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ClCG02G006600 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G006600
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionclassical arabinogalactan protein 9
Genome locationCG_Chr02:7610061..7613528
RNA-Seq ExpressionClCG02G006600
SyntenyClCG02G006600
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR044981 - Lysine-rich arabinogalactan protein AGP9/17/18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571935.1 hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sororia]4.1e-4256.31Show/hide
Query:  MDRQALLCFTFISIAFAIAGAQSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA
        MD QAL C T ISIAFA+AGAQ P+S PT TPAPPTTTT P  ATPPPVSAPPPA+PPPATPPPA+PPPATPPPA+PPPATPPPA+PPPATPPPA+PPPA
Subjt:  MDRQALLCFTFISIAFAIAGAQSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA

Query:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA
        TPPPA+PPPATPPPA+PPPATPPPATPPPATPPPA                                                                 
Subjt:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA

Query:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSIL
                                   P A+PP A P  AP+     A P  GP+PVSSPP P+ E PGPAGPESPTPSQNDNSGVE  WRKETMVGS+L
Subjt:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSIL

Query:  IGMGYVFMM
        IGMGYV MM
Subjt:  IGMGYVFMM

KAG7011623.1 hypothetical protein SDJN02_26529, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-2874.49Show/hide
Query:  PATPPPATPPPA----TPPPATPPP-ATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP
        P   P   P P+     P  ATPPP + PPPATPPPATPPPA+PPPATPPPA+PPPATPPPA+PPPATPPPA+PPPATPPPA+PPPATPPPA+PPPATPP
Subjt:  PATPPPATPPPA----TPPPATPPP-ATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP

Query:  PATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSILIGMGYVFMM
        PATPPPATPPPA  P A+PP A P  AP+     A P  GP+PVSSPP P+ E PGPAGPESPTPSQNDNSGVE  WRKETMVGS+LIGMGYV MM
Subjt:  PATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSILIGMGYVFMM

XP_008455018.1 PREDICTED: classical arabinogalactan protein 9 [Cucumis melo]1.2e-3051.44Show/hide
Query:  MMDRQA-LLCFTFISIAFAIAGAQSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP
        MMD +A LLCFTFISIAFAIAGAQSP+S PT TP+PPTT+ PP  +TPPPVS+PPPA                                           
Subjt:  MMDRQA-LLCFTFISIAFAIAGAQSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP

Query:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP
                                                      ATPPPA    ATPPPA+PPPA+PPPA+PPPATPPPA+PPPA+PPPA+PPPA+PP
Subjt:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP

Query:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGP-ESPTPSQNDNSGVENVWRKETMVG
        PA+PPPA+PPPA PPPA  P A+PP A P PA        +AP           GP+PVSSPPAP++EAPGPAGP +SPTPSQNDNSGVE VWRKE+MVG
Subjt:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGP-ESPTPSQNDNSGVENVWRKETMVG

Query:  SILIGMGYVFMML
        SI+IGMGYVF+ML
Subjt:  SILIGMGYVFMML

XP_022952421.1 classical arabinogalactan protein 9-like [Cucurbita moschata]8.8e-2973.96Show/hide
Query:  PPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATP
        PP++PP A   P T     PPPATPPP + PP   PPATPPPA+PPPATPPPA+PPPATPPPA+PPPA+PPPATPPPA+PPPATPPPA+PPPATPPPATP
Subjt:  PPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATP

Query:  PPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSILIGMGYVFMM
        PPATPPPA  P A+PP A P  AP+     A P  GP+PVSSPP P+ E PGPAGPESPTPSQNDNSGVE  WRKETMVGS+LIGMGYV MM
Subjt:  PPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSILIGMGYVFMM

XP_023553858.1 classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]1.1e-3652.43Show/hide
Query:  MDRQALLCFTFISIAFAIAGAQSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA
        MD QAL CFT ISIAFA+AGAQ P+S PT T APPTTTT P  ATPPPVS+PPPA+PPPA+PPPATPPPA+PPPATPPPA+PPPATPPPA+PPPATPPPA
Subjt:  MDRQALLCFTFISIAFAIAGAQSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA

Query:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA
        +PPPATPPPA+PPPATPPPATPPP                                                                            
Subjt:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA

Query:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSIL
                                   P A+PP A P  AP+     A P  GP+PVSSPP P+ E PGPAGPESPTPSQNDNSGVE  WRKETMVGS+L
Subjt:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSIL

Query:  IGMGYVFMM
        IGMGYV MM
Subjt:  IGMGYVFMM

TrEMBL top hitse value%identityAlignment
A0A1S3BZW9 classical arabinogalactan protein 95.9e-3151.44Show/hide
Query:  MMDRQA-LLCFTFISIAFAIAGAQSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP
        MMD +A LLCFTFISIAFAIAGAQSP+S PT TP+PPTT+ PP  +TPPPVS+PPPA                                           
Subjt:  MMDRQA-LLCFTFISIAFAIAGAQSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP

Query:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP
                                                      ATPPPA    ATPPPA+PPPA+PPPA+PPPATPPPA+PPPA+PPPA+PPPA+PP
Subjt:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP

Query:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGP-ESPTPSQNDNSGVENVWRKETMVG
        PA+PPPA+PPPA PPPA  P A+PP A P PA        +AP           GP+PVSSPPAP++EAPGPAGP +SPTPSQNDNSGVE VWRKE+MVG
Subjt:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGP-ESPTPSQNDNSGVENVWRKETMVG

Query:  SILIGMGYVFMML
        SI+IGMGYVF+ML
Subjt:  SILIGMGYVFMML

A0A2H5U4I5 Putative npip-like protein2.8e-1259.55Show/hide
Query:  QSPASSPTYT-PAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA
        Q+  S PT T P PP  T PPS   PPP   PPP+ PPP TPPP+ PPP TPPP+ PPP TPPP  PPP TPPP TPPP TPPP TPPP TPPP TPPP 
Subjt:  QSPASSPTYT-PAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA

Query:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA
        TPPP  PPP TPPP+ PPP TPPP+ PPP TPPP  PPP TPPP  PPP TPPP TPPP TPPP TPPP TPPP  PPP TPPP  PPP TPPP   PP 
Subjt:  TPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPA

Query:  TPPPATPPPATP----------PPATPPSAPTTSPPAAVPAQGP-SPVSSPPAPAMEAPGPAGPESP
         P P  PP A P          PP  PP+ P   PP   P + P  P   PP    +AP    P  P
Subjt:  TPPPATPPPATP----------PPATPPSAPTTSPPAAVPAQGP-SPVSSPPAPAMEAPGPAGPESP

A0A6A4YBF5 Uncharacterized protein (Fragment)3.2e-1665.15Show/hide
Query:  QSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPAT
        Q     PT+ P  P   TPP   TPPP   PPP +PPP TPPP TPPP TP P TPPP TPPP TPPPATPPP TPPPATPPP TP PATPPP T PP T
Subjt:  QSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPAT

Query:  PPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPAT
        PPP TPPPATPPPATP P TPPP TP P TPPP T PPATPPP TP P T PP TPPPATPPP TPP ATPPP TP P TPPPA+ PP   PP TPPP T
Subjt:  PPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPAT

Query:  PPPATPPPATPPPATPP---SAPTTSPPAAVPAQGPSPVSSPPA---PAMEAPGPAGPESPTPS
        P PATPP  TP PATPP     P T PPA  P   P P++ P A   P   AP    PES  P+
Subjt:  PPPATPPPATPPPATPP---SAPTTSPPAAVPAQGPSPVSSPPA---PAMEAPGPAGPESPTPS

A0A6J1GK65 classical arabinogalactan protein 9-like4.3e-2973.96Show/hide
Query:  PPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATP
        PP++PP A   P T     PPPATPPP + PP   PPATPPPA+PPPATPPPA+PPPATPPPA+PPPA+PPPATPPPA+PPPATPPPA+PPPATPPPATP
Subjt:  PPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATP

Query:  PPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSILIGMGYVFMM
        PPATPPPA  P A+PP A P  AP+     A P  GP+PVSSPP P+ E PGPAGPESPTPSQNDNSGVE  WRKETMVGS+LIGMGYV MM
Subjt:  PPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSILIGMGYVFMM

Q4A2S9 Putative membrane protein2.1e-1255.08Show/hide
Query:  PASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP
        P S P  +P PP+   PPS   PPP  +PPP SPPP +PPP +PPP +PPP +PPP +PPP +PPP +PPP +PPP +PPP +PPP +PPP +PPP +PP
Subjt:  PASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP

Query:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP
        P +PPP +PPP +PPP +PPP +PPP  PPP+ PPP+ PPP+ PPP+ PPP+ PPP+ PPP+ PPP+ PPP+ PPP+ PPP   PP +PPP +PPP +PP
Subjt:  PATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPP

Query:  PATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPS
        P +PPP +PPP +PP  P + PP + P   P P S PP P    P P  P  P PS
Subjt:  PATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATCGTCAAGCTTTGTTGTGTTTCACTTTCATCTCCATTGCCTTTGCCATCGCCGGAGCTCAGTCTCCCGCCAGTTCTCCCACCTACACCCCTGCTCCT
CCCACCACCACCACCCCCCCTTCTACCGCCACTCCTCCCCCTGTTTCAGCTCCCCCACCGGCATCCCCACCTCCAGCAACTCCTCCTCCGGCAACTCCCCCTCCG
GCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCG
GCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCG
GCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCG
GCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCTCCTCCGGCAACTCCCCCTCCG
GCTACTCCTCCTCCGGCAACTCCCCCTCCGGCCACTCCCCCACCGGCCACTCCTCCACCTGCAACGCCACCACCCGCAACTCCACCGTCTGCACCAACGACATCC
CCACCAGCAGCGGTTCCGGCTCAGGGTCCGTCCCCAGTTTCGAGCCCGCCGGCGCCGGCAATGGAAGCTCCAGGACCTGCTGGCCCTGAATCTCCTACTCCGTCT
CAGAACGACAATAGTGGAGTGGAGAACGTTTGGAGAAAGGAGACCATGGTGGGGAGCATATTGATTGGAATGGGATATGTATTTATGATGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGATCGTCAAGCTTTGTTGTGTTTCACTTTCATCTCCATTGCCTTTGCCATCGCCGGAGCTCAGTCTCCCGCCAGTTCTCCCACCTACACCCCTGCTCCT
CCCACCACCACCACCCCCCCTTCTACCGCCACTCCTCCCCCTGTTTCAGCTCCCCCACCGGCATCCCCACCTCCAGCAACTCCTCCTCCGGCAACTCCCCCTCCG
GCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCG
GCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCG
GCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCG
GCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCCCCTCCGGCTACTCCTCCTCCGGCAACTCCCCCTCCG
GCTACTCCTCCTCCGGCAACTCCCCCTCCGGCCACTCCCCCACCGGCCACTCCTCCACCTGCAACGCCACCACCCGCAACTCCACCGTCTGCACCAACGACATCC
CCACCAGCAGCGGTTCCGGCTCAGGGTCCGTCCCCAGTTTCGAGCCCGCCGGCGCCGGCAATGGAAGCTCCAGGACCTGCTGGCCCTGAATCTCCTACTCCGTCT
CAGAACGACAATAGTGGAGTGGAGAACGTTTGGAGAAAGGAGACCATGGTGGGGAGCATATTGATTGGAATGGGATATGTATTTATGATGCTTTAGGAAGAAGAA
AGGGGTTGGACATAGTTGATATTATAATGTAATGGGTCATTTCTTCCTTCTGCAGTGCCCCCCTCTTTTTTGCTGTCTATGTGTTGCCTTTTCCATTATTCTTCA
TATTGGTTGCTCTATATTTTAGTTCATTTCGATTATTATTAGCCCATGTCTTGTTTGGGACTCTTGATTTATTATTATTAGCCTTTTGGGCTCTCTTTATATATA
GATATATATGATTACCCATTTGCTTGGGATTCTTTTGAGGTAAACAGCTTTTGTATCAACCCTATTTAGAGGGACTTGTTTTATGTTTTTAGTTTCATTATTATT
GC
Protein sequenceShow/hide protein sequence
MMDRQALLCFTFISIAFAIAGAQSPASSPTYTPAPPTTTTPPSTATPPPVSAPPPASPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPP
ATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPPATPPP
ATPPPATPPPATPPPATPPPATPPPATPPSAPTTSPPAAVPAQGPSPVSSPPAPAMEAPGPAGPESPTPSQNDNSGVENVWRKETMVGSILIGMGYVFMML