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ClCG02G006040 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G006040
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPlant transposase
Genome locationCG_Chr02:6685699..6689394
RNA-Seq ExpressionClCG02G006040
SyntenyClCG02G006040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032201.1 Plant transposase [Cucumis melo var. makuwa]1.5e-1771.23Show/hide
Query:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        ++ S SI++D ISRVLG D  ++RGLGFGVT SK+STS QKDKTI SL+ KC+NLTSDVD+LK+VVASLLKDK
Subjt:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

KAA0042856.1 Plant transposase [Cucumis melo var. makuwa]1.1e-1774.29Show/hide
Query:  SGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        S SI++D ISRVLG D  ++RGLGFGVT SK+STS QKDKTI SL+ KC+NLTSDVD+LK+VVASLLKDK
Subjt:  SGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

KAA0057491.1 Plant transposase [Cucumis melo var. makuwa]4.3e-1769.86Show/hide
Query:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        ++ S SI++D ISRVLG D  ++RGLGFGVT SK+STS QKDKTI SL+ KC+NLTSDVD+LK+VVAS LKDK
Subjt:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

TYK28558.1 Plant transposase [Cucumis melo var. makuwa]3.9e-1871.23Show/hide
Query:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        ++ S SI++D ISRVLG D G++RGLGFGVT SK+STS  KDKTI SL+ KC+NLTSDVD+LK+VVASLLKDK
Subjt:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

XP_038900033.1 uncharacterized protein LOC120087197 [Benincasa hispida]1.3e-1870.83Show/hide
Query:  SHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        S S SI++D ISRV G +H H+RGLGFGVT SKLSTSTQKD+TIASL+ KCNNLT+DVD+LK ++ASL++DK
Subjt:  SHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

TrEMBL top hitse value%identityAlignment
A0A5A7SRN7 Plant transposase7.2e-1871.23Show/hide
Query:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        ++ S SI++D ISRVLG D  ++RGLGFGVT SK+STS QKDKTI SL+ KC+NLTSDVD+LK+VVASLLKDK
Subjt:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

A0A5A7TLJ2 Plant transposase5.5e-1874.29Show/hide
Query:  SGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        S SI++D ISRVLG D  ++RGLGFGVT SK+STS QKDKTI SL+ KC+NLTSDVD+LK+VVASLLKDK
Subjt:  SGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

A0A5A7UH01 Transposase6.1e-1768.49Show/hide
Query:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        ++ S SI++D ISRVLG D G+++GLGF VT SK+STS Q DKTI SL++KC+NLTSDVD+LK+VVASLLKDK
Subjt:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

A0A5A7UVF2 Plant transposase2.1e-1769.86Show/hide
Query:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        ++ S SI++D ISRVLG D  ++RGLGFGVT SK+STS QKDKTI SL+ KC+NLTSDVD+LK+VVAS LKDK
Subjt:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

A0A5D3DYN2 Plant transposase1.9e-1871.23Show/hide
Query:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK
        ++ S SI++D ISRVLG D G++RGLGFGVT SK+STS  KDKTI SL+ KC+NLTSDVD+LK+VVASLLKDK
Subjt:  MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCATTCGGGTAGTATAGTTGAAGATACAATTAGTAGAGTTTTGGGTTTCGACCATGGCCACATACGAGGATTAGGATTTGGGGTGACTAAATCGAAGTTGTCTAC
ATCAACTCAAAAAGATAAAACTATTGCATCTCTTAAAAGCAAATGCAACAACCTAACGTCAGATGTAGATGATCTGAAAAATGTGGTAGCTTCCTTATTAAAGGACAAGA
TTGAAGCTTTAAATATCTCAAGACTGAAACTCACAAGCTCACAAGCTCTGAAGATTGAAGCCCCAAATTCTAGAGACTTGAAAATCAAAGTCTTTGAAGTTGAAGTCTCA
AAGAAGATTTGGAATACTCAAGAGGGGGACATGAATGAACCAAGATCATATCCGAATGAGAGGGATCCTGAAGATATGAAAAAGCAATTTAAGACAAGCAAGGATGATGT
CACTACGTCGCAGGGGAATGTCAAAGCCATCAGTTGCCTAATCTGGATTCTGAATCCTAATCCTGGGGCGTTACAAAAATTATGCAATATAAAATGGGTTTGCGTAATTG
CGCTTGCACGAAAAGGAAATAAATTTTTAATACCTATCCCTGCTTTTTCGATTGATTCCAATCTATTCTCCGACGAGTGCACATCTGAGTTTGGGTGTTGTGTGAACCTT
GAGGAGCAACCGGCTTCTTGCATATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCATTCGGGTAGTATAGTTGAAGATACAATTAGTAGAGTTTTGGGTTTCGACCATGGCCACATACGAGGATTAGGATTTGGGGTGACTAAATCGAAGTTGTCTAC
ATCAACTCAAAAAGATAAAACTATTGCATCTCTTAAAAGCAAATGCAACAACCTAACGTCAGATGTAGATGATCTGAAAAATGTGGTAGCTTCCTTATTAAAGGACAAGA
TTGAAGCTTTAAATATCTCAAGACTGAAACTCACAAGCTCACAAGCTCTGAAGATTGAAGCCCCAAATTCTAGAGACTTGAAAATCAAAGTCTTTGAAGTTGAAGTCTCA
AAGAAGATTTGGAATACTCAAGAGGGGGACATGAATGAACCAAGATCATATCCGAATGAGAGGGATCCTGAAGATATGAAAAAGCAATTTAAGACAAGCAAGGATGATGT
CACTACGTCGCAGGGGAATGTCAAAGCCATCAGTTGCCTAATCTGGATTCTGAATCCTAATCCTGGGGCGTTACAAAAATTATGCAATATAAAATGGGTTTGCGTAATTG
CGCTTGCACGAAAAGGAAATAAATTTTTAATACCTATCCCTGCTTTTTCGATTGATTCCAATCTATTCTCCGACGAGTGCACATCTGAGTTTGGGTGTTGTGTGAACCTT
GAGGAGCAACCGGCTTCTTGCATATAG
Protein sequenceShow/hide protein sequence
MSHSGSIVEDTISRVLGFDHGHIRGLGFGVTKSKLSTSTQKDKTIASLKSKCNNLTSDVDDLKNVVASLLKDKIEALNISRLKLTSSQALKIEAPNSRDLKIKVFEVEVS
KKIWNTQEGDMNEPRSYPNERDPEDMKKQFKTSKDDVTTSQGNVKAISCLIWILNPNPGALQKLCNIKWVCVIALARKGNKFLIPIPAFSIDSNLFSDECTSEFGCCVNL
EEQPASCI