CuGenDBv2

Gene ID	ClCG02G007130
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like
Genome location	CG_Chr02:8198909..8203001
RNA-Seq Expression	ClCG02G007130
Synteny	ClCG02G007130
Gene Ontology terms	GO:0009787 - regulation of abscisic acid-activated signaling pathway (biological process) GO:0010100 - negative regulation of photomorphogenesis (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR039324 - Protein SHORT HYPOCOTYL IN WHITE LIGHT 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031378.1 ATP phosphoribosyltransferase regulatory subunit [Cucumis melo var. makuwa]

4.3e-62

90.2

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Query:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL
        MSLPA LSPPSLFSIPQSQPPFPTSRTS LSHPFQIS+TLLRA+RRTSNFSQGVDN VD+RRNWNR   SDFD+IGG EEEE+EEEED+DEEEDRSLDLL
Subjt:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL

Query:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLE
        VRFVENVFRK SRRARKAVRSVLPQSIPTKLV FSVNGVLMLAFLWVLKAFLE
Subjt:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLE

TYK06830.1 ATP phosphoribosyltransferase regulatory subunit [Cucumis melo var. makuwa]

4.3e-62

90.2

Show/hide

Query:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL
        MSLPA LSPPSLFSIPQSQPPFPTSRTS LSHPFQIS+TLLRA+RRTSNFSQGVDN VD+RRNWNR   SDFD+IGG EEEE+EEEED+DEEEDRSLDLL
Subjt:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL

Query:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLE
        VRFVENVFRK SRRARKAVRSVLPQSIPTKLV FSVNGVLMLAFLWVLKAFLE
Subjt:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLE

XP_008455053.1 PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo]

2.5e-62

89.03

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Query:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL
        MSLPA LSPPSLFSIPQSQPPFPTSRTS LSHPFQIS+TLLRA+RRTSNFSQGVDN VD+RRNWNR   SDFD+IGG EEEE+EEEED+DEEEDRSLDLL
Subjt:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL

Query:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL
        VRFVENVFRK SRRARKAVRSVLPQSIPTKLV FSVNGVLMLAFLWVLKAFLE++
Subjt:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL

XP_022988955.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like [Cucurbita maxima]

6.6e-63

88.31

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Query:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDEDEEEDRSLDLLV
        MSLPAALSPPSL+SIP SQPP PTSRTS LSH  QISHTLLRASRRTSNFSQGVD+LVDDRRNWNRSI+SDFDIIGGE++ED+E+E E+EEEDRSLDLLV
Subjt:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL
        RFVENVFRKVS+RARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLW+LKAFLE++
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL

XP_038877542.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1 [Benincasa hispida]

6.2e-69

94.16

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Query:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDEDEEEDRSLDLLV
        MSL AALSPPSLFSIPQSQPPFPTSRTS LSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSI SDFD+IGGEEEED+++EDEDEEEDRSLDLLV
Subjt:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL
        RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLE++
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C0Q8 uncharacterized protein LOC103495323

1.2e-62

89.03

Show/hide

Query:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL
        MSLPA LSPPSLFSIPQSQPPFPTSRTS LSHPFQIS+TLLRA+RRTSNFSQGVDN VD+RRNWNR   SDFD+IGG EEEE+EEEED+DEEEDRSLDLL
Subjt:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL

Query:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL
        VRFVENVFRK SRRARKAVRSVLPQSIPTKLV FSVNGVLMLAFLWVLKAFLE++
Subjt:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL

A0A5A7SL74 ATP phosphoribosyltransferase regulatory subunit

2.1e-62

90.2

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Query:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL
        MSLPA LSPPSLFSIPQSQPPFPTSRTS LSHPFQIS+TLLRA+RRTSNFSQGVDN VD+RRNWNR   SDFD+IGG EEEE+EEEED+DEEEDRSLDLL
Subjt:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL

Query:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLE
        VRFVENVFRK SRRARKAVRSVLPQSIPTKLV FSVNGVLMLAFLWVLKAFLE
Subjt:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLE

A0A5D3C665 ATP phosphoribosyltransferase regulatory subunit

2.1e-62

90.2

Show/hide

Query:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL
        MSLPA LSPPSLFSIPQSQPPFPTSRTS LSHPFQIS+TLLRA+RRTSNFSQGVDN VD+RRNWNR   SDFD+IGG EEEE+EEEED+DEEEDRSLDLL
Subjt:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGG-EEEEDEEEEDEDEEEDRSLDLL

Query:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLE
        VRFVENVFRK SRRARKAVRSVLPQSIPTKLV FSVNGVLMLAFLWVLKAFLE
Subjt:  VRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLE

A0A6J1D3L5 protein SHORT HYPOCOTYL IN WHITE LIGHT 1

6.1e-62

85.9

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Query:  MSLPAALSPPSLFSIPQ--SQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDEDEEEDRSLDL
        MS PAALSPPSLFSIPQ   QP F +SRTS LSHPFQISHTLLRASRR SNFSQGVDNLVDDRRNWNR I+SDFDI+GGE++E++EE++EDEEEDRSLDL
Subjt:  MSLPAALSPPSLFSIPQ--SQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDEDEEEDRSLDL

