; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G007730 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G007730
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionShikimate dehydrogenase
Genome locationCG_Chr02:9404038..9405504
RNA-Seq ExpressionClCG02G007730
SyntenyClCG02G007730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT11648.1 Os10g0514550 [Oryza sativa Japonica Group]6.5e-1739.9Show/hide
Query:  QILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGN
        QIL P PNGI  I   PV ++ S S     +NLS +NSIG SH+   L ISA  K TV   G   +P  + SS   CG AK PGGC  + S +TAFRYG 
Subjt:  QILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGN

Query:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS
        F+ SSSV+ S+  +  ++  IS +S  W+ G+ T  A+ HC           RNS   L IS S   R   SSG             +S S+S + CS
Subjt:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS

KAB8113308.1 hypothetical protein EE612_052273 [Oryza sativa]2.9e-0944.17Show/hide
Query:  ILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNF
        IL P PNGI  I   PV ++ S S     +NLS +N IG SH+   L ISA  K TV   G   +P  + SS   C   KCP GC  + S +TAFRYG F
Subjt:  ILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNF

Query:  FTSSSVMCSFDDVP-SIISS
          SSSV+ S+  +  ++ISS
Subjt:  FTSSSVMCSFDDVP-SIISS

KAB8113312.1 hypothetical protein EE612_052276 [Oryza sativa]2.1e-1538.89Show/hide
Query:  QILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGN
        QIL P PNGI  I   PV ++ S S     +NLS +N IG SH+   L ISA  K TV   G   +P  + SS   CG AK PGGC  + S +TAFRYG 
Subjt:  QILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGN

Query:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS
         + SSSV+ S+  +  ++  IS +S  W+ G+ T  A+ HC           RNS   L IS S   R   SSG             +S S+S + CS
Subjt:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS

KAG8649971.1 hypothetical protein MANES_08G163522v8, partial [Manihot esculenta]4.2e-1650.38Show/hide
Query:  GQILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYG
        GQILLP P GI  IS  PV     S +S   KNLS LN+IGSSHT     ISA  K  V   GT N PS T SS+T CG  KCPGGCRL  S ITAFRYG
Subjt:  GQILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYG

Query:  NFFTSSSVMCSFDDVPSIISS-----ISLYSFS
               ++C +  + S+ S+     IS+ SFS
Subjt:  NFFTSSSVMCSFDDVPSIISS-----ISLYSFS

TVU31354.1 hypothetical protein EJB05_23037, partial [Eragrostis curvula]1.7e-0949.02Show/hide
Query:  PPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNFFTS
        P PNGI LIS  PV +  S S     +N S  NS+G SHT   + +SA  K TVV  G   +P ++ SS   CGR  CPGG R + SI TAFRYG   TS
Subjt:  PPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNFFTS

Query:  SS
        SS
Subjt:  SS

TrEMBL top hitse value%identityAlignment
A0A0E0EZV5 Uncharacterized protein4.5e-1640.31Show/hide
Query:  QILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGN
        QILLP PNGI   S  PV TST S S    +N S +NSIG SH+   L ISA  K TV   G   +P  + SS   CG  K  GGC  + S +TAFRYG 
Subjt:  QILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGN

Query:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRFSSGKCRFINGKMCSDFVSDSISLFLCS
           SSSV+ S+     ++  IS +S  W+ G+ T  A+ HC          LRNS     I+ SSS R  S     ++G++     S S+S + CS
Subjt:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRFSSGKCRFINGKMCSDFVSDSISLFLCS

A0A0P0XW62 Os10g0514550 protein3.2e-1739.9Show/hide
Query:  QILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGN
        QIL P PNGI  I   PV ++ S S     +NLS +NSIG SH+   L ISA  K TV   G   +P  + SS   CG AK PGGC  + S +TAFRYG 
Subjt:  QILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGN

Query:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS
        F+ SSSV+ S+  +  ++  IS +S  W+ G+ T  A+ HC           RNS   L IS S   R   SSG             +S S+S + CS
Subjt:  FFTSSSVMCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRF--SSGKCRFINGKMCSDFVSDSISLFLCS

A0A0P0XWM5 Os10g0514425 protein1.4e-0945Show/hide
Query:  ILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNF
        IL P PNGI  I   PV ++ S S     +NLS +N IG SH+   L ISA  K TV   G   +P  + SS   CG AK P GC  + S +TAFRYG F
Subjt:  ILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNF

Query:  FTSSSVMCSFDDVP-SIISS
        + SSSV+ S+  +  ++ISS
Subjt:  FTSSSVMCSFDDVP-SIISS

A0A103XV92 Uncharacterized protein4.1e-0952.81Show/hide
Query:  SSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNFFTSSSVMCSFDDVP
        SSF+KNLS LNSIGSSHT     ISA  K  V  SG   +PS +TS VT CG  + P GC L  S  TAFRYG F  SSS +      P
Subjt:  SSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNFFTSSSVMCSFDDVP

A0A5J9V752 Uncharacterized protein (Fragment)8.3e-1049.02Show/hide
Query:  PPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNFFTS
        P PNGI LIS  PV +  S S     +N S  NS+G SHT   + +SA  K TVV  G   +P ++ SS   CGR  CPGG R + SI TAFRYG   TS
Subjt:  PPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNFFTS

Query:  SS
        SS
Subjt:  SS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGGCAGATTCTTCTCCCTCCCCCAAATGGCATAAATCTAATCTCCTTCTTCCCCGTCAGAACCTCCACTTCATCTTCCTCTTCCTCCTTCCTCAAGAATCTCTC
CGCCCTGAACTCCATCGGCTCTTCCCACACTTCCCCATTCCTCGCCATCTCCGCCGCCGCAAAATGCACCGTCGTTTTCTCCGGCACCACGAATTTCCCGTCCAACACCA
CCTCCTCTGTCACCAAATGTGGTAGAGCCAAATGCCCTGGCGGATGCCGCCTCAAGGTTTCCATTATCACCGCCTTCAGGTACGGCAACTTCTTCACATCCTCTTCTGTT
ATGTGTTCTTTCGATGATGTTCCATCGATCATCTCATCCATCTCTCTGTATAGCTTCTCTTGGATTTCTGGATATTTTACGATGTTTGCCATTGCCCATTGCATCACCAC
TACTACGGAATGGACGATTCCGTTGAGAAATTCCGCGCATAGGCTGATGATTTCACCTTCTTCAAGCTTTCGATTCTCTTCTGGTAAGTGTAGGTTTATCAATGGCAAAA
TGTGTTCTGATTTTGTTTCTGATTCTATTTCGTTGTTCCTTTGTTCGATTTCACGTTGTCTTTCGTTGAATCGAGCTTCAATTAGAGGAATTATTGCAGTTTCAACTTCG
TTTCGAAGTGTTGTGAGTTCATTCCAGAGATTCGGAGGAATTTCCCCAATTTTAATGGATATTGATTCAGTTTGTTTTGGCTGCTGGAATACAATAGAACGCGATGGAGG
AGATCGGCTAGGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGGGCAGATTCTTCTCCCTCCCCCAAATGGCATAAATCTAATCTCCTTCTTCCCCGTCAGAACCTCCACTTCATCTTCCTCTTCCTCCTTCCTCAAGAATCTCTC
CGCCCTGAACTCCATCGGCTCTTCCCACACTTCCCCATTCCTCGCCATCTCCGCCGCCGCAAAATGCACCGTCGTTTTCTCCGGCACCACGAATTTCCCGTCCAACACCA
CCTCCTCTGTCACCAAATGTGGTAGAGCCAAATGCCCTGGCGGATGCCGCCTCAAGGTTTCCATTATCACCGCCTTCAGGTACGGCAACTTCTTCACATCCTCTTCTGTT
ATGTGTTCTTTCGATGATGTTCCATCGATCATCTCATCCATCTCTCTGTATAGCTTCTCTTGGATTTCTGGATATTTTACGATGTTTGCCATTGCCCATTGCATCACCAC
TACTACGGAATGGACGATTCCGTTGAGAAATTCCGCGCATAGGCTGATGATTTCACCTTCTTCAAGCTTTCGATTCTCTTCTGGTAAGTGTAGGTTTATCAATGGCAAAA
TGTGTTCTGATTTTGTTTCTGATTCTATTTCGTTGTTCCTTTGTTCGATTTCACGTTGTCTTTCGTTGAATCGAGCTTCAATTAGAGGAATTATTGCAGTTTCAACTTCG
TTTCGAAGTGTTGTGAGTTCATTCCAGAGATTCGGAGGAATTTCCCCAATTTTAATGGATATTGATTCAGTTTGTTTTGGCTGCTGGAATACAATAGAACGCGATGGAGG
AGATCGGCTAGGGCTTTGA
Protein sequenceShow/hide protein sequence
MLGQILLPPPNGINLISFFPVRTSTSSSSSSFLKNLSALNSIGSSHTSPFLAISAAAKCTVVFSGTTNFPSNTTSSVTKCGRAKCPGGCRLKVSIITAFRYGNFFTSSSV
MCSFDDVPSIISSISLYSFSWISGYFTMFAIAHCITTTTEWTIPLRNSAHRLMISPSSSFRFSSGKCRFINGKMCSDFVSDSISLFLCSISRCLSLNRASIRGIIAVSTS
FRSVVSSFQRFGGISPILMDIDSVCFGCWNTIERDGGDRLGL