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ClCG02G007570 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G007570
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPhotosystem II protein N
Genome locationCG_Chr02:8942623..8943342
RNA-Seq ExpressionClCG02G007570
SyntenyClCG02G007570
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI23505.3 unnamed protein product, partial [Vitis vinifera]3.0e-1671.43Show/hide
Query:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        METATLVAISIS                LSTTKRSIRGTRGLVEIM+ +F FLV +LGGSRKKIAKKIIPRVETKRN
Subjt:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

KAG4162184.1 hypothetical protein ERO13_D01G102047v2, partial [Gossypium hirsutum]1.1e-2187.1Show/hide
Query:  FYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        FYWV LIYCFWATLST KRSIRGTRGL+EIM+NHF FLV  LGGSRKKIAKKIIPRV+TKRN
Subjt:  FYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

TYH41368.1 hypothetical protein ES332_D12G311800v1 [Gossypium tomentosum]3.0e-1668.83Show/hide
Query:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        MET TLVAISISGLL           AT+ST KRSI+GT+GL+EIM+NHF FLV  LG S KKIAKKIIPRV+TKRN
Subjt:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

TYI78999.1 hypothetical protein E1A91_D06G254300v1 [Gossypium mustelinum]1.1e-2187.1Show/hide
Query:  FYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        FYWV LIYCFWATLST KRSIRGTRGL+EIM+NHF FLV  LGGSRKKIAKKIIPRV+TKRN
Subjt:  FYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

YP_009676110.1 photosystem II protein N [Berchemiella wilsonii]5.8e-2072.73Show/hide
Query:  FYWVCLIYCFWATLSTTKRSIRGTRGLV---------------EIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        FYWV LIYCFWATLSTTKRSIRGTR LV               EIM+NHF FLVGTLGGSRKKIAKK+IP+VETKRN
Subjt:  FYWVCLIYCFWATLSTTKRSIRGTRGLV---------------EIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

TrEMBL top hitse value%identityAlignment
A0A4Y5WYC3 Photosystem II protein N2.8e-2072.73Show/hide
Query:  FYWVCLIYCFWATLSTTKRSIRGTRGLV---------------EIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        FYWV LIYCFWATLSTTKRSIRGTR LV               EIM+NHF FLVGTLGGSRKKIAKK+IP+VETKRN
Subjt:  FYWVCLIYCFWATLSTTKRSIRGTRGLV---------------EIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

A0A5D2ADY2 Uncharacterized protein2.5e-1668.83Show/hide
Query:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        MET TLVAISISGLL           ATLST KRSI+GT+GL+EIM+NHF FLV  LG S KKIAKKIIPRV+TKR+
Subjt:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

A0A5D2IFR0 Uncharacterized protein1.4e-1668.83Show/hide
Query:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        MET TLVAISISGLL           AT+ST KRSI+GT+GL+EIM+NHF FLV  LG S KKIAKKIIPRV+TKRN
Subjt:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

A0A5D2UMG6 Uncharacterized protein7.2e-1668.83Show/hide
Query:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        METATLVAISISGLL                  RSIRGTRGL+EIM+NHF FLV  LGGSRKKIAKKIIPRV+TKRN
Subjt:  METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

A0A5D2UN66 Uncharacterized protein5.1e-2287.1Show/hide
Query:  FYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN
        FYWV LIYCFWATLST KRSIRGTRGL+EIM+NHF FLV  LGGSRKKIAKKIIPRV+TKRN
Subjt:  FYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAGCAACCCTAGTTGCCATCTCTATATCTGGTTTACTTTTTTACTGGGTATGCCTTATATACTGCTTTTGGGCAACCCTCTCAACAACTAAGAGATCCATTCG
AGGAACACGGGGACTAGTTGAAATAATGAGAAATCATTTCGCCTTTTTAGTTGGAACTTTAGGCGGTTCGCGAAAAAAGATAGCGAAAAAAATTATTCCTAGAGTCGAGA
CTAAGAGGAATTTTTTGGAATGCCCCAAATTCTACTTGAGCGTCCAAATCTGGGTCAATCCCAGCAAAGACATCTCTGAACAAGGTTCTAGCACCATGCCAAATGTGTCC
GAAGAAGAAGAGCAAAGCAAACGAAGCATGCCCAAAAGTAAACCAACCCCTTGGACTGCTACGAAAAACCCCATCGAATTTCAAAGTAGCACGATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACAGCAACCCTAGTTGCCATCTCTATATCTGGTTTACTTTTTTACTGGGTATGCCTTATATACTGCTTTTGGGCAACCCTCTCAACAACTAAGAGATCCATTCG
AGGAACACGGGGACTAGTTGAAATAATGAGAAATCATTTCGCCTTTTTAGTTGGAACTTTAGGCGGTTCGCGAAAAAAGATAGCGAAAAAAATTATTCCTAGAGTCGAGA
CTAAGAGGAATTTTTTGGAATGCCCCAAATTCTACTTGAGCGTCCAAATCTGGGTCAATCCCAGCAAAGACATCTCTGAACAAGGTTCTAGCACCATGCCAAATGTGTCC
GAAGAAGAAGAGCAAAGCAAACGAAGCATGCCCAAAAGTAAACCAACCCCTTGGACTGCTACGAAAAACCCCATCGAATTTCAAAGTAGCACGATCTAA
Protein sequenceShow/hide protein sequence
METATLVAISISGLLFYWVCLIYCFWATLSTTKRSIRGTRGLVEIMRNHFAFLVGTLGGSRKKIAKKIIPRVETKRNFLECPKFYLSVQIWVNPSKDISEQGSSTMPNVS
EEEEQSKRSMPKSKPTPWTATKNPIEFQSSTI