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ClCG02G008860 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G008860
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPlant transposase
Genome locationCG_Chr02:12168913..12169644
RNA-Seq ExpressionClCG02G008860
SyntenyClCG02G008860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060466.1 Plant transposase [Cucumis melo var. makuwa]7.3e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

XP_016901234.1 PREDICTED: uncharacterized protein LOC103493280 isoform X2 [Cucumis melo]7.3e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

XP_016901237.1 PREDICTED: uncharacterized protein LOC103493280 isoform X4 [Cucumis melo]7.3e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

XP_016901238.1 PREDICTED: uncharacterized protein LOC103493280 isoform X5 [Cucumis melo]7.3e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

XP_016901240.1 PREDICTED: uncharacterized protein LOC103493280 isoform X7 [Cucumis melo]7.3e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

TrEMBL top hitse value%identityAlignment
A0A1S4DZ27 uncharacterized protein LOC103493280 isoform X23.5e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

A0A1S4DZ35 uncharacterized protein LOC103493280 isoform X43.5e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

A0A1S4DZ36 uncharacterized protein LOC103493280 isoform X13.5e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

A0A1S4DZ41 uncharacterized protein LOC103493280 isoform X53.5e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

A0A5D3D4T6 Plant transposase3.5e-2042.68Show/hide
Query:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS
        DN+G  T S N+ NDA SKVLGP +G    LGFG I+                                        SEHLSNA+NE ++NNVAID + S
Subjt:  DNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAII----------------------------------------SEHLSNASNEPLINNVAIDSVIS

Query:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL
        +P SIN+NNALRKCK+LDW G GEVVA                    +A+RVWVDLP + DAFL
Subjt:  TPSSINNNNALRKCKLLDWYGIGEVVA--------------------KAMRVWVDLPIKHDAFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATGAAGGGACAAACACTTCCTCAACTAATATGAAAAATGATGCAACAAGCAAAGTTCTTGGTCCTAAACGTGGTCATATTAGAGGACTTGGATTTGGG
GCAATTATAAGTGAACATCTCTCTAATGCTTCAAATGAACCCTTGATTAACAATGTTGCTATTGACTCAGTGATATCTACACCTTCGAGTATTAACAATAATAAT
GCTCTTCGCAAGTGCAAGTTGCTAGATTGGTATGGTATAGGAGAGGTAGTTGCTAAAGCAATGAGAGTTTGGGTAGACTTGCCAATAAAACATGATGCATTTTTA
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAATGAAGGGACAAACACTTCCTCAACTAATATGAAAAATGATGCAACAAGCAAAGTTCTTGGTCCTAAACGTGGTCATATTAGAGGACTTGGATTTGGG
GCAATTATAAGTGAACATCTCTCTAATGCTTCAAATGAACCCTTGATTAACAATGTTGCTATTGACTCAGTGATATCTACACCTTCGAGTATTAACAATAATAAT
GCTCTTCGCAAGTGCAAGTTGCTAGATTGGTATGGTATAGGAGAGGTAGTTGCTAAAGCAATGAGAGTTTGGGTAGACTTGCCAATAAAACATGATGCATTTTTA
TAG
Protein sequenceShow/hide protein sequence
MDNEGTNTSSTNMKNDATSKVLGPKRGHIRGLGFGAIISEHLSNASNEPLINNVAIDSVISTPSSINNNNALRKCKLLDWYGIGEVVAKAMRVWVDLPIKHDAFL