; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG01G024320 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG01G024320
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDNA-binding protein
Genome locationCG_Chr01:37436753..37443390
RNA-Seq ExpressionClCG01G024320
SyntenyClCG01G024320
Gene Ontology termsGO:0071805 - potassium ion transmembrane transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005774 - vacuolar membrane (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005267 - potassium channel activity (molecular function)
InterPro domainsIPR002836 - PDCD5-like
IPR036883 - PDCD5-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052566.1 DNA-binding protein [Cucumis melo var. makuwa]1.3e-4098.08Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQ+NPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

KAG6594495.1 DNA-binding protein, partial [Cucurbita argyrosperma subsp. sororia]6.4e-4096.15Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQSNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

XP_008439666.1 PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo]1.3e-4098.08Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQ+NPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

XP_031744105.1 DNA-binding protein DDB_G0278111 isoform X1 [Cucumis sativus]1.3e-4098.08Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQ+NPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

XP_038881892.1 DNA-binding protein DDB_G0278111 [Benincasa hispida]2.9e-4097.12Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQ+NPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

TrEMBL top hitse value%identityAlignment
A0A0A0KKK2 Uncharacterized protein6.3e-4198.08Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQ+NPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

A0A1S3AZB0 DNA-binding protein DDB_G02781116.3e-4198.08Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQ+NPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

A0A5D3CSS6 DNA-binding protein6.3e-4198.08Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQ+NPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

A0A6J1EFZ2 DNA-binding protein DDB_G0278111-like3.1e-4096.15Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQSNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

A0A6J1KTQ8 DNA-binding protein DDB_G0278111-like3.1e-4096.15Show/hide
Query:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQSNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTV
        KVT+
Subjt:  KVTV

SwissProt top hitse value%identityAlignment
O14737 Programmed cell death protein 56.5e-1147.56Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKV
        AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L++++ QT K T V
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKV

P56812 Programmed cell death protein 56.5e-1147.56Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKV
        AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI +LE+++ QT K+T V
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKV

Q2HJH9 Programmed cell death protein 58.5e-1147.56Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKV
        AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI +LE+++ QT K+T V
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKV

Q54YS0 DNA-binding protein DDB_G02781111.4e-1654.55Show/hide
Query:  QELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        Q+L   +G G   +PE Q+ QE  R EA ERRQ +L QIL+  ARERLSRI +VKPEK+R +ED+I+RAAQ GQ+ E+V + +LI+LLEQ++ +T K T
Subjt:  QELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Q5RBT0 Programmed cell death protein 56.5e-1147.56Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKV
        AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L++++ QT K T V
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKV

Arabidopsis top hitse value%identityAlignment
AT1G29850.1 double-stranded DNA-binding family protein9.3e-3783.02Show/hide
Query:  MQELMAQRGM---GSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
        MQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QTT
Subjt:  MQELMAQRGM---GSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT

Query:  KQTKVT
        KQTKVT
Subjt:  KQTKVT

AT1G29850.2 double-stranded DNA-binding family protein1.2e-3682.24Show/hide
Query:  MQELMAQRGM----GSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQT
        MQELMA++GM    G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QT
Subjt:  MQELMAQRGM----GSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQT

Query:  TKQTKVT
        TKQTKVT
Subjt:  TKQTKVT

AT1G29850.3 double-stranded DNA-binding family protein1.1e-3783.33Show/hide
Query:  MQELMAQRGM---GSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
        MQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QTT
Subjt:  MQELMAQRGM---GSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT

Query:  KQTKVTVS
        KQTKVTVS
Subjt:  KQTKVTVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAACTCATGGCCCAGCGTGGCATGGGAAGCCAAAGTAATCCTGAACAACAGAAGGCCCAGGAAGAAGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCT
TAGTCAGATTCTGTCGATGCAAGCGAGAGAAAGACTTTCTCGAATTGCATTGGTTAAACCTGAGAAGGCAAGAGGTGTCGAAGATGTTATACTGAGAGCTGCACAGATGG
GCCAAATTGTTGAAAAGGTCTCTGAAGAGAGGCTTATAACATTGCTAGAACAGATCAACAATCAGACCACAAAACAGACGAAAGTCACTGTGAGTATTCATTGCTTACTT
CATCGATACAAAGGCGTCGAAGCGTTCTTGAGGATGACGATTAGCAAACTGCCACAGCTCCTCGTAGTTAGCTCTCTTGATGATGGGTTGCATTGGGTTGCTGTTTACAA
GTTAAAAGATGGAAGTGCATTTAGTACCATCTTCTGTTTCAATATAATTGTGGAAGTTAACAAGTACAATCTATATAAAGATATAACAAGAAACCTGGAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
CTTTTTCATTTGTTTTTGTGTCGTCGTACAAAACTCTCAAATTGAAGACCAATATTTTCTATAATTTACCTAAAAAAAGCAGATTCCAAAATAACTTGAACAATATTTTA
AATTACAGGCAACCTTGCCATACGAGCTACAGGGAAAAAGTGGGTCGCGTCCCATCAACGCAACCAAGGAAATCCGTCGCTTCGTTTTCTCCTTTGCAGCTTATAGGGAA
ATAATTCAACTGTAGTTCTACTAACTGCAACCTCCATCCTCGAAGCAATGTTTGTGCCAAATGAAGCGACACTGGATGGTTTATATATCTCAATAATGGGTAAAGGATGA
TCCTGAACTAGAAGCAATCAGGCAGAGAAGAATGCAGGAACTCATGGCCCAGCGTGGCATGGGAAGCCAAAGTAATCCTGAACAACAGAAGGCCCAGGAAGAAGCTAGGA
GTGAAGCAGAGGAACGCAGACAAATGATGCTTAGTCAGATTCTGTCGATGCAAGCGAGAGAAAGACTTTCTCGAATTGCATTGGTTAAACCTGAGAAGGCAAGAGGTGTC
GAAGATGTTATACTGAGAGCTGCACAGATGGGCCAAATTGTTGAAAAGGTCTCTGAAGAGAGGCTTATAACATTGCTAGAACAGATCAACAATCAGACCACAAAACAGAC
GAAAGTCACTGTGAGTATTCATTGCTTACTTCATCGATACAAAGGCGTCGAAGCGTTCTTGAGGATGACGATTAGCAAACTGCCACAGCTCCTCGTAGTTAGCTCTCTTG
ATGATGGGTTGCATTGGGTTGCTGTTTACAAGTTAAAAGATGGAAGTGCATTTAGTACCATCTTCTGTTTCAATATAATTGTGGAAGTTAACAAGTACAATCTATATAAA
GATATAACAAGAAACCTGGAAAAGTAG
Protein sequenceShow/hide protein sequence
MQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTVSIHCLL
HRYKGVEAFLRMTISKLPQLLVVSSLDDGLHWVAVYKLKDGSAFSTIFCFNIIVEVNKYNLYKDITRNLEK