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ClCG02G006880 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G006880
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr02:7962521..7971470
RNA-Seq ExpressionClCG02G006880
SyntenyClCG02G006880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5D2S027 Uncharacterized protein (Fragment)9.8e-0447.89Show/hide
Query:  PAFTRWKWLFRPIDCLL------EAKLYSLAAFLNIF-------CSNGAFRELNSGPLAPKARIIPLDQMP
        P+F    WL   I+C +       A+L  LA  + ++        S GAFRE NSGPLAPKARIIPLDQMP
Subjt:  PAFTRWKWLFRPIDCLL------EAKLYSLAAFLNIF-------CSNGAFRELNSGPLAPKARIIPLDQMP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTCAGTCAGCAAGTAGAGGTGGCAGGCGTCGGCGTACTTGTGGCAGGAAAATCGTGGACCTAGTCCACGAGTTAGCAATCGAAGGGAACCAGTTCGTTCGAAC
TGCAACAATCGCTACTGCAATGGCGAAAGCTGATACGGCGTGTATCACTCAAGAATTCATTACTGTCAGTATTTTAATTGGATATGATCTGCCAGCTTTCACACGTTGGA
AATGGTTATTCAGACCAATTGATTGTTTGCTTGAAGCAAAATTGTACTCTCTGGCTGCTTTCTTGAATATATTCTGTAGTAATGGGGCATTCCGAGAATTGAACTCGGGA
CCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTTTCTTGTACCCATACTTTCTGACATCCTGGAATTTATTATTCAGAACAACCTCTTGTATGGACA
ATGTAAGGGCCTCAAGCTTGTGGGGGGAGATTTACCTTTCCTGGGAATGGTCTATCTATTTACCATGTTAGGTTACTGTGAGTTATCTTGGCATTTTGTAAACAAGAGTT
GTCTTGTAGTGGAGAGGACCAGCTCTCTTGAAAAGCTGGGAAGAAACCTTGTAAACCGTTTCATTTTGTGGTTGAAGGCTTTTATCCCCACGGGGGTTTGTTGCTCCGTG
TGTGTTGCTCTATATTGTGTTGATATTGCAGGTTCAGAGGCAGTGGCTGCCACTGCTTTTTGCAGCACCTTTCTCAGCTTTACTCGGTTTAATTGGTTGAATGGTCTTGC
TGCTTGTTGGGAATTCTTTATATTCCTTGCTGACGTGGATGTGGAACGGTTGCTTCTACCTCAGAAAACTAATGGTAAAAGGTGTGATTTGCGAATCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTCAGTCAGCAAGTAGAGGTGGCAGGCGTCGGCGTACTTGTGGCAGGAAAATCGTGGACCTAGTCCACGAGTTAGCAATCGAAGGGAACCAGTTCGTTCGAAC
TGCAACAATCGCTACTGCAATGGCGAAAGCTGATACGGCGTGTATCACTCAAGAATTCATTACTGTCAGTATTTTAATTGGATATGATCTGCCAGCTTTCACACGTTGGA
AATGGTTATTCAGACCAATTGATTGTTTGCTTGAAGCAAAATTGTACTCTCTGGCTGCTTTCTTGAATATATTCTGTAGTAATGGGGCATTCCGAGAATTGAACTCGGGA
CCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTTTCTTGTACCCATACTTTCTGACATCCTGGAATTTATTATTCAGAACAACCTCTTGTATGGACA
ATGTAAGGGCCTCAAGCTTGTGGGGGGAGATTTACCTTTCCTGGGAATGGTCTATCTATTTACCATGTTAGGTTACTGTGAGTTATCTTGGCATTTTGTAAACAAGAGTT
GTCTTGTAGTGGAGAGGACCAGCTCTCTTGAAAAGCTGGGAAGAAACCTTGTAAACCGTTTCATTTTGTGGTTGAAGGCTTTTATCCCCACGGGGGTTTGTTGCTCCGTG
TGTGTTGCTCTATATTGTGTTGATATTGCAGGTTCAGAGGCAGTGGCTGCCACTGCTTTTTGCAGCACCTTTCTCAGCTTTACTCGGTTTAATTGGTTGAATGGTCTTGC
TGCTTGTTGGGAATTCTTTATATTCCTTGCTGACGTGGATGTGGAACGGTTGCTTCTACCTCAGAAAACTAATGGTAAAAGGTGTGATTTGCGAATCACTTAG
Protein sequenceShow/hide protein sequence
MQIQSASRGGRRRRTCGRKIVDLVHELAIEGNQFVRTATIATAMAKADTACITQEFITVSILIGYDLPAFTRWKWLFRPIDCLLEAKLYSLAAFLNIFCSNGAFRELNSG
PLAPKARIIPLDQMPFLVPILSDILEFIIQNNLLYGQCKGLKLVGGDLPFLGMVYLFTMLGYCELSWHFVNKSCLVVERTSSLEKLGRNLVNRFILWLKAFIPTGVCCSV
CVALYCVDIAGSEAVAATAFCSTFLSFTRFNWLNGLAACWEFFIFLADVDVERLLLPQKTNGKRCDLRIT