; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG01G021280 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G021280
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr01:35173444..35173869
RNA-Seq ExpressionClCG01G021280
SyntenyClCG01G021280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025575.1 hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa]4.2e-5579.43Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELIL
        MGNCINT HFPPLQKIKGFICC+VE L+L LPI  +A  AY   K  SQAFTTSSAV EV+H PPPLP+RID SI+KPAD  KLPKATIVVSKQQLELIL
Subjt:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELIL

Query:  RNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
        R SK+FGSKGIAVQFSD F+VDD CPRW PALPTIPEVRNY
Subjt:  RNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY

KAE8647639.1 hypothetical protein Csa_004428 [Cucumis sativus]1.9e-5581.29Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAV--LEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLEL
        MGNCINT HFPPLQKIKGFICC+VEDLNLALPIE IA          +QAFTTSSAV   EVEHGPPPLP+RID SI+KPADLCKLPK TIVVSKQQLEL
Subjt:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAV--LEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLEL

Query:  ILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPE
        ILR SK+FGSKGIAVQFSDSF+VDD CPRW PALPTIPE
Subjt:  ILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPE

KAF9851460.1 hypothetical protein H0E87_015599 [Populus deltoides]1.6e-1440.13Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAF-------TTSSAVLEVEHGPPPL--PLRID-DSIIKPADLCKLPKATI
        MGNCI+   +   ++ K  I    E +   +  ++KI  G Y G  L   A         T     EV H  P L  P R++  S +   + C   K  I
Subjt:  MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAF-------TTSSAVLEVEHGPPPL--PLRID-DSIIKPADLCKLPKATI

Query:  VVSKQQLELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
        VV++QQLEL+LRNSK F SKGIAV+FS+SF+  +R  +WRP+L TIPEVR +
Subjt:  VVSKQQLELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY

KAG6594706.1 hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2753.79Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRI----DDSIIKPADLCKLPKATIVVSKQQL
        MGNCI++PH                  +LA+P+EKIA     GLKLT       SAVLEV  G    P  +    DD I KPA LCKLPKATIVVSK+QL
Subjt:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRI----DDSIIKPADLCKLPKATIVVSKQQL

Query:  ELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
        E +L NS+ FGS+GIAVQFSDSF+ D  C RW P LPTI EV NY
Subjt:  ELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY

KAG6603830.1 hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia]8.5e-4872.92Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRI--DDSIIKPADLCKLPK-ATIVVSKQQLE
        MGNCINT HF PLQK+K  ICC+ EDL+LALPIEKIA GAY          TTSSAVLEV+ G PPLP+ I  DD++ KP  LCKLPK  TIVVSKQQLE
Subjt:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRI--DDSIIKPADLCKLPK-ATIVVSKQQLE

Query:  LILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
        LILRNS+ F SKGIAVQFSDSFEVDDRCPRW PALPTI EV NY
Subjt:  LILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY

TrEMBL top hitse value%identityAlignment
A0A0A0KHP3 Uncharacterized protein2.0e-5881.82Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAV--LEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLEL
        MGNCINT HFPPLQKIKGFICC+VEDLNLALPIE IA          +QAFTTSSAV   EVEHGPPPLP+RID SI+KPADLCKLPK TIVVSKQQLEL
Subjt:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAV--LEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLEL

Query:  ILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
        ILR SK+FGSKGIAVQFSDSF+VDD CPRW PALPTIPEVRNY
Subjt:  ILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY

A0A5D3CLY8 Uncharacterized protein2.0e-5579.43Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELIL
        MGNCINT HFPPLQKIKGFICC+VE L+L LPI  +A  AY   K  SQAFTTSSAV EV+H PPPLP+RID SI+KPAD  KLPKATIVVSKQQLELIL
Subjt:  MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELIL

Query:  RNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
        R SK+FGSKGIAVQFSD F+VDD CPRW PALPTIPEVRNY
Subjt:  RNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY

A0A5N5M953 Uncharacterized protein2.8e-1240.27Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAFTTS----SAVL---EVEHGPPPL--PLRID-DSIIKPADLCKLPKATI
        MGNCI+       ++ K  I    E +   + P++KI  G Y G  L ++A   +      VL   EV H  PPL  P R++  S +   + C   K  I
Subjt:  MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAFTTS----SAVL---EVEHGPPPL--PLRID-DSIIKPADLCKLPKATI

Query:  VVSKQQLELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEV
        VV++QQLEL+LRNSK    +GIAVQFS+SF+   R  +W+P+L TIPEV
Subjt:  VVSKQQLELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEV

A0A6A1W907 Uncharacterized protein1.8e-1132.48Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAFTTSSAV---------------LEVEHGPPPLPLRIDDSIIKPADLCKL
        MGNC +    P  +KI+  +  + E + +   P+EKI  G Y G KL   +   S  +               L+ +   PP+P R  +      +  K 
Subjt:  MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAFTTSSAV---------------LEVEHGPPPLPLRIDDSIIKPADLCKL

Query:  PKATIVVSKQQLELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
         K  IVV+K QLEL+LR++  F SK IA+    SF+V +   +WRP+L  IPEV ++
Subjt:  PKATIVVSKQQLELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY

B9HD50 Uncharacterized protein5.6e-1337.5Show/hide
Query:  MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGP-------PPL--PLRID-DSIIKPADLCKLPKATI
        MGNCI+   +   ++ K  I    E +   +  ++KI  G Y G  L   A        +    P       P L  P R++  S +   + C   K  I
Subjt:  MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGP-------PPL--PLRID-DSIIKPADLCKLPKATI

Query:  VVSKQQLELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
        VV++QQLEL+LRNSK F SKGIAV+FS+SF+  +R  +WRP+L TIPEV+ +
Subjt:  VVSKQQLELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGCATCAACACACCCCATTTCCCACCTCTGCAAAAGATCAAAGGCTTCATATGCTGTCAAGTAGAAGATTTAAACTTGGCATTGCCCATTGAAAAGATAGC
TTATGGAGCTTATAAAGGCTTAAAGCTAACAAGTCAAGCCTTTACAACTTCGAGTGCAGTGCTAGAAGTTGAGCATGGCCCTCCTCCACTTCCTCTTCGTATTGATGATT
CTATTATCAAGCCAGCAGATTTGTGCAAACTTCCTAAGGCCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGAAATTCTAAAAGCTTTGGCTCTAAAGGT
ATTGCTGTTCAATTCTCTGATAGTTTCGAGGTCGACGATCGATGCCCCAGATGGCGCCCCGCCTTGCCTACCATTCCAGAGGTTCGCAATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTGCATCAACACACCCCATTTCCCACCTCTGCAAAAGATCAAAGGCTTCATATGCTGTCAAGTAGAAGATTTAAACTTGGCATTGCCCATTGAAAAGATAGC
TTATGGAGCTTATAAAGGCTTAAAGCTAACAAGTCAAGCCTTTACAACTTCGAGTGCAGTGCTAGAAGTTGAGCATGGCCCTCCTCCACTTCCTCTTCGTATTGATGATT
CTATTATCAAGCCAGCAGATTTGTGCAAACTTCCTAAGGCCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGAAATTCTAAAAGCTTTGGCTCTAAAGGT
ATTGCTGTTCAATTCTCTGATAGTTTCGAGGTCGACGATCGATGCCCCAGATGGCGCCCCGCCTTGCCTACCATTCCAGAGGTTCGCAATTACTAG
Protein sequenceShow/hide protein sequence
MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSKG
IAVQFSDSFEVDDRCPRWRPALPTIPEVRNY