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ClCG01G022040 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G022040
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionExpression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.
Genome locationCG_Chr01:35669041..35669400
RNA-Seq ExpressionClCG01G022040
SyntenyClCG01G022040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603773.1 hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3569.05Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---
        MGNCCR QSSTP +   NRR  P +N RQR+   SS  CS+T K  KEGN++E+KIRMTKKEL+ELVGWLNMADSSFE VMARLVN+IS+QNG++++   
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---

Query:  ----QMVKLRQQRSWRPSLQSIPEII
            QMVKLRQQRSWRPSLQSIPEII
Subjt:  ----QMVKLRQQRSWRPSLQSIPEII

KAG7033944.1 hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3569.05Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---
        MGNCCR QSSTP +   NRR  P +N RQR+   SS  CS+T K  KEGN++E+KIRMTKKEL+ELVGWLNMADSSFE VMARLVN+IS+QNG++++   
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---

Query:  ----QMVKLRQQRSWRPSLQSIPEII
            QMVKLRQQRSWRPSLQSIPEII
Subjt:  ----QMVKLRQQRSWRPSLQSIPEII

XP_008441100.1 PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo]1.8e-3874.17Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM
        MGNCC+ Q STP     +RRTPP +NHRQR+    S  CS      KE NL+EVKIRMTKKELEELVGWLNMADSSFEHVMARLVN+I+DQNG+ NNDQ+
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM

Query:  VKLRQQRSWRPSLQSIPEII
        VKLRQQRSWRPSLQSIPEII
Subjt:  VKLRQQRSWRPSLQSIPEII

XP_022977330.1 uncharacterized protein LOC111477681 [Cucurbita maxima]1.7e-3670.63Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNG-------
        MGNCCR QSSTP +  G+RR  P +N RQR+    S  CS+T K  KEGNL+E+KIRMTKKEL+EL+GWLNMADSSFE VMARLVN+ISDQNG       
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNG-------

Query:  ENNDQMVKLRQQRSWRPSLQSIPEII
        EN  QMVKLRQQRSWRPSLQSIPEII
Subjt:  ENNDQMVKLRQQRSWRPSLQSIPEII

XP_023544016.1 uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo]9.1e-3567.46Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---
        MGNCCR QSSTP +  G+RR  P +N  QR  R  ++ CS+T K  KEGNL+E+KIRMTKKEL+ELVGWLNMADSSFE VMARLVN+IS+ NG++++   
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENND---

Query:  ----QMVKLRQQRSWRPSLQSIPEII
            QMVKLRQQRSWRPSLQSIPEII
Subjt:  ----QMVKLRQQRSWRPSLQSIPEII

TrEMBL top hitse value%identityAlignment
A0A0A0KHU7 Uncharacterized protein9.9e-3569.17Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM
        MGNCC++QSSTP ME  +  TPP++NH QR+ +  S          KE NL+EVKIRMTKKEL+ELVGWLNMADSSFE VMARLVN+I+ QNG+ NNDQ+
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM

Query:  VKLRQQRSWRPSLQSIPEII
        VKLRQQRSWRPSLQSIPE+I
Subjt:  VKLRQQRSWRPSLQSIPEII

A0A1S3B2N5 uncharacterized protein LOC1034853268.6e-3974.17Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM
        MGNCC+ Q STP     +RRTPP +NHRQR+    S  CS      KE NL+EVKIRMTKKELEELVGWLNMADSSFEHVMARLVN+I+DQNG+ NNDQ+
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM

Query:  VKLRQQRSWRPSLQSIPEII
        VKLRQQRSWRPSLQSIPEII
Subjt:  VKLRQQRSWRPSLQSIPEII

A0A5D3CNX5 Uncharacterized protein8.6e-3974.17Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM
        MGNCC+ Q STP     +RRTPP +NHRQR+    S  CS      KE NL+EVKIRMTKKELEELVGWLNMADSSFEHVMARLVN+I+DQNG+ NNDQ+
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGE-NNDQM