Query:  LVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL
        LVRFVENVFRKVS+RARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFL+++
Subjt:  LVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL

A0A6J1JL13 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like

3.2e-63

88.31

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Query:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDEDEEEDRSLDLLV
        MSLPAALSPPSL+SIP SQPP PTSRTS LSH  QISHTLLRASRRTSNFSQGVD+LVDDRRNWNRSI+SDFDIIGGE++ED+E+E E+EEEDRSLDLLV
Subjt:  MSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDEDEEEDRSLDLLV

Query:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL
        RFVENVFRKVS+RARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLW+LKAFLE++
Subjt:  RFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELL

SwissProt top hits

e value

%identity

Alignment

F4I3V6 Protein SHORT HYPOCOTYL IN WHITE LIGHT 1

4.0e-10

32.95

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Query:  TMSLPAALSPPSLFSIPQSQPPFPTSRTSFLS-HPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEED--------EEEEDEDE
        T +L ++ S PSL  I  S          F+S  PF  +   LR   R  N S     L     +  R   SD    GG +  D         +++DE++
Subjt:  TMSLPAALSPPSLFSIPQSQPPFPTSRTSFLS-HPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEED--------EEEEDEDE

Query:  EEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELLYEILGDMHT
        E + S+DLL+RF+ ++F+KVS+R +KA R +LP ++  +LV F+V+G+L+L  L + +AFLE++  + G + T
Subjt:  EEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELLYEILGDMHT

Arabidopsis top hits

e value

%identity

Alignment

AT1G69935.1 short hypocotyl in white light1

2.8e-11

32.95

Show/hide

Query:  TMSLPAALSPPSLFSIPQSQPPFPTSRTSFLS-HPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEED--------EEEEDEDE
        T +L ++ S PSL  I  S          F+S  PF  +   LR   R  N S     L     +  R   SD    GG +  D         +++DE++
Subjt:  TMSLPAALSPPSLFSIPQSQPPFPTSRTSFLS-HPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEED--------EEEEDEDE

Query:  EEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELLYEILGDMHT
        E + S+DLL+RF+ ++F+KVS+R +KA R +LP ++  +LV F+V+G+L+L  L + +AFLE++  + G + T
Subjt:  EEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELLYEILGDMHT

AT4G33780.1 FUNCTIONS IN: molecular_function unknown

1.9e-31

67.86

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Query:  ASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDED-EEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLML
        ASRR+ +F  G D+  DD R+WNR I  ++   G +E+ D EE+D+D EEEDRSLDLL+RFVENVFRK+S+RARKAVRS+LP SI TKLVGFSVNGVL+L
Subjt:  ASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEEEEDED-EEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLML

Query:  AFLWVLKAFLEL
        AFLW+LKAFLE+
Subjt:  AFLWVLKAFLEL

Sequences

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CDS sequence

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ATGGAATTCTCAGCTCCGCTTCGCCACTCTCAAAATAGGCCAGGAAGGAAACTCCTGTTTCTTCTTCAACACCTGACTATGTCCTTACCTGCCGCTCTTTCACCGCCGTC
CCTCTTCTCCATTCCTCAATCTCAACCGCCATTTCCAACCTCTAGAACCTCCTTTCTCTCCCATCCCTTCCAAATTTCTCACACGCTCCTCCGGGCTTCCAGAAGAACCT
CCAATTTCTCTCAGGGAGTTGATAATTTGGTGGACGATCGACGCAATTGGAACCGCTCGATTAACTCCGACTTCGACATAATCGGTGGAGAGGAAGAGGAGGATGAGGAG
GAGGAGGATGAAGATGAGGAAGAGGATAGAAGTTTGGATCTATTGGTTCGGTTTGTTGAGAATGTTTTCAGGAAAGTCTCGAGGCGAGCTCGGAAGGCTGTGAGATCGGT
TCTTCCCCAATCCATCCCTACGAAACTGGTGGGATTTTCTGTTAATGGGGTGCTAATGCTGGCGTTTTTGTGGGTTTTGAAGGCATTTCTTGAGCTGCTATATGAAATCT
TAGGTGATATGCACACTTGGAACTGCAGTGTTTGTGAGCATACTCATTATTCGTGGAGTGTGGATTGGCATCTTATATCTGCAAGATACCCGCAGCCACAGACTCAATCA
ACTCGATGA

mRNA sequence

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Protein sequence

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MEFSAPLRHSQNRPGRKLLFLLQHLTMSLPAALSPPSLFSIPQSQPPFPTSRTSFLSHPFQISHTLLRASRRTSNFSQGVDNLVDDRRNWNRSINSDFDIIGGEEEEDEE
EEDEDEEEDRSLDLLVRFVENVFRKVSRRARKAVRSVLPQSIPTKLVGFSVNGVLMLAFLWVLKAFLELLYEILGDMHTWNCSVCEHTHYSWSVDWHLISARYPQPQTQS
TR

ClCG02G007130 (gene) of Watermelon (Charleston Gray) v2.5 genome