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ClCG01G021390 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G021390
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr01:35228945..35230785
RNA-Seq ExpressionClCG01G021390
SyntenyClCG01G021390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603822.1 hypothetical protein SDJN03_04431, partial [Cucurbita argyrosperma subsp. sororia]8.1e-0581.25Show/hide
Query:  RDLLRCGWSHIPSPCGAASLPLPPGTGHETNI
        ++LLR GWSHIPSPC AASLPLPPGT HET I
Subjt:  RDLLRCGWSHIPSPCGAASLPLPPGTGHETNI
KGN49921.1 hypothetical protein Csa_000564 [Cucumis sativus]1.9e-2259.65Show/hide
Query:  RRETSARKSLTTRKQTSPISAQFR-----------------DLLRCGWSHIPSPCGAASLPLPPGTGHETNIFI-------SLSIILLIAGVNVTKKFPS
        RRETSARKSLT RKQ  P+SA+FR                 D+LRCGWSHIPSPCGAASL LP  TGHETNI I       + ++   I GVNVTKK  S
Subjt:  RRETSARKSLTTRKQTSPISAQFR-----------------DLLRCGWSHIPSPCGAASLPLPPGTGHETNIFI-------SLSIILLIAGVNVTKKFPS

Query:  MLMAPFWNLRRLLV
        MLMAP WNL RLLV
Subjt:  MLMAPFWNLRRLLV
TrEMBL top hitse value%identityAlignment
A0A0A0KQD9 Uncharacterized protein9.3e-2359.65Show/hide
Query:  RRETSARKSLTTRKQTSPISAQFR-----------------DLLRCGWSHIPSPCGAASLPLPPGTGHETNIFI-------SLSIILLIAGVNVTKKFPS
        RRETSARKSLT RKQ  P+SA+FR                 D+LRCGWSHIPSPCGAASL LP  TGHETNI I       + ++   I GVNVTKK  S
Subjt:  RRETSARKSLTTRKQTSPISAQFR-----------------DLLRCGWSHIPSPCGAASLPLPPGTGHETNIFI-------SLSIILLIAGVNVTKKFPS

Query:  MLMAPFWNLRRLLV
        MLMAP WNL RLLV
Subjt:  MLMAPFWNLRRLLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35750.1 unknown protein4.3e-0467.65Show/hide
Query:  LLRCGW----SHIPSPCGAASLPLPPGTGHETNI
        LLR G+    SHIP PCGAASL LP GTGHE  I
Subjt:  LLRCGW----SHIPSPCGAASLPLPPGTGHETNI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGCTCTGGAGAAGGTCGACCTCAACCTCATCAAGGCAAGGCTGAGGAGGTTGGTTTTGGGACTTTCGACCCAAATAGCCTCGTCCCTGCCCGAGAACTGACCAA
ACTATTTTGGCTCAAAGTCCAATTGGCCTTTTTCCTCAAGACAAAGATTTCATTGAGCCTAGCTCGCCCAAGAGTACTTTCGGAGACCCTAGACAATTCAAAGGCTGAGA
TTGATTTCTATAACAATCAAACGGCCTACAATTTCCAACCTTTCCTATATATTCAACCTGGACGGCCAAAACTCTTCATCCGCCAAACTCCATCACACCGCCCTCGACGG
GAAACTTCTGCGAGGAAGTCTCTTACTACAAGGAAGCAGACTAGTCCTATATCTGCACAGTTCCGAGATCTCCTCCGTTGTGGGTGGTCTCATATTCCGTCGCCTTGTGG
AGCAGCGTCGCTGCCATTACCACCTGGGACTGGCCATGAGACGAACATTTTTATTTCTTTATCGATAATTCTACTGATTGCCGGAGTTAACGTCACAAAGAAATTCCCGT
CGATGTTGATGGCTCCTTTTTGGAATCTCCGTCGGCTGCTGGTATCATATTCCATTGCCTTGTGGAGCAGCGTTGCTGCCTTTACTTCTTGGGACTGGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGCTCTGGAGAAGGTCGACCTCAACCTCATCAAGGCAAGGCTGAGGAGGTTGGTTTTGGGACTTTCGACCCAAATAGCCTCGTCCCTGCCCGAGAACTGACCAA
ACTATTTTGGCTCAAAGTCCAATTGGCCTTTTTCCTCAAGACAAAGATTTCATTGAGCCTAGCTCGCCCAAGAGTACTTTCGGAGACCCTAGACAATTCAAAGGCTGAGA
TTGATTTCTATAACAATCAAACGGCCTACAATTTCCAACCTTTCCTATATATTCAACCTGGACGGCCAAAACTCTTCATCCGCCAAACTCCATCACACCGCCCTCGACGG
GAAACTTCTGCGAGGAAGTCTCTTACTACAAGGAAGCAGACTAGTCCTATATCTGCACAGTTCCGAGATCTCCTCCGTTGTGGGTGGTCTCATATTCCGTCGCCTTGTGG
AGCAGCGTCGCTGCCATTACCACCTGGGACTGGCCATGAGACGAACATTTTTATTTCTTTATCGATAATTCTACTGATTGCCGGAGTTAACGTCACAAAGAAATTCCCGT
CGATGTTGATGGCTCCTTTTTGGAATCTCCGTCGGCTGCTGGTATCATATTCCATTGCCTTGTGGAGCAGCGTTGCTGCCTTTACTTCTTGGGACTGGCCATGA
Protein sequenceShow/hide protein sequence
MVSSGEGRPQPHQGKAEEVGFGTFDPNSLVPARELTKLFWLKVQLAFFLKTKISLSLARPRVLSETLDNSKAEIDFYNNQTAYNFQPFLYIQPGRPKLFIRQTPSHRPRR
ETSARKSLTTRKQTSPISAQFRDLLRCGWSHIPSPCGAASLPLPPGTGHETNIFISLSIILLIAGVNVTKKFPSMLMAPFWNLRRLLVSYSIALWSSVAAFTSWDWP