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ClCG02G003670 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G003670
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionLEA_2 domain-containing protein
Genome locationCG_Chr02:3723172..3723468
RNA-Seq ExpressionClCG02G003670
SyntenyClCG02G003670
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144875.1 uncharacterized protein LOC101215215 [Cucumis sativus]4.4e-4391.84Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
        MEEFYQKRQSSRRV TSVAGHQVPLYGGISAIGNWRDQR DG GVEV LNLTVAVRSRAYILG+LVKSTFHTTITCPITLST KLGKSHSFNN+C YN
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

XP_008447896.1 PREDICTED: uncharacterized protein LOC103490245 [Cucumis melo]1.8e-4493.88Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
        MEEFYQKRQSSRR+ TSVAGHQVPLYGGISAIGNWRDQR DGVGVEV LNLTVAVRSRAYILG+LVKSTFHTTITCPITLSTKKLGKSHSFNN+CTYN
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

XP_022952376.1 uncharacterized protein LOC111455080 [Cucurbita moschata]4.9e-4287.76Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
        M+EFYQ+RQSSRR+TTSVAGHQVPLYGGI+AIGNWRDQ+ DGVGVEVPLNLT+AVRSRAYILG+LVKSTFHTTITC +TLST KLGK HSFNNSCTYN
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

XP_022969162.1 uncharacterized protein LOC111468240 [Cucurbita maxima]6.4e-4287.76Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
        M+EFYQKRQSSRR+TTSVAGHQVPLYGGI+ IGNWRDQ+ DGVGVE+PLNLT+AVRSRAYILGKLVKSTFHTTITC +TLST KLGK HSFNNSCTYN
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

XP_038888376.1 uncharacterized protein LOC120078225 [Benincasa hispida]1.2e-4393.75Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCT
        MEEFYQKRQSSRRV TSVAGHQ+PLYGGISAIGNWRDQR DGVGVE+PLNLTVAVRSRAYILG+LVKSTFHTTITCPITLSTKKLGK HSFNNSCT
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCT

TrEMBL top hitse value%identityAlignment
A0A0A0K4T2 LEA_2 domain-containing protein2.1e-4391.84Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
        MEEFYQKRQSSRRV TSVAGHQVPLYGGISAIGNWRDQR DG GVEV LNLTVAVRSRAYILG+LVKSTFHTTITCPITLST KLGKSHSFNN+C YN
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

A0A1S3BJ42 uncharacterized protein LOC1034902458.7e-4593.88Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
        MEEFYQKRQSSRR+ TSVAGHQVPLYGGISAIGNWRDQR DGVGVEV LNLTVAVRSRAYILG+LVKSTFHTTITCPITLSTKKLGKSHSFNN+CTYN
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

A0A6J1GK23 uncharacterized protein LOC1114550802.4e-4287.76Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
        M+EFYQ+RQSSRR+TTSVAGHQVPLYGGI+AIGNWRDQ+ DGVGVEVPLNLT+AVRSRAYILG+LVKSTFHTTITC +TLST KLGK HSFNNSCTYN
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

A0A6J1HVK7 uncharacterized protein LOC1114682403.1e-4287.76Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
        M+EFYQKRQSSRR+TTSVAGHQVPLYGGI+ IGNWRDQ+ DGVGVE+PLNLT+AVRSRAYILGKLVKSTFHTTITC +TLST KLGK HSFNNSCTYN
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

A0A6J1JK28 uncharacterized protein LOC1114864954.9e-4087.76Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN
        MEEFYQKRQSSR+VTTSV+GHQVPLYGGISAIGNWRDQR D  GVEV LNLTVAVRSRAYILG+LVKSTFHT ITCP+TLS KKLGKSHSFN +CTYN
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G45688.1 unknown protein8.9e-1034.51Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAI-------GNWRDQRHDGVGV----------EVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTK
        +++FYQ R+S R V   V G ++PLYG  S +          + ++  G  V           VP+ L+  VRSRAY+LGKLV+  F+  I C I    K
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAI-------GNWRDQRHDGVGV----------EVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTK

Query:  KLGKSHSFNNSCT
         L K      +CT
Subjt:  KLGKSHSFNNSCT

AT2G41990.1 CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864)5.1e-1343.16Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSC
        M +F   R     V T V GHQ+PLYGG+S   +          + +PLNLT+ + S+AYILG+LV S F+T I C  TL    L KS S   SC
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSC

AT3G24600.1 Late embryogenesis abundant protein, group 23.5e-0632.26Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNN
        ++ +YQ R+S       + G +VPLYG    +        D  G +VP+ L   +RSR  +LGKLVKS     ++C   +S+ K  K   F +
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNN

AT4G35170.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family1.4e-1848.96Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCT
        M EF Q+R+S R + T V G Q+PLYGG+ A+     QR +   V +PLNLT  +R+RAY+LG+LVK+TFH+ I C IT    KLGK+   + SC+
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCT

AT5G42860.1 unknown protein9.5e-1238.39Show/hide
Query:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISA---------IGNWRDQRHDGVGVE-------VPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKK
        +++FYQ R+S R V  +V G ++PLYG  S          I   + ++   V VE       VP+ L   VRSRAY+LGKLV+  F+  I C I    KK
Subjt:  MEEFYQKRQSSRRVTTSVAGHQVPLYGGISA---------IGNWRDQRHDGVGVE-------VPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKK

Query:  LGKSHSFNNSCT
        L K     N+CT
Subjt:  LGKSHSFNNSCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGTTCTACCAAAAACGACAAAGCTCTCGGAGGGTGACGACATCGGTGGCAGGGCACCAGGTCCCGCTCTACGGCGGGATCTCGGCAATAGGAAATTGGCGGGA
CCAACGGCACGATGGGGTCGGGGTCGAGGTACCGCTAAACCTTACAGTGGCTGTGAGGTCCAGAGCTTACATTCTAGGGAAGCTGGTGAAGTCTACATTTCATACAACTA
TTACATGTCCTATCACTCTTAGCACCAAGAAGCTTGGAAAATCTCACTCTTTCAACAATTCTTGCACTTACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGTTCTACCAAAAACGACAAAGCTCTCGGAGGGTGACGACATCGGTGGCAGGGCACCAGGTCCCGCTCTACGGCGGGATCTCGGCAATAGGAAATTGGCGGGA
CCAACGGCACGATGGGGTCGGGGTCGAGGTACCGCTAAACCTTACAGTGGCTGTGAGGTCCAGAGCTTACATTCTAGGGAAGCTGGTGAAGTCTACATTTCATACAACTA
TTACATGTCCTATCACTCTTAGCACCAAGAAGCTTGGAAAATCTCACTCTTTCAACAATTCTTGCACTTACAATTGA
Protein sequenceShow/hide protein sequence
MEEFYQKRQSSRRVTTSVAGHQVPLYGGISAIGNWRDQRHDGVGVEVPLNLTVAVRSRAYILGKLVKSTFHTTITCPITLSTKKLGKSHSFNNSCTYN