Query:  VKLRQQRSWRPSLQSIPEII
        VKLRQQRSWRPSLQSIPEII
Subjt:  VKLRQQRSWRPSLQSIPEII

A0A6J1IM02 uncharacterized protein LOC1114776818.1e-3770.63Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNG-------
        MGNCCR QSSTP +  G+RR  P +N RQR+    S  CS+T K  KEGNL+E+KIRMTKKEL+EL+GWLNMADSSFE VMARLVN+ISDQNG       
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNG-------

Query:  ENNDQMVKLRQQRSWRPSLQSIPEII
        EN  QMVKLRQQRSWRPSLQSIPEII
Subjt:  ENNDQMVKLRQQRSWRPSLQSIPEII

A0A6J1KIA5 uncharacterized protein LOC1114954857.1e-0938.28Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNL-----------KEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIIS
        MGNCCRSQSST      +     W +   +  RG     S++  DP++  L            +VKI+MTK+ELE+LV  L +   S E V+ R++N   
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNL-----------KEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIIS

Query:  DQNGENNDQMVKLRQQRSWRPSLQSIPE
        +  GE++         RSWRPSLQSIPE
Subjt:  DQNGENNDQMVKLRQQRSWRPSLQSIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.3.6e-0530.47Show/hide
Query:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNL----------KEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISD
        MGNC R +S    M +       +    +       HY S T +D K   +           E+KIR+TKK+L +L+  +N+ D +F+        +   
Subjt:  MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNL----------KEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISD

Query:  QNGENNDQMVKLRQQRSWRPSLQSIPEI
            NN    +  QQR WRP LQSIPE+
Subjt:  QNGENNDQMVKLRQQRSWRPSLQSIPEI

AT4G21920.1 unknown protein1.4e-0429.01Show/hide
Query:  MGNC-CRSQSSTPAMEYGNRRTPPWRNHRQR------------KPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNI
        MGNC C ++ +T +    +  +   R  R+R            K  G +   +ST         +E+KIR+TKKELE+L+  + +   + E ++++L+  
Subjt:  MGNC-CRSQSSTPAMEYGNRRTPPWRNHRQR------------KPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNI

Query:  ISDQNGENNDQMVKLRQQRSWRPSLQSIPEI
          DQ G +   +    Q   W+P LQSIPE+
Subjt:  ISDQNGENNDQMVKLRQQRSWRPSLQSIPEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACTGTTGCAGAAGTCAATCCTCCACTCCGGCGATGGAATACGGCAACCGGAGGACTCCGCCGTGGAGGAACCACCGTCAGAGAAAGCCTAGAGGTAGTTCTCA
TTATTGTTCTAGTACGCACAAGGATCCAAAAGAAGGTAATTTAAAAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGG
ATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTTAACATTATTAGCGATCAAAACGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAACAACGTTCATGGAGGCCT
TCTTTGCAAAGCATTCCTGAGATAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACTGTTGCAGAAGTCAATCCTCCACTCCGGCGATGGAATACGGCAACCGGAGGACTCCGCCGTGGAGGAACCACCGTCAGAGAAAGCCTAGAGGTAGTTCTCA
TTATTGTTCTAGTACGCACAAGGATCCAAAAGAAGGTAATTTAAAAGAGGTGAAAATAAGGATGACAAAGAAGGAGCTTGAAGAATTGGTTGGATGGTTAAACATGGCGG
ATTCAAGCTTTGAACATGTTATGGCTCGCCTTGTTAACATTATTAGCGATCAAAACGGTGAAAATAATGACCAAATGGTGAAATTGCGTCAACAACGTTCATGGAGGCCT
TCTTTGCAAAGCATTCCTGAGATAATTTGA
Protein sequenceShow/hide protein sequence
MGNCCRSQSSTPAMEYGNRRTPPWRNHRQRKPRGSSHYCSSTHKDPKEGNLKEVKIRMTKKELEELVGWLNMADSSFEHVMARLVNIISDQNGENNDQMVKLRQQRSWRP
SLQSIPEII