; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G004310 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G004310
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransmembrane protein
Genome locationCG_Chr02:4388648..4390097
RNA-Seq ExpressionClCG02G004310
SyntenyClCG02G004310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049726.1 hypothetical protein E6C27_scaffold76G00740 [Cucumis melo var. makuwa]1.1e-5594.07Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
        SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLI+LVR LSS+DPSFFSSSPWDRRRRTHH+PAEG+SPWGVAA IV
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV

Query:  LLLVLVQFQSSFRESWSI
        LLLVL+QFQSSFRESWSI
Subjt:  LLLVLVQFQSSFRESWSI

KAG6588994.1 hypothetical protein SDJN03_17559, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5393.22Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
        SILDSLSLNP PYPVLLLLAVV IFLGASWWLSYESAVEAAED INWILFATPVLLI+L R+LSSVDPS+FSSSPWDRRRRTH LPAEGSSPWGVAALIV
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV

Query:  LLLVLVQFQSSFRESWSI
        LLLVLVQFQSSFRESWSI
Subjt:  LLLVLVQFQSSFRESWSI

KGN43227.1 hypothetical protein Csa_020160 [Cucumis sativus]5.5e-5592.37Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
        SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLI+LVR LSS+DP+FFSSSPWDRRRRTHH+PAEG+SPWGVAA I+
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV

Query:  LLLVLVQFQSSFRESWSI
        LLLVL+QFQSSFRESWSI
Subjt:  LLLVLVQFQSSFRESWSI

XP_022989070.1 uncharacterized protein LOC111486253 [Cucurbita maxima]2.1e-5494.92Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
        SILDSLSLNP PYPVLLLLAVV IFLGASWWLSYESAVEAAED INWILFATPVLLI+L R LSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV

Query:  LLLVLVQFQSSFRESWSI
        LLLVLVQFQSSFRESWSI
Subjt:  LLLVLVQFQSSFRESWSI

XP_038888316.1 uncharacterized protein LOC120078163 [Benincasa hispida]5.9e-5798.31Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
        SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAED INWILFATPVLLIVLVR+LSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV

Query:  LLLVLVQFQSSFRESWSI
        LLLVLVQFQSSFRESWSI
Subjt:  LLLVLVQFQSSFRESWSI

TrEMBL top hitse value%identityAlignment
A0A0A0K4L6 Uncharacterized protein2.7e-5592.37Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
        SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLI+LVR LSS+DP+FFSSSPWDRRRRTHH+PAEG+SPWGVAA I+
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV

Query:  LLLVLVQFQSSFRESWSI
        LLLVL+QFQSSFRESWSI
Subjt:  LLLVLVQFQSSFRESWSI

A0A5A7U6E4 Uncharacterized protein5.4e-5694.07Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
        SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLI+LVR LSS+DPSFFSSSPWDRRRRTHH+PAEG+SPWGVAA IV
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV

Query:  LLLVLVQFQSSFRESWSI
        LLLVL+QFQSSFRESWSI
Subjt:  LLLVLVQFQSSFRESWSI

A0A5N5I8U5 Uncharacterized protein5.4e-4067.48Show/hide
Query:  MSHYRRTTTDSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSF-FSSSPWDRRRRTHHLPAEG
        M++YRR+ T S L+  SL+P PYPVLL+LAV+SIFLG SW+ SYESAVE AE   NW+L  TP+ LI++V+ LSS+DP + FS SPWDRRRRTHH+P+EG
Subjt:  MSHYRRTTTDSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSF-FSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSF
        SSPWGVAA I+LLLVL+Q+QSSF
Subjt:  SSPWGVAALIVLLLVLVQFQSSF

A0A6J1C2N0 uncharacterized protein LOC1110078951.5e-5085.25Show/hide
Query:  MSHYRRTTTDSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGS
        MS YRR+T DSILDSLSLNP PYPVLLLL VV +FLGASWW SYESAVEAAE+ INW+LFATPVLLIVLVR LSSVDPSFF+SSPW+RRR TH LP EGS
Subjt:  MSHYRRTTTDSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGS

Query:  SPWGVAALIVLLLVLVQFQSSF
        SPWGVAALIVLLLVLVQFQS+F
Subjt:  SPWGVAALIVLLLVLVQFQSSF

A0A6J1JLC4 uncharacterized protein LOC1114862531.0e-5494.92Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
        SILDSLSLNP PYPVLLLLAVV IFLGASWWLSYESAVEAAED INWILFATPVLLI+L R LSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV

Query:  LLLVLVQFQSSFRESWSI
        LLLVLVQFQSSFRESWSI
Subjt:  LLLVLVQFQSSFRESWSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein1.2e-2858.73Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDP-----SFFSSSPWDRRRRTHHLPAE----GSS
        SILDS SL+P PYPVLL+LAV S+FL +SW+ S E A E+AE+ IN+ L   P+ LIVLVR LSS++        FSSS    RR T+  P      GSS
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDP-----SFFSSSPWDRRRRTHHLPAE----GSS

Query:  PWGVAALIVLLLVLVQFQSSFRESWS
        PWGVAALIVLLLVL+Q+QSSF E WS
Subjt:  PWGVAALIVLLLVLVQFQSSFRESWS

AT2G31940.1 unknown protein9.9e-1029.91Show/hide
Query:  PPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ
        P P  + + + ++ +F+  SW+ SYE  +E         L A+P+LL++ V  LS         +          L   G +PWGVA ++V L  +V +Q
Subjt:  PPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ

Query:  SSFRESW
        S F+E W
Subjt:  SSFRESW

AT5G19875.1 unknown protein3.5e-1541.88Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIF-LGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALI
        S LD LSL   P P L  L +V  F L  +W+L++ES +E   DH+  +   TP+ L++LV   S    SF+   PW  +   H     GSSPWGVAA++
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIF-LGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALI

Query:  VLLLVLVQFQSSFRESW
        VL+L +V +QS F+E W
Subjt:  VLLLVLVQFQSSFRESW

AT5G42146.1 unknown protein3.1e-1135.45Show/hide
Query:  LSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVL
        L+ + PP  +L LLA++S+ L  S +  Y+  VE    ++   +   P+L + ++  LS V    F SS   R  +   L  EG+ PWGV  +++LLL+L
Subjt:  LSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVL

Query:  VQFQSSFHSI
        V  QS FHS+
Subjt:  VQFQSSFHSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCATTACAGAAGAACCACCACAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCCGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCTCGG
CGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTTGAGGCTGCCGAGGATCACATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGACTCCTCT
CCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCATCTCCCGGCCGAAGGAAGCTCGCCGTGGGGCGTGGCTGCGTTGATCGTG
CTCTTGCTCGTTCTTGTGCAGTTCCAGTCCTCGTTCCATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCCGTCCTCCTCCTCCTCGCCGTCGTCTCCAT
CTTCCTCGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTTGAGGCTGCCGAGGATCACATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCC
GACTCCTCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCATCTCCCGGCCGAAGGAAGCTCGCCGTGGGGCGTGGCTGCG
TTGATCGTGCTCTTGCTCGTTCTTGTGCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCATTACAGAAGAACCACCACAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCCGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCTCGG
CGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTTGAGGCTGCCGAGGATCACATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGACTCCTCT
CCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCATCTCCCGGCCGAAGGAAGCTCGCCGTGGGGCGTGGCTGCGTTGATCGTG
CTCTTGCTCGTTCTTGTGCAGTTCCAGTCCTCGTTCCATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCCGTCCTCCTCCTCCTCGCCGTCGTCTCCAT
CTTCCTCGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTTGAGGCTGCCGAGGATCACATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCC
GACTCCTCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCATCTCCCGGCCGAAGGAAGCTCGCCGTGGGGCGTGGCTGCG
TTGATCGTGCTCTTGCTCGTTCTTGTGCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA
Protein sequenceShow/hide protein sequence
MSHYRRTTTDSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIV
LLLVLVQFQSSFHSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWILFATPVLLIVLVRLLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAA
LIVLLLVLVQFQSSFRESWSI