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ClCG02G007280 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G007280
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionbasic form of pathogenesis-related protein 1-like
Genome locationCG_Chr02:8446419..8449593
RNA-Seq ExpressionClCG02G007280
SyntenyClCG02G007280
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137080.2 pathogenesis-related protein 1A [Cucumis sativus]3.0e-1152.94Show/hide
Query:  MAFANILSAIFL------MALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAE
        M FANILS + L      + LTLTLAS  P LA S PK                     + L     NYANTKI TCQMEHSGGPYGENLAEG E+MTAE
Subjt:  MAFANILSAIFL------MALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAE

Query:  TA
        TA
Subjt:  TA

XP_008455069.1 PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]7.6e-1558.33Show/hide
Query:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA
        M FANILS   L+ LTLTLAS  PILA SYPK                     + L     NYANTKI TCQMEHSGGPYGENLAEGYE MTAE A
Subjt:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA

XP_022988978.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima]1.6e-0948.96Show/hide
Query:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA
        MA  NIL  I L+ + LTL +I P +ANS PK                       L T    YA +KITTC+MEHSGGPYGENLA GYE +TAETA
Subjt:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA

XP_023531881.1 basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]6.3e-0947.92Show/hide
Query:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA
        MA  NIL AI L+ + LTL +I P +ANS PK                       L T    YA +KI TC+M HSGGPYGENLA GYE +TAETA
Subjt:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA

XP_038888921.1 basic form of pathogenesis-related protein 1-like [Benincasa hispida]2.0e-1558.33Show/hide
Query:  MAFANILSAIFLMALTLTLASIVPILANSYPKTTL--------------------LPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA
        MAFAN+LS++ L+ALTL LA I PI A SYPK  +                    L     NYANTKI TCQMEHSGGPYGENLAEGYE+MTAETA
Subjt:  MAFANILSAIFLMALTLTLASIVPILANSYPKTTL--------------------LPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA

TrEMBL top hitse value%identityAlignment
A0A0A0K7N5 SCP domain-containing protein1.5e-1152.94Show/hide
Query:  MAFANILSAIFL------MALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAE
        M FANILS + L      + LTLTLAS  P LA S PK                     + L     NYANTKI TCQMEHSGGPYGENLAEG E+MTAE
Subjt:  MAFANILSAIFL------MALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAE

Query:  TA
        TA
Subjt:  TA

A0A1S3C0S3 basic form of pathogenesis-related protein 1-like3.7e-1558.33Show/hide
Query:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA
        M FANILS   L+ LTLTLAS  PILA SYPK                     + L     NYANTKI TCQMEHSGGPYGENLAEGYE MTAE A
Subjt:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA

A0A5A7SPC2 Basic form of pathogenesis-related protein 1-like3.7e-1558.33Show/hide
Query:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA
        M FANILS   L+ LTLTLAS  PILA SYPK                     + L     NYANTKI TCQMEHSGGPYGENLAEGYE MTAE A
Subjt:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA

A0A6J1EJ50 basic form of pathogenesis-related protein 1-like5.2e-0946.88Show/hide
Query:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA
        MA  NIL AI L+ + LTL++I P +ANS PK                       + T    YA +KI TC+M HSGGPYGENLA GYE +TAETA
Subjt:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA

A0A6J1JNW9 basic form of pathogenesis-related protein 1-like8.0e-1048.96Show/hide
Query:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA
        MA  NIL  I L+ + LTL +I P +ANS PK                       L T    YA +KITTC+MEHSGGPYGENLA GYE +TAETA
Subjt:  MAFANILSAIFLMALTLTLASIVPILANSYPK--------------------TTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTTGCCAACATTCTCTCTGCCATTTTCTTGATGGCGCTAACCCTAACTCTAGCTTCCATTGTGCCCATCTTGGCCAATAGCTACCCAAAAACTACATTGCTGCC
CACAACGCCATCCAATTACGCCAACACAAAGATCACTACTTGTCAAATGGAGCACTCTGGAGGACCTTATGGTGAGAACCTAGCGGAGGGATACGAAATGATGACAGCAG
AGACAGCACCATTGCCTCCATTATACACAGTTGGTGTGGAGGAACACCAAATCTGTTGGTTGTGCCCAAGTGAATTCTGGAATCGTAAGCTTGAGAATGTTAAGTATGGG
GTTAGGCTAGGGGGTTTAAGTAGCCTAGGTTTAAGAAAATTGTTTTTGGAGTCCAAGTTTTGGATGTCTAAGTTTAAGAAGCCTATGTTTGGAGTTGGCTGGTGGAGTAG
GTGGCGGAAGTTTTCCAGTGGGAGGAAGGGGGAGGGGTTGCCAAAGGTTGGCCGACGGCAATCATCGAAGGTGGTGGCTAAAGGTTGGTTGGCCCTGGAGGTGGTGGCCA
GAGGGGAGGGGTCGCCGGAGGTTGGTCAGCGGCAATCATCGGAGATGGCAGTTGGAGGTTGGTCGACCTTGAAGGTGGTGGCTGAAGTTGGCCAATGGGGTCGTCAAAAG
TCGCCAGAGGTGGACCGGCGACAATCACTTCAGGTGGCAGTTGTAGGTTGGTTAGCTAGTAGTAGCCGCCGGAGGTGGCGGCCGCAATTGATCGACAGTGGTCCGCGGAA
GTGTTGGCCAGAGTTGGCCACCAAAGGTCGTCAGAGTGCATTTAATGCTGGCCTTTTCAAACCCAAACTTTTTGATAATGTTCTCGATGTATTTGGACTGAGAGATGAAG
AATCCTCATTTAATTGTTTGATCTCAAACCCCAGAAATGGGAACAAGTCATCTTTGCAGGGAACTAAGGACATTCCTAGCCTTAACTTGTATTCGAATGGTCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATTTGCCAACATTCTCTCTGCCATTTTCTTGATGGCGCTAACCCTAACTCTAGCTTCCATTGTGCCCATCTTGGCCAATAGCTACCCAAAAACTACATTGCTGCC
CACAACGCCATCCAATTACGCCAACACAAAGATCACTACTTGTCAAATGGAGCACTCTGGAGGACCTTATGGTGAGAACCTAGCGGAGGGATACGAAATGATGACAGCAG
AGACAGCACCATTGCCTCCATTATACACAGTTGGTGTGGAGGAACACCAAATCTGTTGGTTGTGCCCAAGTGAATTCTGGAATCGTAAGCTTGAGAATGTTAAGTATGGG
GTTAGGCTAGGGGGTTTAAGTAGCCTAGGTTTAAGAAAATTGTTTTTGGAGTCCAAGTTTTGGATGTCTAAGTTTAAGAAGCCTATGTTTGGAGTTGGCTGGTGGAGTAG
GTGGCGGAAGTTTTCCAGTGGGAGGAAGGGGGAGGGGTTGCCAAAGGTTGGCCGACGGCAATCATCGAAGGTGGTGGCTAAAGGTTGGTTGGCCCTGGAGGTGGTGGCCA
GAGGGGAGGGGTCGCCGGAGGTTGGTCAGCGGCAATCATCGGAGATGGCAGTTGGAGGTTGGTCGACCTTGAAGGTGGTGGCTGAAGTTGGCCAATGGGGTCGTCAAAAG
TCGCCAGAGGTGGACCGGCGACAATCACTTCAGGTGGCAGTTGTAGGTTGGTTAGCTAGTAGTAGCCGCCGGAGGTGGCGGCCGCAATTGATCGACAGTGGTCCGCGGAA
GTGTTGGCCAGAGTTGGCCACCAAAGGTCGTCAGAGTGCATTTAATGCTGGCCTTTTCAAACCCAAACTTTTTGATAATGTTCTCGATGTATTTGGACTGAGAGATGAAG
AATCCTCATTTAATTGTTTGATCTCAAACCCCAGAAATGGGAACAAGTCATCTTTGCAGGGAACTAAGGACATTCCTAGCCTTAACTTGTATTCGAATGGTCACTGA
Protein sequenceShow/hide protein sequence
MAFANILSAIFLMALTLTLASIVPILANSYPKTTLLPTTPSNYANTKITTCQMEHSGGPYGENLAEGYEMMTAETAPLPPLYTVGVEEHQICWLCPSEFWNRKLENVKYG
VRLGGLSSLGLRKLFLESKFWMSKFKKPMFGVGWWSRWRKFSSGRKGEGLPKVGRRQSSKVVAKGWLALEVVARGEGSPEVGQRQSSEMAVGGWSTLKVVAEVGQWGRQK
SPEVDRRQSLQVAVVGWLASSSRRRWRPQLIDSGPRKCWPELATKGRQSAFNAGLFKPKLFDNVLDVFGLRDEESSFNCLISNPRNGNKSSLQGTKDIPSLNLYSNGH