CuGenDBv2

Gene ID	ClCG02G003390
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RING-type E3 ubiquitin transferase
Genome location	CG_Chr02:3322785..3326656
RNA-Seq Expression	ClCG02G003390
Synteny	ClCG02G003390
Gene Ontology terms	GO:0005635 - nuclear envelope (cellular component) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029159 - Casein Kinase 2 substrate IPR038985 - At5g43822-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144893.1 uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]

1.2e-90

93.05

Show/hide

Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALL KQMESLQLSFSSIKKTMEELGN+V SMEKIYRD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARN  AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE

XP_008447827.1 PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]

1.9e-91

94.12

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Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE

XP_008447828.1 PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo]

1.2e-88

93.05

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Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE

XP_016900442.1 PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo]

1.2e-88

93.05

Show/hide

Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRS+  LKESIVSALPELFWKARN  AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE

XP_038888509.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida]

2.0e-88

92.51

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Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDE+DRWD+LQVRLISQFQN SSIIGR++LLQDPKNFGSL+GMDGIVDALLGKQMESLQLSFSSIKKTMEELGN+VRSMEKI RD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPS+KQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSAL ELFWKA   RAQDLSSLQQLLVDQPNIRKEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4X9 Uncharacterized protein

6.0e-91

93.05

Show/hide

Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALL KQMESLQLSFSSIKKTMEELGN+V SMEKIYRD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQ+VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARN  AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE

A0A1S3BIA7 uncharacterized protein At5g43822 isoform X1

9.3e-92

94.12

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Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE

A0A1S3BIY0 uncharacterized protein At5g43822 isoform X3

5.6e-89

93.05

Show/hide

Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE

A0A1S4DWT4 uncharacterized protein At5g43822 isoform X2

5.6e-89

93.05

Show/hide

Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDGIV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE
        GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLM+LCNMHRS+  LKESIVSALPELFWKARN  AQDLSSL QLLVDQPNI+KEE
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEE

A0A6J1EQT0 uncharacterized protein At5g43822 isoform X1

1.8e-87

85.79

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Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQF NASSIIGRL++LQDP N+GSLSGMDGIVDALL KQMESLQL FSSI KTMEELGN+VRSMEKIYRD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEEAASLASPLYL
        GKQL+KGGSNQPS KQLQQRVGLKPSLEDCLNGL LLC+MHRSEY+LKES+VSALPELFWK RN  AQDLSSLQQLLVDQPNIRKEE       +YL
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEEAASLASPLYL

SwissProt top hits

e value

%identity

Alignment

Q6NPG7 Uncharacterized protein At5g43822

1.1e-38

44.39

Show/hide

Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEA+++K+Q++FRK K+EM++W+ LQVR +S F+NASSII RL+ +Q+  ++G+L  + GI DA++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEEAASLASPLY
        G QL +  S++   +++++R+G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K   P   DL++LQ L+VDQPNI K+E   +   ++
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEEAASLASPLY

Arabidopsis top hits

e value

%identity

Alignment

AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein

8.2e-40

44.39

Show/hide

Query:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD
        MEA+++K+Q++FRK K+EM++W+ LQVR +S F+NASSII RL+ +Q+  ++G+L  + GI DA++ +QM  L+    S+K  MEE    V + EK++RD
Subjt:  MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRD

Query:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEEAASLASPLY
        G QL +  S++   +++++R+G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K   P   DL++LQ L+VDQPNI K+E   +   ++
Subjt:  GKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEEAASLASPLY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCCATGGTCAAAAAGTATCAGGAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGATCTTCAAGTTCGTTTGATTTCACAGTTCCAAAATGCTTC
CTCTATCATCGGGAGGCTTGAGTTGCTTCAAGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGAATTGTAGATGCGTTATTGGGGAAGCAGATGGAATCCTTGC
AACTTAGTTTCTCGTCTATTAAAAAAACAATGGAAGAACTTGGGAATGTTGTCCGTTCAATGGAGAAGATTTATCGTGATGGAAAGCAATTAGTCAAAGGTGGTTCCAAT
CAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGCTTGAACGGGTTGATGCTTCTCTGCAACATGCACCGCTCTGAGTACAATCT
TAAAGAATCTATCGTCTCAGCACTTCCAGAACTATTTTGGAAAGCTAGGAATCCTAGAGCGCAAGATCTCAGCTCCTTACAGCAACTCTTGGTTGACCAACCTAACATTC
GGAAAGAGGAAGCTGCCAGTCTTGCTTCTCCGTTATATCTGTCTGTGATGGCCTTTGGCCCTTTACCAGATTTGACGTCTCCTCTCAATTTATACTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSN
QPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEEAASLASPLYLSVMAFGPLPDLTSPLNLY

ClCG02G003390 (gene) of Watermelon (Charleston Gray) v2.5 genome