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ClCG02G004560 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G004560
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description30S ribosomal protein S31, mitochondrial
Genome locationCG_Chr02:4732504..4732770
RNA-Seq ExpressionClCG02G004560
SyntenyClCG02G004560
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448047.1 PREDICTED: 30S ribosomal protein S31, mitochondrial [Cucumis melo]1.9e-3793.18Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAMAQWCGAVARGV+AAERRSPSLTSSM VEGLVPILCGRGDKKTK+GKRFKGSYGNARPKKEKKI+RIKDKIEVP ST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

XP_011658557.1 30S ribosomal protein S31, mitochondrial [Cucumis sativus]3.2e-3794.32Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAMAQW GAVARGVMAAERRSPSLTSSM VEGLVPILCGRGDK+TK+GKRFKGSYGNARPKKEKKIQRIKDKIEVPSST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

XP_022933003.1 30S ribosomal protein S31, mitochondrial [Cucurbita moschata]1.1e-3795.45Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAM QWCGAVARGVMAAERRSPSLTSSM VEGLVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

XP_022952601.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita moschata]1.0e-3593.02Show/hide
Query:  MAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAQWCGA+A+ VMAAERRSPSLTSSM VEGLVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSST WPLPFKLI
Subjt:  MAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

XP_038888313.1 30S ribosomal protein S31, mitochondrial [Benincasa hispida]7.2e-3794.32Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAMAQ CGA+ARGVMAAERRSPSLTSSM  EGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

TrEMBL top hitse value%identityAlignment
A0A0A0K141 30S ribosomal protein S31, mitochondrial1.6e-3794.32Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAMAQW GAVARGVMAAERRSPSLTSSM VEGLVPILCGRGDK+TK+GKRFKGSYGNARPKKEKKIQRIKDKIEVPSST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

A0A1S3BI88 30S ribosomal protein S31, mitochondrial9.2e-3893.18Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAMAQWCGAVARGV+AAERRSPSLTSSM VEGLVPILCGRGDKKTK+GKRFKGSYGNARPKKEKKI+RIKDKIEVP ST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

A0A5A7SX60 30S ribosomal protein S319.2e-3893.18Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAMAQWCGAVARGV+AAERRSPSLTSSM VEGLVPILCGRGDKKTK+GKRFKGSYGNARPKKEKKI+RIKDKIEVP ST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

A0A6J1F3E9 30S ribosomal protein S31, mitochondrial5.4e-3895.45Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAM QWCGAVARGVMAAERRSPSLTSSM VEGLVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

A0A6J1GKP4 30S ribosomal protein S31, mitochondrial-like5.1e-3693.02Show/hide
Query:  MAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MAQWCGA+A+ VMAAERRSPSLTSSM VEGLVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSST WPLPFKLI
Subjt:  MAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic6.4e-0453.66Show/hide
Query:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVP
        + CGRGD+KT KGKRF  S+GNARP+ + K  R  +++ VP
Subjt:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVP

P47909 30S ribosomal protein S31, mitochondrial8.3e-2083.02Show/hide
Query:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        + CGRGDKKTK+GKRFKGSYGNARPK+EKKI+RIKD++EVP ST WPLPFKLI
Subjt:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

P47910 30S ribosomal protein S31, chloroplastic8.9e-0650Show/hide
Query:  GVMAAERRSPSLTSSMVVEGLVPIL-CGRGDKKTKKGKRFKGSYGNARPKKEKK
        GV  +   + SL+SS+     +P++ CGRGD+KT KGKRF  S+GNARPK + K
Subjt:  GVMAAERRSPSLTSSMVVEGLVPIL-CGRGDKKTKKGKRFKGSYGNARPKKEKK

Q9SJU8 30S ribosomal protein S31, mitochondrial7.3e-2459.18Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPI----------LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MA  QWCGA+ R +M  +R S +L  S     L P           LCGRGDKKTKKGKRFKGSYGN+R KK+K I+RIKDK+E+P ST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPI----------LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

Arabidopsis top hitse value%identityAlignment
AT2G21290.1 unknown protein5.2e-2559.18Show/hide
Query:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPI----------LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI
        MA  QWCGA+ R +M  +R S +L  S     L P           LCGRGDKKTKKGKRFKGSYGN+R KK+K I+RIKDK+E+P ST WPLPFKLI
Subjt:  MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPI----------LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI

AT2G38140.1 plastid-specific ribosomal protein 44.6e-0553.66Show/hide
Query:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVP
        + CGRGD+KT KGKRF  S+GNARP+ + K  R  +++ VP
Subjt:  ILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGCGCAGTGGTGCGGCGCTGTGGCTAGGGGAGTGATGGCGGCGGAGCGACGGTCTCCTTCTCTAACGTCGTCAATGGTGGTCGAAGGACTGGTGCCAATCCT
TTGTGGACGAGGTGACAAGAAGACGAAGAAAGGGAAAAGATTCAAAGGCTCGTACGGAAACGCCAGGCCGAAGAAGGAGAAGAAGATACAGCGAATCAAGGATAAAATTG
AGGTTCCTAGTTCCACTCGTTGGCCTCTTCCTTTCAAGCTTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGGCGCAGTGGTGCGGCGCTGTGGCTAGGGGAGTGATGGCGGCGGAGCGACGGTCTCCTTCTCTAACGTCGTCAATGGTGGTCGAAGGACTGGTGCCAATCCT
TTGTGGACGAGGTGACAAGAAGACGAAGAAAGGGAAAAGATTCAAAGGCTCGTACGGAAACGCCAGGCCGAAGAAGGAGAAGAAGATACAGCGAATCAAGGATAAAATTG
AGGTTCCTAGTTCCACTCGTTGGCCTCTTCCTTTCAAGCTTATCTGA
Protein sequenceShow/hide protein sequence
MAMAQWCGAVARGVMAAERRSPSLTSSMVVEGLVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTRWPLPFKLI