; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G006640 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G006640
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPUM-HD domain-containing protein
Genome locationCG_Chr02:7652648..7659523
RNA-Seq ExpressionClCG02G006640
SyntenyClCG02G006640
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR003121 - SWIB/MDM2 domain
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR019835 - SWIB domain
IPR033133 - Pumilio homology domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]1.6e-9571.14Show/hide
Query:  RHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISP
        RHR+VV LIS L+YPCQQW I L M PHVLTLAKDF  GH+V++SCF N  P  NELI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISP
Subjt:  RHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISP

Query:  LIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSV
        LIQDV +LS HPYGNYVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE N  ++L+QICTNQYGN+VVQT MS+
Subjt:  LIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSV

Query:  AKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSKLQEF
        AKG+  KLL + IKSHW  LQ H YG+NVI S + R KKK+KL ++
Subjt:  AKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSKLQEF

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]4.2e-6776.69Show/hide
Query:  SLAHARHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLRE
        SL +  +RVVV LIS L+YPCQQW IAL MSPHVLTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLRE
Subjt:  SLAHARHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLRE

Query:  VLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        VLI+PLI+D  +LS HPYGNYVIQ+MIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  VLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]1.3e-5551.01Show/hide
Query:  HSLAHARHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLR
        HSL     + VVKL+ RL  P  Q   A+ +S H + LAK    GH VL +CF NLS   NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR
Subjt:  HSLAHARHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLR

Query:  EVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVV
         VL++PLIQ+  +LS H Y N+VIQ++I+LD ANIG R+I  L+NKFV L + K GS+VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV 
Subjt:  EVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVV

Query:  QTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKS
        Q A+SVAKGEAY LL R IKS    L+ HPYG++V+ +   R ++ S
Subjt:  QTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKS

XP_023553864.1 uncharacterized protein LOC111811315 [Cucurbita pepo subsp. pepo]2.4e-3886Show/hide
Query:  MTFVSTFISGEPSLLVAKAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        M FVSTF+SGEPSLLVA+A    SSVKHP QLPLPNLRF+RT+TFASASNQ TAS RQPRGIMKPRR+SPEMQALVGAPEISRTQALKVIW HIKEHNLQ
Subjt:  MTFVSTFISGEPSLLVAKAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

XP_038888173.1 uncharacterized protein LOC120078055 isoform X1 [Benincasa hispida]2.8e-3990Show/hide
Query:  MTFVSTFISGEPSLLVAKAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        M F+STFISGEPSLLV KA  TA+SVK P QLPLPNLRFARTVTFASASNQATAS RQPRGIMKPRR+SPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
Subjt:  MTFVSTFISGEPSLLVAKAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

TrEMBL top hitse value%identityAlignment
A0A0A0K7S4 PUM-HD domain-containing protein3.0e-7171.73Show/hide
Query:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE
        +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPLIQDV +LS HPYGNYVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVE
Subjt:  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVE

Query:  KCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSKLQEF
        KCLSCCEG  + II+EILE N  ++L+QICTNQYGN+VVQT MS+AKG+  KLL + IKSHW  LQ H YG+NVI S + R KKK+KL ++
Subjt:  KCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSKLQEF

A0A1S3C139 putative pumilio homolog 8, chloroplastic2.0e-6776.69Show/hide
Query:  SLAHARHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLRE
        SL +  +RVVV LIS L+YPCQQW IAL MSPHVLTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLRE
Subjt:  SLAHARHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLRE

Query:  VLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL
        VLI+PLI+D  +LS HPYGNYVIQ+MIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  VLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCL

A0A6J1D5W5 pumilio homolog 12-like6.1e-5651.01Show/hide
Query:  HSLAHARHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLR
        HSL     + VVKL+ RL  P  Q   A+ +S H + LAK    GH VL +CF NLS   NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR
Subjt:  HSLAHARHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLR

Query:  EVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVV
         VL++PLIQ+  +LS H Y N+VIQ++I+LD ANIG R+I  L+NKFV L + K GS+VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV 
Subjt:  EVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVV

Query:  QTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKS
        Q A+SVAKGEAY LL R IKS    L+ HPYG++V+ +   R ++ S
Subjt:  QTAMSVAKGEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKS

A0A6J1GL33 uncharacterized protein LOC1114552442.6e-3885Show/hide
Query:  MTFVSTFISGEPSLLVAKAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        M FVSTF+SGEPSLLVA+A    SSVKHP QLPLPNLRF+RT+TFASASNQ TAS RQPRGIMKPRR+SPEMQALVGAPEISRT+ALKVIW HIKEHNLQ
Subjt:  MTFVSTFISGEPSLLVAKAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

A0A6J1IAA1 uncharacterized protein LOC1114710824.4e-3886Show/hide
Query:  MTFVSTFISGEPSLLVAKAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
        M FVSTF+SGE SLL+A+A    SSVKHP QLPLPNLRF+RT+TFASASNQATAS RQPRGIMKPRR+SPEMQALVGAPEISRTQALKVIWAHIKEHNLQ
Subjt:  MTFVSTFISGEPSLLVAKAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQ

SwissProt top hitse value%identityAlignment
P25339 Pumilio homology domain family member 41.3e-2630.51Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        R + KLI  ++   +   +  ++ P+ + L+KD  G H V++ C   L P   + I   I+ +C ++A ++ GCC+LQ C+++      +  + L   L+
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGW----RIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAM
          VD L++ P+GNYV+QY+I  +     +    +I++ LK + + LS+ KFGSNV+EK L       + +I EIL N  E  +  +  + YGNYV+QTA+
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGW----RIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAM

Query:  SVAKGE---AYKLLGRGIKSHWF-YLQSHPYGKNVI
         ++  +    YK L   +       +++ P+GK +I
Subjt:  SVAKGE---AYKLLGRGIKSHWF-YLQSHPYGKNVI

Q1PFN9 Pumilio homolog 97.5e-2734.04Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        RVV K+I  ++   Q   +   + P  L L KD  G H V++SC   L P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE L++ + 
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK
        ++  +LS  P+GNYV+QY+I    + +  +++ + +  +  L+  KF S+V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV K
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK

Query:  GEA-YKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        G    KL+ +  +  +  L S PY K +   T L+
Subjt:  GEA-YKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

Q9C9R6 Putative pumilio homolog 7, chloroplastic3.9e-3135.04Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        RVV +L+  +R   Q   + LA+ P  L L KD  G H V++ C   LS   N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE LI+ + 
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK
        ++   L+  P+GNY +Q++I+L   +    ++ +LK  +V LSM KF S++VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  K
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK

Query:  GEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        G  +  L   I+ H   L+++PY K +     L+
Subjt:  GEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

Q9LM20 Putative pumilio homolog 8, chloroplastic1.1e-2832.05Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        RVV +L+  ++   Q   +  A+ P  L L +D  G H V++ C   LS   NE I     + C ++A ++ GCC+LQ+CI YS+      RE L++ + 
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK
        ++   L+  PYGNY +Q++++L   +    ++ +LK  +V LSM KF S++VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V K
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK

Query:  GEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        G  +  L   I+ H   L+++PY K +     L+
Subjt:  GEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

Q9LVC3 Pumilio homolog 125.2e-2833.77Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        R V K++   +   +   I  A+   ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    L+S + 
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK
         +   LS  P+GNYV+QY+ +L      + I+ +L+  +  LSM K  SNVVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +K
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK

Query:  GEAYKLLGRGIKSHWFYLQSHPYGKNVI
        G  + LL   IK +   L+++PYGK V+
Subjt:  GEAYKLLGRGIKSHWFYLQSHPYGKNVI

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 87.5e-3032.05Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        RVV +L+  ++   Q   +  A+ P  L L +D  G H V++ C   LS   NE I     + C ++A ++ GCC+LQ+CI YS+      RE L++ + 
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK
        ++   L+  PYGNY +Q++++L   +    ++ +LK  +V LSM KF S++VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V K
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK

Query:  GEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        G  +  L   I+ H   L+++PY K +     L+
Subjt:  GEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

AT1G35730.1 pumilio 95.4e-2834.04Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        RVV K+I  ++   Q   +   + P  L L KD  G H V++SC   L P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE L++ + 
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK
        ++  +LS  P+GNYV+QY+I    + +  +++ + +  +  L+  KF S+V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV K
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK

Query:  GEA-YKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        G    KL+ +  +  +  L S PY K +   T L+
Subjt:  GEA-YKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

AT1G78160.1 pumilio 72.7e-3235.04Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        RVV +L+  +R   Q   + LA+ P  L L KD  G H V++ C   LS   N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE LI+ + 
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK
        ++   L+  P+GNY +Q++I+L   +    ++ +LK  +V LSM KF S++VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  K
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK

Query:  GEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR
        G  +  L   I+ H   L+++PY K +     L+
Subjt:  GEAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLR

AT4G08840.1 pumilio 112.3e-2633.48Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        RVV KLI  +    Q   +  A+ P  L+L ++  G H +L +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS   + +  E L+  + 
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK
        ++   L+  P+GNY++QY+I+      G  ++ EL+  +V L+  KFGS+VVEKCL         I+ E++   N   LLQ   + Y NYV+Q A+S  K
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK

Query:  GEAYKLLGRGIKSHWFYLQSHPYGKNV
        G     L   ++  +  L+  PY K +
Subjt:  GEAYKLLGRGIKSHWFYLQSHPYGKNV

AT5G56510.1 pumilio 123.7e-2933.77Show/hide
Query:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI
        R V K++   +   +   I  A+   ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    L+S + 
Subjt:  RVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLI

Query:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK
         +   LS  P+GNYV+QY+ +L      + I+ +L+  +  LSM K  SNVVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +K
Subjt:  QDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAK

Query:  GEAYKLLGRGIKSHWFYLQSHPYGKNVI
        G  + LL   IK +   L+++PYGK V+
Subjt:  GEAYKLLGRGIKSHWFYLQSHPYGKNVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTCGTCTCCACCTTCATCTCCGGCGAACCGTCCCTCCTTGTCGCCAAAGCCTTCCCCACCGCCTCCTCCGTCAAGCACCCCTGTCAACTCCCTCTGCCT
AATTTGCGCTTCGCCCGCACCGTCACCTTCGCTTCCGCCTCCAACCAAGCCACTGCCTCCCGCCGGCAGCCCCGTGGCATCATGAAGCCCCGCAGAGTTTCGCCG
GAGATGCAGGCGCTTGTCGGCGCTCCTGAGATTTCCCGTACCCAAGCCCTTAAGGTCATTTGGGCTCACATTAAAGAACATAATCTTCAGCATGTTCCTAGGGCC
GCGCATTCTTTGGCCCATGCAAGACATCGAGTCGTGGTGAAGTTAATCTCTCGTTTGAGATACCCTTGTCAACAATGGACCATTGCATTGGCGATGAGTCCCCAC
GTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAGAATAGCA
CAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATA
TCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATA
ATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATT
ATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGA
GAAGCTTATAAGTTACTTGGAAGAGGCATTAAAAGCCATTGGTTTTATCTTCAATCTCATCCGTATGGAAAAAATGTGATTCCATCAACCAAATTACGTGGTAAA
AAGAAGTCAAAATTACAAGAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTCGTCTCCACCTTCATCTCCGGCGAACCGTCCCTCCTTGTCGCCAAAGCCTTCCCCACCGCCTCCTCCGTCAAGCACCCCTGTCAACTCCCTCTGCCT
AATTTGCGCTTCGCCCGCACCGTCACCTTCGCTTCCGCCTCCAACCAAGCCACTGCCTCCCGCCGGCAGCCCCGTGGCATCATGAAGCCCCGCAGAGTTTCGCCG
GAGATGCAGGCGCTTGTCGGCGCTCCTGAGATTTCCCGTACCCAAGCCCTTAAGGTCATTTGGGCTCACATTAAAGAACATAATCTTCAGCATGTTCCTAGGGCC
GCGCATTCTTTGGCCCATGCAAGACATCGAGTCGTGGTGAAGTTAATCTCTCGTTTGAGATACCCTTGTCAACAATGGACCATTGCATTGGCGATGAGTCCCCAC
GTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAGAATAGCA
CAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATA
TCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATA
ATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATT
ATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGA
GAAGCTTATAAGTTACTTGGAAGAGGCATTAAAAGCCATTGGTTTTATCTTCAATCTCATCCGTATGGAAAAAATGTGATTCCATCAACCAAATTACGTGGTAAA
AAGAAGTCAAAATTACAAGAATTTTAA
Protein sequenceShow/hide protein sequence
MTFVSTFISGEPSLLVAKAFPTASSVKHPCQLPLPNLRFARTVTFASASNQATASRRQPRGIMKPRRVSPEMQALVGAPEISRTQALKVIWAHIKEHNLQHVPRA
AHSLAHARHRVVVKLISRLRYPCQQWTIALAMSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLI
SPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG
EAYKLLGRGIKSHWFYLQSHPYGKNVIPSTKLRGKKKSKLQEF