; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G005970 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G005970
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationCG_Chr02:6607168..6614995
RNA-Seq ExpressionClCG02G005970
SyntenyClCG02G005970
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031301.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa]3.8e-9677.73Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ
        CC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS    N Q
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ

XP_004136978.1 cold-regulated protein 27 isoform X1 [Cucumis sativus]6.8e-9375.81Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR   ALS K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPI P+I+SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CS RR IR  TNSC SAR+SQ   P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV
        CC +S TIITEVSDQNFVD+ PGELS  MPIAKRL+KASSD S + QV
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV

XP_008454952.1 PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]1.0e-9677.82Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV
        CC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS    N QV
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV

XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]3.8e-8871.08Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST
        M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST

Query:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP
        KQK+RRKPIMPNI+SSE M+LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CS R  IRN TNS  SARSSQQIP
Subjt:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP

Query:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV
        PCC DS+TI+TEVSDQNFVD  PGELS   PI KRL+KASSDSSGN++V
Subjt:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV

XP_038887003.1 cold-regulated protein 27 isoform X1 [Benincasa hispida]2.3e-10983.74Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQK
        M  SHT SSISPPPL DRRQSLMPPSA+DSTR  SQS SSSIT+DGSN F + +HSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRR ALS +QK
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQK

Query:  IRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCC
        +  KP MPNI+SSELMILQDASWQKANIGRNDP LD TADSPAILEDLWINRFPSAGKQCT E PD+LEECG+CS RR +RNT+NSCGSARSSQQIPPCC
Subjt:  IRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCC

Query:  HDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV
         DSN IITEVSDQNFVDD P ELSG +PIAKRL+K SSDSSGNDQV
Subjt:  HDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z2 Uncharacterized protein3.3e-9375.81Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR   ALS K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPI P+I+SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CS RR IR  TNSC SAR+SQ   P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV
        CC +S TIITEVSDQNFVD+ PGELS  MPIAKRL+KASSD S + QV
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV

A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X14.9e-9777.82Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV
        CC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS    N QV
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV

A0A5D3C4A3 Cold regulated protein 27, putative isoform 21.9e-9677.73Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ
        CC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS    N Q
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X21.9e-8871.08Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST
        M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST

Query:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP
        KQK+RRKPIMPNI+SSE M+LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CS R  IRN TNS  SARSSQQIP
Subjt:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP

Query:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV
        PCC DS+TI+TEVSDQNFVD  PGELS   PI KRL+KASSDSSGN++V
Subjt:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X11.9e-8871.08Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST
        M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST

Query:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP
        KQK+RRKPIMPNI+SSE M+LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CS R  IRN TNS  SARSSQQIP
Subjt:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP

Query:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV
        PCC DS+TI+TEVSDQNFVD  PGELS   PI KRL+KASSDSSGN++V
Subjt:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 272.8e-0929.31Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD

Query:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF
          WQK N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+     D + I     EVSDQNF
Subjt:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF

Query:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV
        V++    + G    +K+++    S+SS  DQV
Subjt:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV

Q8L983 Cold-regulated protein 281.5e-0529.36Show/hide
Query:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM
        S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ L+           R RD  S   K          ++ +  
Subjt:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM

Query:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ
        +LQ+  WQK N G+                           KQ  LET           HR  +RN    +N   +  ++ Q    CHD  T  +E S Q
Subjt:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ

Query:  NFVDDCPGELSGAMPIAKRLRKASSDSSG--NDQV
        NF ++   E  G +   KR R+A++D S    DQV
Subjt:  NFVDDCPGELSGAMPIAKRLRKASSDSSG--NDQV

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)1.0e-0629.36Show/hide
Query:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM
        S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ L+           R RD  S   K          ++ +  
Subjt:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM

Query:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ
        +LQ+  WQK N G+                           KQ  LET           HR  +RN    +N   +  ++ Q    CHD  T  +E S Q
Subjt:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ

Query:  NFVDDCPGELSGAMPIAKRLRKASSDSSG--NDQV
        NF ++   E  G +   KR R+A++D S    DQV
Subjt:  NFVDDCPGELSGAMPIAKRLRKASSDSSG--NDQV

AT4G33980.2 FUNCTIONS IN: molecular_function unknown1.0e-0629.36Show/hide
Query:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM
        S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ L+           R RD  S   K          ++ +  
Subjt:  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM

Query:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ
        +LQ+  WQK N G+                           KQ  LET           HR  +RN    +N   +  ++ Q    CHD  T  +E S Q
Subjt:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ

Query:  NFVDDCPGELSGAMPIAKRLRKASSDSSG--NDQV
        NF ++   E  G +   KR R+A++D S    DQV
Subjt:  NFVDDCPGELSGAMPIAKRLRKASSDSSG--NDQV

AT5G42900.1 cold regulated gene 272.0e-1029.31Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD

Query:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF
          WQK N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+     D + I     EVSDQNF
Subjt:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF

Query:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV
        V++    + G    +K+++    S+SS  DQV
Subjt:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV

AT5G42900.2 cold regulated gene 272.0e-1029.31Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD

Query:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF
          WQK N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+     D + I     EVSDQNF
Subjt:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF

Query:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV
        V++    + G    +K+++    S+SS  DQV
Subjt:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV

AT5G42900.3 cold regulated gene 276.9e-1129.44Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD

Query:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCC--HDSNTIITEVSDQNFV
          WQK N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+      HD  ++  EVSDQNFV
Subjt:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCC--HDSNTIITEVSDQNFV

Query:  DDCPGELSGAMPIAKRLRKA-SSDSSGNDQV
        ++    + G    +K+++    S+SS  DQV
Subjt:  DDCPGELSGAMPIAKRLRKA-SSDSSGNDQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTAGCGCCCATGTGGAGCCTTTTTATTTGGGTTTCGCCCCCAAAAAGAACACACCACCATTCACCTCTTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCC
CCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTCCAGTTCCATTTCCTCCTCCTATTTTTGGTTCTTTCGATCGATTTCCCCTTGTTTTTCATCCCTCCGTAATGG
CTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGAC
TCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATTCTCTGCAACTCGATGCGGAGCAAACACATTGGACAGATGAGAAACACAGATTATATCT
TGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAAACAGAAAATTCGTCGGAAGCCAATCATGCCTAATATAACTT
CTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATTACACTGCTGATTCTCCTGCTATTTTAGAGGATCTA
TGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAATTGTAGTCATAGGAGACGCATAAGAAACACAACGAA
CTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATTCTAATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGG
AGTTGTCTGGTGCCATGCCTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAATGACCAGGTATGA
mRNA sequenceShow/hide mRNA sequence
CGTAGCGCCCATGTGGAGCCTTTTTATTTGGGTTTCGCCCCCAAAAAGAACACACCACCATTCACCTCTTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCC
CCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTCCAGTTCCATTTCCTCCTCCTATTTTTGGTTCTTTCGATCGATTTCCCCTTGTTTTTCATCCCTCCGTAATGG
CTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGAC
TCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATTCTCTGCAACTCGATGCGGAGCAAACACATTGGACAGATGAGAAACACAGATTATATCT
TGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAAACAGAAAATTCGTCGGAAGCCAATCATGCCTAATATAACTT
CTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATTACACTGCTGATTCTCCTGCTATTTTAGAGGATCTA
TGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAATTGTAGTCATAGGAGACGCATAAGAAACACAACGAA
CTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATTCTAATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGG
AGTTGTCTGGTGCCATGCCTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAATGACCAGGTATGA
Protein sequenceShow/hide protein sequence
RSAHVEPFYLGFAPKKNTPPFTSSLSLPLHFSTSLNPQRVSDLNFLPPFPVPFPPPIFGSFDRFPLVFHPSVMADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSD
SSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDL
WINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV