRNVTVTGGKGGGNSSGE---GGGGSGVRKKDTKHHKEQ--

Query:  -----------------GKNGNGGGGGGRGGNGGGGGGGGGGG---GVFVGFGDVVAAAVMEKPW
                         G  GNGGGGGG GG+GGGGGGGGG G   G   G G V A    E  W
Subjt:  -----------------GKNGNGGGGGGRGGNGGGGGGGGGGG---GVFVGFGDVVAAAVMEKPW

TrEMBL top hitse value%identityAlignment
A0A0A0KGL8 Uncharacterized protein1.3e-2353.16Show/hide
Query:  MGRERGYGVLLVLGI-LLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLFGVGVTGRNVTVTGGKGGGNSSGE------GGGGS--GVRKKDTKHHKE
        M  ERG GVLL LGI L+SIYLVEGK   S + + S+   SN WS+L+++L      GRN+T++GGKGG NSSGE      GGGGS  GVRKKDTKH+K+
Subjt:  MGRERGYGVLLVLGI-LLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLFGVGVTGRNVTVTGGKGGGNSSGE------GGGGS--GVRKKDTKHHKE

Query:  QGKNGNGGGGGGRGGNGGGGGGGGGGGG------------------------------VFVGFGDVVAAA----VMEKPWLEEEVLQTKK
         GK+GNGGGGGG GGNGGGGGGGG GGG                               FVGFGDV  AA    VMEK W+ E+V QTKK
Subjt:  QGKNGNGGGGGGRGGNGGGGGGGGGGGG------------------------------VFVGFGDVVAAA----VMEKPWLEEEVLQTKK

A0A6J1ILV4 putative glycine-rich cell wall structural protein 13.7e-0748.67Show/hide
Query:  MGRERGYGVLLVLGILLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLF-GVGVTGRNVTVTGGK---------------GGGNSSGEGGGGSGVR--
        M R R  GVLLV+GI+LS+ LVE  G    E+S S+D  SN+WS LD +LF GVGV+GRN TV GG                GGG   G GG GSGV   
Subjt:  MGRERGYGVLLVLGILLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLF-GVGVTGRNVTVTGGK---------------GGGNSSGEGGGGSGVR--

Query:  -------KKDTKHHKEQGKNGNGGGGGGRGGNGGGGGGGGGGGGVFVGFG
               +K       +G+ G  GGGGG GG GGGGGGGGG GG + GFG
Subjt:  -------KKDTKHHKEQGKNGNGGGGGGRGGNGGGGGGGGGGGGVFVGFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGAAAGGGGTTATGGGGTTCTTTTGGTTCTTGGAATTTTGTTGAGCATTTACTTGGTTGAGGGGAAGGGGGCGAATAGTTCTGAAAAAAGTCGAAGTCTTGA
TGGTATATCCAATCAATGGTCTAATTTGGATGATACCCTCTTTGGAGTTGGTGTAACCGGAAGAAATGTGACTGTTACTGGCGGCAAGGGTGGAGGAAATTCATCCGGTG
AGGGCGGCGGTGGTAGTGGGGTAAGAAAGAAAGATACAAAACATCATAAAGAACAAGGAAAAAACGGAAATGGCGGTGGTGGAGGAGGTCGCGGGGGCAATGGTGGTGGC
GGTGGAGGTGGAGGAGGAGGAGGAGGGGTTTTTGTTGGATTTGGGGATGTGGTGGCGGCGGCGGTCATGGAAAAGCCTTGGCTAGAAGAGGAGGTCCTTCAAACTAAAAA
GTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGAAAGGGGTTATGGGGTTCTTTTGGTTCTTGGAATTTTGTTGAGCATTTACTTGGTTGAGGGGAAGGGGGCGAATAGTTCTGAAAAAAGTCGAAGTCTTGA
TGGTATATCCAATCAATGGTCTAATTTGGATGATACCCTCTTTGGAGTTGGTGTAACCGGAAGAAATGTGACTGTTACTGGCGGCAAGGGTGGAGGAAATTCATCCGGTG
AGGGCGGCGGTGGTAGTGGGGTAAGAAAGAAAGATACAAAACATCATAAAGAACAAGGAAAAAACGGAAATGGCGGTGGTGGAGGAGGTCGCGGGGGCAATGGTGGTGGC
GGTGGAGGTGGAGGAGGAGGAGGAGGGGTTTTTGTTGGATTTGGGGATGTGGTGGCGGCGGCGGTCATGGAAAAGCCTTGGCTAGAAGAGGAGGTCCTTCAAACTAAAAA
GTAA
Protein sequenceShow/hide protein sequence
MGRERGYGVLLVLGILLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLFGVGVTGRNVTVTGGKGGGNSSGEGGGGSGVRKKDTKHHKEQGKNGNGGGGGGRGGNGGG
GGGGGGGGGVFVGFGDVVAAAVMEKPWLEEEVLQTKK