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ClCG01G022080 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G022080
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPatatin
Genome locationCG_Chr01:35689966..35690313
RNA-Seq ExpressionClCG01G022080
SyntenyClCG01G022080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603769.1 hypothetical protein SDJN03_04378, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4986.09Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        MSRSRSLSEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  I+ DA RRSD KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDDFPI
        IPGF YRILK DFPI
Subjt:  IPGFGYRILKDDFPI
XP_008441098.1 PREDICTED: uncharacterized protein LOC103485325 [Cucumis melo]2.1e-5292.24Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SH I  +ALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
XP_011658506.1 uncharacterized protein LOC105436036 [Cucumis sativus]1.8e-5190.52Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFTKLELERHG SH I+ +ALRRSDS+GSFWLLSLTWKWKKRK NNG+LPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
XP_022977336.1 uncharacterized protein LOC111477686 [Cucurbita maxima]8.2e-4985.22Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        MSRSRS SEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  I+ DA RRSD KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDDFPI
        IPGF YRILK DFPI
Subjt:  IPGFGYRILKDDFPI
XP_038882225.1 uncharacterized protein LOC120073447 [Benincasa hispida]6.3e-5796.52Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        MSRSRS SEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSH I+ DALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDDFPI
        IPGFGYRILKDDFPI
Subjt:  IPGFGYRILKDDFPI
TrEMBL top hitse value%identityAlignment
A0A0A0KL84 Uncharacterized protein8.6e-5290.52Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFTKLELERHG SH I+ +ALRRSDS+GSFWLLSLTWKWKKRK NNG+LPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
A0A1S3B3D8 uncharacterized protein LOC1034853251.0e-5292.24Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SH I  +ALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
A0A5D3CRM5 Uncharacterized protein1.0e-5292.24Show/hide
Query:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN
        MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SH I  +ALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNI SAVEFSKSNRFN
Subjt:  MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFN

Query:  GIPGFGYRILKDDFPI
        GIPGFGYRILKDDFPI
Subjt:  GIPGFGYRILKDDFPI
A0A6J1EEE9 uncharacterized protein LOC1114335719.8e-4883.05Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        +SRS S SE+MG VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGS  ++ DA RRSDSK SFWLLSL+WKWKKR+ NNGILPNICSAVE SKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDD---FPI
        IPGFGYRILKDD   FPI
Subjt:  IPGFGYRILKDD---FPI
A0A6J1IJL8 uncharacterized protein LOC1114776864.0e-4985.22Show/hide
Query:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG
        MSRSRS SEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  I+ DA RRSD KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNG
Subjt:  MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNG

Query:  IPGFGYRILKDDFPI
        IPGF YRILK DFPI
Subjt:  IPGFGYRILKDDFPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein5.7e-1643.12Show/hide
Query:  APLAIGTRGTVGSLVMKEIEYFTKL-----ELERHGGSHIINADALR---RSDSKGSFWLLSLTWKWKKRKNNNG---ILPNICSAVEFSKSNRFNGIPG
        AP+AIGTRGT+GSLV KEI+YF        + +   G+   N +  +   RS S+   W     W+ KKR+   G     P++CSAVE S  NR   +PG
Subjt:  APLAIGTRGTVGSLVMKEIEYFTKL-----ELERHGGSHIINADALR---RSDSKGSFWLLSLTWKWKKRKNNNG---ILPNICSAVEFSKSNRFNGIPG

Query:  FGYRILKDD
        F YRILK D
Subjt:  FGYRILKDD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGGTGGTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCAC
CAAGCTTGAGCTCGAACGCCATGGCGGCTCTCACATTATAAATGCAGATGCTTTGAGAAGAAGCGATTCTAAAGGAAGCTTTTGGCTTTTGTCCTTGACTTGGAAATGGA
AGAAGAGAAAAAACAACAATGGGATTCTCCCTAACATCTGTTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGCTTCGGTTACAGAATTCTCAAA
GATGACTTTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGGTGGTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCAC
CAAGCTTGAGCTCGAACGCCATGGCGGCTCTCACATTATAAATGCAGATGCTTTGAGAAGAAGCGATTCTAAAGGAAGCTTTTGGCTTTTGTCCTTGACTTGGAAATGGA
AGAAGAGAAAAAACAACAATGGGATTCTCCCTAACATCTGTTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGCTTCGGTTACAGAATTCTCAAA
GATGACTTTCCCATTTGA
Protein sequenceShow/hide protein sequence
MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILK
DDFPI