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ClCG01G024135 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G024135
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionS-protein homolog
Genome locationCG_Chr01:37295856..37296302
RNA-Seq ExpressionClCG01G024135
SyntenyClCG01G024135
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052584.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]1.4e-6481.43Show/hide
Query:  LISCVVVITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPER
        L+  VVV+ AMM +SC  GSKTMPP SSWKVV+F+QLSPGQ+L+VHCKSK++DLG+H LRVGE FSWKFKENLFSTTRFWC+LTSSSKK VTMDVFWPER
Subjt:  LISCVVVITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPER

Query:  HNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWDN
        H+WLAYRCNY TCIWVAQDDGIY+VNV  NLREFVRKWDN
Subjt:  HNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWDN

KAE7997944.1 hypothetical protein FH972_002530 [Carpinus fangiana]1.7e-3051.72Show/hide
Query:  PLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHN-WLAYRCNYETCIWVAQDDGIY
        PL  W V +++ +  G+ L +HCKSK+DDLG   L VG+D SW FKEN   TT +WC +    K   T+DVFW ER N WL+YRCN++ CIW+A+DDGIY
Subjt:  PLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHN-WLAYRCNYETCIWVAQDDGIY

Query:  LVNVPMNLREFVRKWD
        L  +P N  +FV KW+
Subjt:  LVNVPMNLREFVRKWD

KAE8647731.1 hypothetical protein Csa_003821 [Cucumis sativus]1.1e-5676.12Show/hide
Query:  VITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAY
        V+ AMM + CW GSKTM PLS WKVVIF QL+PG+ L VHCKSK++DLG+H L+V ++FSWKFKENLFSTT FWCTLT+SSKK+VTMDVFWPERHNWLA 
Subjt:  VITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAY

Query:  RCNYETCIWVAQDDGIYLVNVPMNLREFVRKWDN
        RC+Y TCIWVAQDDGIYLVN   N REFVRKWD+
Subjt:  RCNYETCIWVAQDDGIYLVNVPMNLREFVRKWDN

KAG7034676.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-4869.35Show/hide
Query:  AMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCN
        +MM     AGSKTMPPLS WKVVIF+QL+PGQTL  HCKSK DDLGDH L+VGE +SW+FKEN+ STTRFWCT T+S  K++ MDVFWPE H WLAYRCN
Subjt:  AMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCN

Query:  YETCIWVAQDDGIYLVNVPMNLRE
          +C+WVAQDDG+YL N+P   RE
Subjt:  YETCIWVAQDDGIYLVNVPMNLRE

XP_034229618.1 S-protein homolog 1-like [Prunus dulcis]3.2e-2945.99Show/hide
Query:  CVVVITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPE-RHN
        CV ++   ++  C  GS      ++W V + + LS G+TL  HCKSK+DDLG+  L  G +F+W FKEN F TT +WC + S+ +K   +DVFW E  H+
Subjt:  CVVVITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPE-RHN

Query:  WLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD
        WL YRCN++ CIW+A+DDGIY+  +P N  EF  KW+
Subjt:  WLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD

TrEMBL top hitse value%identityAlignment
A0A5A7UB41 S-protein homolog6.7e-6581.43Show/hide
Query:  LISCVVVITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPER
        L+  VVV+ AMM +SC  GSKTMPP SSWKVV+F+QLSPGQ+L+VHCKSK++DLG+H LRVGE FSWKFKENLFSTTRFWC+LTSSSKK VTMDVFWPER
Subjt:  LISCVVVITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPER

Query:  HNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWDN
        H+WLAYRCNY TCIWVAQDDGIY+VNV  NLREFVRKWDN
Subjt:  HNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWDN

A0A5E4EJG4 S-protein homolog1.6e-2945.99Show/hide
Query:  CVVVITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPE-RHN
        CV ++   ++  C  GS      ++W V + + LS G+TL  HCKSK+DDLG+  L  G +F+W FKEN F TT +WC + S+ +K   +DVFW E  H+
Subjt:  CVVVITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPE-RHN

Query:  WLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD
        WL YRCN++ CIW+A+DDGIY+  +P N  EF  KW+
Subjt:  WLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD

