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ClCG02G001930 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G001930
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionThiF domain-containing protein
Genome locationCG_Chr02:1964428..1964799
RNA-Seq ExpressionClCG02G001930
SyntenyClCG02G001930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022864.1 hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-5288.89Show/hide
Query:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS
        MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRV L+SQIYSTRSSSLSP T PIDS LLQVNIVDASP FAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS

Query:  LWFLTSSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLTSSPTNLTPDSPPDPVIEVLGG

XP_008455441.1 PREDICTED: uncharacterized protein LOC103495597 [Cucumis melo]2.2e-5292.68Show/hide
Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRV LVSQIYST SSSL     PIDSGLLQVNIVDASPSFAGRVYGPL LQRKKLLASKSLWF
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF

Query:  LTSSPTNLTPDSPPDPVIEVLGG
        L SSPTNLTPDSPPDPVIEVLGG
Subjt:  LTSSPTNLTPDSPPDPVIEVLGG

XP_022952539.1 uncharacterized protein LOC111455201 [Cucurbita moschata]3.5e-5391.94Show/hide
Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASK-SLW
        MNRRSRRSGNS SETFHKYLKPGALAQIRNSRMIARFNRV LVSQIYSTRSSSLSPST PI SGLLQVNI DASP FAGRVYGPLCLQRKKLLA+K SLW
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASK-SLW

Query:  FLTSSPTNLTPDSPPDPVIEVLGG
        FL SSPTNLTPDSPPDPVI VLGG
Subjt:  FLTSSPTNLTPDSPPDPVIEVLGG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]1.7e-5289.68Show/hide
Query:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS
        MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRV LVSQIYSTRSSSLSP T PIDS LLQVNIVDASP FAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS

Query:  LWFLTSSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLTSSPTNLTPDSPPDPVIEVLGG

XP_038888488.1 uncharacterized protein LOC120078321 [Benincasa hispida]8.8e-5796.75Show/hide
Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRV LVSQIYSTRSSS  PST+PIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF

Query:  LTSSPTNLTPDSPPDPVIEVLGG
        LTSSPTNLTPDSPPDPVIEVLGG
Subjt:  LTSSPTNLTPDSPPDPVIEVLGG

TrEMBL top hitse value%identityAlignment
A0A1S3C0X0 uncharacterized protein LOC1034955971.1e-5292.68Show/hide
Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRV LVSQIYST SSSL     PIDSGLLQVNIVDASPSFAGRVYGPL LQRKKLLASKSLWF
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF

Query:  LTSSPTNLTPDSPPDPVIEVLGG
        L SSPTNLTPDSPPDPVIEVLGG
Subjt:  LTSSPTNLTPDSPPDPVIEVLGG

A0A5D3C9X6 Uncharacterized protein1.1e-5292.68Show/hide
Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRV LVSQIYST SSSL     PIDSGLLQVNIVDASPSFAGRVYGPL LQRKKLLASKSLWF
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWF

Query:  LTSSPTNLTPDSPPDPVIEVLGG
        L SSPTNLTPDSPPDPVIEVLGG
Subjt:  LTSSPTNLTPDSPPDPVIEVLGG

A0A6J1EXJ2 uncharacterized protein LOC1114370924.1e-5288.89Show/hide
Query:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS
        MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRV LVSQIYSTR SSLSP T PIDS LLQVNIVDASP FAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS

Query:  LWFLTSSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLTSSPTNLTPDSPPDPVIEVLGG

A0A6J1GLZ8 uncharacterized protein LOC1114552011.7e-5391.94Show/hide
Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASK-SLW
        MNRRSRRSGNS SETFHKYLKPGALAQIRNSRMIARFNRV LVSQIYSTRSSSLSPST PI SGLLQVNI DASP FAGRVYGPLCLQRKKLLA+K SLW
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASK-SLW

Query:  FLTSSPTNLTPDSPPDPVIEVLGG
        FL SSPTNLTPDSPPDPVI VLGG
Subjt:  FLTSSPTNLTPDSPPDPVIEVLGG

A0A6J1JMJ5 uncharacterized protein LOC1114865631.2e-5188.89Show/hide
Query:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS
        MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRV LVSQIYSTRSSSLSP T PIDS LLQVNIVDASP FAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKS

Query:  LWFLTSSPTNLTPDSPPDPVIEVLGG
        LWFL+SS TNLTPDSPPDPVIEVLGG
Subjt:  LWFLTSSPTNLTPDSPPDPVIEVLGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26960.1 unknown protein4.0e-0731.62Show/hide
Query:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWFLTSSPT
        RS   +++ FH+Y+KPGALAQIRN+R+    +   L   +        S S  PI +   Q   +D  P    ++YGP  + RKKL  ++      S+  
Subjt:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWFLTSSPT

Query:  NLTPDSPPDPVIEVLGG
         L P   P+ ++E + G
Subjt:  NLTPDSPPDPVIEVLGG

AT5G54970.1 unknown protein3.9e-1039.36Show/hide
Query:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVN--IVDASPSFAGRVYGPLCLQRKKLLASKSL
        +S   +S+ FH+YLKPGALAQIRNSR+ AR     +     S     +SPS   +D          +D  P    ++YGP   QRKKL A++S+
Subjt:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVN--IVDASPSFAGRVYGPLCLQRKKLLASKSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGAAGATCCAGAAGATCGGGGAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAACCCGGTGCGCTAGCACAAATTCGCAATTCTCGGATGATCGCC
CGATTCAATCGGGTCAAGTTGGTCTCTCAGATCTACTCCACTCGTTCCTCATCGCTATCTCCTTCCACTGTACCGATCGACTCTGGTCTACTTCAGGTCAACATT
GTTGATGCTTCTCCTTCTTTTGCTGGGAGGGTCTACGGCCCTCTCTGCTTGCAGAGAAAGAAACTTTTGGCATCTAAGTCCTTGTGGTTCCTTACTTCTAGCCCT
ACCAATCTCACGCCTGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCGAAGATCCAGAAGATCGGGGAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAACCCGGTGCGCTAGCACAAATTCGCAATTCTCGGATGATCGCC
CGATTCAATCGGGTCAAGTTGGTCTCTCAGATCTACTCCACTCGTTCCTCATCGCTATCTCCTTCCACTGTACCGATCGACTCTGGTCTACTTCAGGTCAACATT
GTTGATGCTTCTCCTTCTTTTGCTGGGAGGGTCTACGGCCCTCTCTGCTTGCAGAGAAAGAAACTTTTGGCATCTAAGTCCTTGTGGTTCCTTACTTCTAGCCCT
ACCAATCTCACGCCTGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGGTGA
Protein sequenceShow/hide protein sequence
MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVKLVSQIYSTRSSSLSPSTVPIDSGLLQVNIVDASPSFAGRVYGPLCLQRKKLLASKSLWFLTSSP
TNLTPDSPPDPVIEVLGG