CuGenDBv2

Gene ID	ClCG02G001850
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	sigma intracellular receptor 2-like
Genome location	CG_Chr02:1856652..1858716
RNA-Seq Expression	ClCG02G001850
Synteny	ClCG02G001850
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR016964 - Sigma intracellular receptor 2 IPR033118 - EXPERA domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7011913.1 Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-70

86.75

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGALLKLVD LLFL FLLLA +SPLIDFQVIFP+TLFP FLIDLKT YIRQSGDY+MA+SP FVVGL+WLELLFQWPL+LLNLYA LA+K WYNTTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA
        GVS+VASMSAI+GEMVGSNRAS TL TIYYPFLGLGVLAMLRGLV CSSKATIT T+PSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

XP_004144492.1 sigma intracellular receptor 2 [Cucumis sativus]

2.8e-74

87.95

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGA LKL+DVLLFL+FL+LA +SPLIDFQ+IFP TLFPDFLIDLKTSY RQ GDYLMAESPPF+VGL+WLEL FQWP+MLLNLYAFLASKPWYNTTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA
        GVSVV+SMSA++GEMVGSNRASTTL TIYYPFLGLGVLAMLRGLVPCSSKA IT TRPSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

XP_022952624.1 sigma intracellular receptor 2-like [Cucurbita moschata]

1.3e-71

87.95

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGALLKLVD LLFL FLLLA +SPLIDFQVIFP+TLFP FLIDLKT YIRQSGDY+MA+SP FVVGL+WLELLFQWPL+LLNLYAFLA+K WYNTTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA
        GVS+VASMSAI+GEMVGSNRAS TL TIYYPFLGLGVLAMLRGLV CSSKATIT TRPSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

XP_022969277.1 sigma intracellular receptor 2-like [Cucurbita maxima]

2.6e-72

88.55

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGALLKLVD LLFL FLLLA +SPLIDFQVIFPQTLFP FLIDLKT YIRQSGDY+MA+SP FVV L+WLELLFQWPL+LLNLYAFLA+KPWYNTTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA
        GVS+VASMSAI+GEMVGSNRAS TL TIYYPFLGLGVLAMLRGLV CSSKATIT TRPSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

XP_038887415.1 sigma intracellular receptor 2 [Benincasa hispida]

3.0e-76

92.77

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGALLKLVD LLFLVFLLLAFISPLIDFQ+IFPQTLFPDFLIDLK SYI Q GDYLMAESPPFVVGL+WLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA
        GVSVVASMSAI+GEMVGSNRASTTL TIYYPFLG GVLAMLRGLV CSSKAT+T TRPSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5K2 EXPERA domain-containing protein

1.4e-74

87.95

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGA LKL+DVLLFL+FL+LA +SPLIDFQ+IFP TLFPDFLIDLKTSY RQ GDYLMAESPPF+VGL+WLEL FQWP+MLLNLYAFLASKPWYNTTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA
        GVSVV+SMSA++GEMVGSNRASTTL TIYYPFLGLGVLAMLRGLVPCSSKA IT TRPSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

A0A5D3C9W7 Transmembrane protein 97-like

9.1e-71

84.43

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGA LKL+D LLFL+FL+LA ISP IDFQ+IFPQTLFPDFLIDLK SY+RQ GDY+MAESPPF+VGL+WLEL FQWPLMLLNLYAFLASKPWY TTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATIT-STRPSNGRKKRA
        GVSVV SMSA++GEMVGSNRASTTL  +YYPF+GLGVLAMLRGLVPCSSKA IT +TRPSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATIT-STRPSNGRKKRA

A0A6J1GM86 sigma intracellular receptor 2-like

6.3e-72

87.95

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGALLKLVD LLFL FLLLA +SPLIDFQVIFP+TLFP FLIDLKT YIRQSGDY+MA+SP FVVGL+WLELLFQWPL+LLNLYAFLA+K WYNTTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA
        GVS+VASMSAI+GEMVGSNRAS TL TIYYPFLGLGVLAMLRGLV CSSKATIT TRPSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

A0A6J1HVX1 sigma intracellular receptor 2-like

1.3e-72

88.55

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGALLKLVD LLFL FLLLA +SPLIDFQVIFPQTLFP FLIDLKT YIRQSGDY+MA+SP FVV L+WLELLFQWPL+LLNLYAFLA+KPWYNTTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA
        GVS+VASMSAI+GEMVGSNRAS TL TIYYPFLGLGVLAMLRGLV CSSKATIT TRPSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

A0A6J1JIQ0 sigma intracellular receptor 2-like

2.2e-64

78.31

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGALLKLVD LLFL FLLLA + PLIDFQ +FP++ +PDF+IDLK+ Y+ QSGDYLM E+P FVVGLIW ELLFQWPL+ LNLYAFL+SK W+NTTCLIY
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA
        GVS+V+SMSA MGE+VGSNRAS TL TIY+PF+GLGVLAMLRGLVPCSSKATI   RPSNGRKKRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

SwissProt top hits

e value

%identity

Alignment

Q6DFQ5 Sigma intracellular receptor 2

2.0e-06

27.27

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFL-ASKPWYNTTCLI
        M    +L++ + F  F     I+ L+D Q + P +L+P  L+DL   Y     D+LMA  PP+    ++ E + Q P   +  YAF      W     ++
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFL-ASKPWYNTTCLI