A0A5N6QHU0 S-protein homolog8.2e-3151.72Show/hide
Query:  PLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHN-WLAYRCNYETCIWVAQDDGIY
        PL  W V +++ +  G+ L +HCKSK+DDLG   L VG+D SW FKEN   TT +WC +    K   T+DVFW ER N WL+YRCN++ CIW+A+DDGIY
Subjt:  PLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHN-WLAYRCNYETCIWVAQDDGIY

Query:  LVNVPMNLREFVRKWD
        L  +P N  +FV KW+
Subjt:  LVNVPMNLREFVRKWD

A0A6J1ESA0 S-protein homolog4.5e-2953.04Show/hide
Query:  PLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHN-WLAYRCNYETCIWVAQDDGIY
        P  SW+VVI +  S  Q L+VHCKS +DDLG H ++V +D+ WKFK NL+ +TRFWCT   S    ++ DVFWPE  + WL  RC Y +CIWVA+D+GIY
Subjt:  PLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHN-WLAYRCNYETCIWVAQDDGIY

Query:  LVNVPMNLREFVRKW
        L N P N  E + KW
Subjt:  LVNVPMNLREFVRKW

A0A6P4ABD6 S-protein homolog2.6e-2944.53Show/hide
Query:  VVITAMMNQSCWAGSK--TMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPE-RHN
        V++ + M++ C   ++  T  PL  + + I + LS G+ L +HC+SK+DDLG+H L  G  F+W F+ N + TTRFWC       +    DVFWPE RH 
Subjt:  VVITAMMNQSCWAGSK--TMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPE-RHN

Query:  WLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD
        WL  RC+Y+ CIW A+DDG YL NVP+N  E + KW+
Subjt:  WLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 11.5e-2134.44Show/hide
Query:  MNIVMNYGLISCVVVITAMMNQSCWAGSKT----MPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSK
        MN +  + L  C  +     +     G+ T    +P +S W+V + + L+ G+TL +HCKSK DDLG+  L+    FSW F EN+  +T FWC + +   
Subjt:  MNIVMNYGLISCVVVITAMMNQSCWAGSKT----MPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSK

Query:  KQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD
          + ++VFW +    L +RC ++ CIW A+ DG+YL N         RKW+
Subjt:  KQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD

P0DN92 S-protein homolog 247.0e-1140.74Show/hide
Query:  LSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIY
        L +HCKS++DDLG H L  GE F WKF  N   +T ++C  +    K+   +++   R N   YRC    C W A+ DGIY
Subjt:  LSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIY

P0DN93 S-protein homolog 297.7e-1034.88Show/hide
Query:  PLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNY
        P +   V + + +SP  TL++ C+SK+DDLG+H L  G+ F WKF+ + F TT F C    ++  +   D +  +R     Y CN+
Subjt:  PLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNY

Q2HQ46 S-protein homolog 749.7e-2133.33Show/hide
Query:  MNIVMNYGLISCVVVITAMMNQSCWAGSKT----MPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSK
        MN +  + L  C  ++    +      + T    +P +S W+V + + L+ G+TL +HCKSK +DLGD  L+  + FSW F EN+  +T FWC + S   
Subjt:  MNIVMNYGLISCVVVITAMMNQSCWAGSKT----MPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSK

Query:  KQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKW
          + + VFW +    L +RC+++ C+W A++DG+YL N  +       KW
Subjt:  KQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKW

Q9FI84 S-protein homolog 273.5e-1036.08Show/hide
Query:  LSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIY-LVNVPMNLREFVRKW
        L +HCKSK+DDLG H  + GE + WKF  N  ++T ++C  +     +   D+   ER     YRC    C W A+ D +Y   N+P  +  F  KW
Subjt:  LSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIY-LVNVPMNLREFVRKW

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family9.3e-1134.74Show/hide
Query:  VVIFHQLSP--GQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIY
        + + ++L+P     L VHCKSKN+D+G  +L++GE  S+ FK N + TT FWC L      +    +   +     A   +  +  W+A+DDGIY
Subjt:  VVIFHQLSP--GQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIY

AT4G16295.1 S-protein homologue 11.1e-2234.44Show/hide
Query:  MNIVMNYGLISCVVVITAMMNQSCWAGSKT----MPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSK
        MN +  + L  C  +     +     G+ T    +P +S W+V + + L+ G+TL +HCKSK DDLG+  L+    FSW F EN+  +T FWC + +   
Subjt:  MNIVMNYGLISCVVVITAMMNQSCWAGSKT----MPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSK

Query:  KQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD
          + ++VFW +    L +RC ++ CIW A+ DG+YL N         RKW+
Subjt:  KQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWD

AT4G29035.1 Plant self-incompatibility protein S1 family6.9e-2233.33Show/hide
Query:  MNIVMNYGLISCVVVITAMMNQSCWAGSKT----MPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSK
        MN +  + L  C  ++    +      + T    +P +S W+V + + L+ G+TL +HCKSK +DLGD  L+  + FSW F EN+  +T FWC + S   
Subjt:  MNIVMNYGLISCVVVITAMMNQSCWAGSKT----MPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSK

Query:  KQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKW
          + + VFW +    L +RC+++ C+W A++DG+YL N  +       KW
Subjt:  KQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKW

AT5G04350.1 Plant self-incompatibility protein S1 family1.4e-1431.86Show/hide
Query:  CWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYE----
        C   S     +   KVV+ +QL   + L VHC+SK+DDLG+H L++G+D+ + F +N++ TT F C +      +  +D        ++AY  ++     
Subjt:  CWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYE----

Query:  -TCIWVAQDDGIY
         +C W+ ++DGIY
Subjt:  -TCIWVAQDDGIY

AT5G06020.1 Plant self-incompatibility protein S1 family2.5e-1136.08Show/hide
Query:  LSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIY-LVNVPMNLREFVRKW
        L +HCKSK+DDLG H  + GE + WKF  N  ++T ++C  +     +   D+   ER     YRC    C W A+ D +Y   N+P  +  F  KW
Subjt:  LSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHNWLAYRCNYETCIWVAQDDGIY-LVNVPMNLREFVRKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTGTGATGAACTATGGTCTCATTTCATGTGTTGTAGTGATAACAGCGATGATGAATCAATCATGTTGGGCAGGCTCAAAAACTATGCCACCATTGAGTTCATG
GAAGGTGGTGATTTTTCACCAATTGAGTCCAGGCCAAACTTTATCTGTTCATTGCAAATCAAAAAATGACGATTTGGGCGATCATTTTTTGCGGGTGGGTGAAGATTTTT
CATGGAAATTCAAAGAGAATCTGTTTTCAACTACTCGTTTTTGGTGTACTTTAACAAGTTCATCAAAGAAACAAGTGACTATGGATGTGTTTTGGCCAGAGAGACACAAT
TGGCTTGCTTATAGATGCAATTATGAGACTTGTATTTGGGTTGCTCAAGATGATGGTATTTATTTGGTGAATGTTCCCATGAATTTGAGGGAGTTTGTGCGTAAATGGGA
CAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTGTGATGAACTATGGTCTCATTTCATGTGTTGTAGTGATAACAGCGATGATGAATCAATCATGTTGGGCAGGCTCAAAAACTATGCCACCATTGAGTTCATG
GAAGGTGGTGATTTTTCACCAATTGAGTCCAGGCCAAACTTTATCTGTTCATTGCAAATCAAAAAATGACGATTTGGGCGATCATTTTTTGCGGGTGGGTGAAGATTTTT
CATGGAAATTCAAAGAGAATCTGTTTTCAACTACTCGTTTTTGGTGTACTTTAACAAGTTCATCAAAGAAACAAGTGACTATGGATGTGTTTTGGCCAGAGAGACACAAT
TGGCTTGCTTATAGATGCAATTATGAGACTTGTATTTGGGTTGCTCAAGATGATGGTATTTATTTGGTGAATGTTCCCATGAATTTGAGGGAGTTTGTGCGTAAATGGGA
CAACTAA
Protein sequenceShow/hide protein sequence
MNIVMNYGLISCVVVITAMMNQSCWAGSKTMPPLSSWKVVIFHQLSPGQTLSVHCKSKNDDLGDHFLRVGEDFSWKFKENLFSTTRFWCTLTSSSKKQVTMDVFWPERHN
WLAYRCNYETCIWVAQDDGIYLVNVPMNLREFVRKWDN