Query:  YGVSVVASMSAIMGEMVG------------SNRASTTLKTIYYPFLGLGVLAML
        Y   V  ++ AI+G ++             + +   TL +IY P+L + VL +L
Subjt:  YGVSVVASMSAIMGEMVG------------SNRASTTLKTIYYPFLGLGVLAML

Arabidopsis top hits

e value

%identity

Alignment

AT1G05210.1 Transmembrane protein 97, predicted

5.2e-42

53.94

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGAL KL+DV LF+ F+ +A I+PLID Q   P  ++P FL DLK+ YI   GDYL+ E P F+VGL+W ELLF WPL + N+YA LA K W+ TTCL+Y
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKR
        G S+V SM+AI+G+M+GS +AS  L  +Y PF+G G+LA+LRGLV  S+K T +S + S    +R
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKR

AT1G05220.1 Transmembrane protein 97, predicted

6.7e-34

47.77

Show/hide

Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGAL KL+++ LF  F L+A   PL++ Q++FP  ++P  L DLK  Y  +  DYL  E P F VGL+W E++F  PL ++N+YA L SK W+ TT L+Y
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTR
        G S + SM+AI+G+M+GS + +  L   Y PF+GL +LAMLRGLV CS+K +    R
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTR

AT1G05220.2 Transmembrane protein 97, predicted

6.7e-34

47.77

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGAL KL+++ LF  F L+A   PL++ Q++FP  ++P  L DLK  Y  +  DYL  E P F VGL+W E++F  PL ++N+YA L SK W+ TT L+Y
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTR
        G S + SM+AI+G+M+GS + +  L   Y PF+GL +LAMLRGLV CS+K +    R
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTR

AT2G32380.1 Transmembrane protein 97, predicted

2.2e-40

52.38

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Query:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY
        MGA  KL+D +LFL F L+A I+PLID Q   P  +FP F++DL   YI + GDYL+ E P F+VGL+W ELL  WPL ++N+YA LA K W+ TT ++Y
Subjt:  MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIY

Query:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKA-TITSTRPS-NGRKKRA
        G SVV SM+AI+GEM+GS +AS  L  +Y PF+G+G+LA+LRGL+  S+K+      RP+   R+KRA
Subjt:  GVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKA-TITSTRPS-NGRKKRA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGCGCTCTTCTCAAGCTCGTCGACGTCTTACTATTCCTCGTCTTCCTTCTTCTCGCATTCATATCGCCTCTAATCGATTTCCAGGTTATTTTCCCTCAAACCCTTTT
CCCTGATTTTCTCATCGATCTTAAGACCTCCTACATCCGCCAATCCGGGGATTATTTAATGGCCGAATCCCCTCCCTTCGTCGTTGGCCTCATTTGGCTCGAGCTTCTCT
TTCAATGGCCTCTTATGCTGCTCAATCTCTACGCCTTCTTGGCTTCCAAGCCATGGTACAATACCACTTGCTTGATCTATGGCGTTTCTGTTGTGGCTTCCATGTCTGCT
ATAATGGGTGAAATGGTTGGGTCGAACCGAGCATCTACTACTCTGAAGACAATATACTACCCCTTCTTGGGTTTGGGAGTTCTGGCCATGCTACGCGGGCTAGTACCGTG
TTCGAGCAAGGCTACGATCACCAGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGA

mRNA sequence

Show/hide mRNA sequence

AAGATCCCCATCTCATCCAACAAAATTATCAATCGCTCTGTTTCGCGGACATTGTGAGAAGAAAGCTCAGTGGAAAACATGGGCGCTCTTCTCAAGCTCGTCGACGTCTT
ACTATTCCTCGTCTTCCTTCTTCTCGCATTCATATCGCCTCTAATCGATTTCCAGGTTATTTTCCCTCAAACCCTTTTCCCTGATTTTCTCATCGATCTTAAGACCTCCT
ACATCCGCCAATCCGGGGATTATTTAATGGCCGAATCCCCTCCCTTCGTCGTTGGCCTCATTTGGCTCGAGCTTCTCTTTCAATGGCCTCTTATGCTGCTCAATCTCTAC
GCCTTCTTGGCTTCCAAGCCATGGTACAATACCACTTGCTTGATCTATGGCGTTTCTGTTGTGGCTTCCATGTCTGCTATAATGGGTGAAATGGTTGGGTCGAACCGAGC
ATCTACTACTCTGAAGACAATATACTACCCCTTCTTGGGTTTGGGAGTTCTGGCCATGCTACGCGGGCTAGTACCGTGTTCGAGCAAGGCTACGATCACCAGCACCAGAC
CATCAAATGGCAGGAAAAAGAGGGCTTGAACGGCCATCCTAAATCGCCAAAGGAGTGCTTGTATTGCCTTTTCTGCAGCCGATTTGGTTTAGTTAGTATTAACTGAGGAC
GACCTTACTTGAACATGATCTGTTCTAAAGGTTGTACAACTGTGTCATTGAGTTCTAAAGTTAGTATTAACCGAGGATGTTGGTTCCTTTAGGTAATTGGTTCAACTTTG
GCTATGGATCATTTAGCATTTGCCCCTTTTAACATTCCATTAGTCTTTCATTCTATGAATGGTAATGGTTCAAAGGGACCCTTTTGAATTTTGAATGATAATAAAAGCCA
ATGAGCTTAAGATTTGAGAATGG

Protein sequence

Show/hide protein sequence

MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSA
IMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

ClCG02G001850 (gene) of Watermelon (Charleston Gray) v2.5 genome