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ClCG02G009330 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G009330
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationCG_Chr02:13799532..13800414
RNA-Seq ExpressionClCG02G009330
SyntenyClCG02G009330
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003656 - Zinc finger, BED-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031947.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]6.7e-2970.09Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         NT G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.6e-2869.16Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         N  G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.6e-2869.16Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         N  G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
TYK08901.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.6e-2869.16Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         N  G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
TYK16769.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]6.7e-2970.09Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         NT G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
TrEMBL top hitse value%identityAlignment
A0A5A7SRD2 Zinc finger BED domain-containing protein RICESLEEPER 2-like3.3e-2970.09Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         NT G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.2e-2869.16Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         N  G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.2e-2869.16Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         N  G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
A0A5D3CAM1 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.2e-2869.16Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         N  G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
A0A5D3D2K8 Zinc finger BED domain-containing protein RICESLEEPER 2-like3.3e-2970.09Show/hide
Query:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN
        SSG  S+T  SPSLSPS +PS         NT G  SSSKPPL  KK+ R+TK TTSTVWDHFTK E NS+RCTCNY  KEY CDTTSCGTSTLWKHLKN
Subjt:  SSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGISSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKN

Query:  QCKKYSY
        QCKKY Y
Subjt:  QCKKYSY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTCCATTCTCCTATCCCGTTCTCCCTCTCAGACACTCAGCTTGGCAGTATCGCTGACTCGCTGTCGCTCTCCTCGCACTTGCAGCGGCAGTGTCGCTCTCCTTT
CGATCTCGCTCTCCTCTCAGTTCTTCCAGCAGTGGCCGATTTCGAGGTTTGTAATTTTGTTCTCCCTATTGCCAAATTCACTTCTGGGTTGTGGTTGTTTGTTAATATTA
TGGAGAGCAGTGGAAATCTTAGTCAAACTAGTCCTAGTCCTAGTCTTAGTCCTAGTCATAGTCCTAGTGCCGCTCCCCTCGATCCTGTCGTTGCTAATACAATTGGAATT
AGTAGTTCAAGTAAACCACCATTACATTCTAAGAAGAGATCTAGATCTACTAAGACAACAACCTCCACTGTATGGGATCACTTCACAAAGTTTGAAAATAACAGTAATAG
GTGCACGTGCAATTATTATGGTAAAGAGTATGCATGTGATACTACTTCTTGTGGGACTAGCACATTATGGAAACACTTAAAAAATCAGTGTAAGAAGTATTCATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTCCATTCTCCTATCCCGTTCTCCCTCTCAGACACTCAGCTTGGCAGTATCGCTGACTCGCTGTCGCTCTCCTCGCACTTGCAGCGGCAGTGTCGCTCTCCTTT
CGATCTCGCTCTCCTCTCAGTTCTTCCAGCAGTGGCCGATTTCGAGGTTTGTAATTTTGTTCTCCCTATTGCCAAATTCACTTCTGGGTTGTGGTTGTTTGTTAATATTA
TGGAGAGCAGTGGAAATCTTAGTCAAACTAGTCCTAGTCCTAGTCTTAGTCCTAGTCATAGTCCTAGTGCCGCTCCCCTCGATCCTGTCGTTGCTAATACAATTGGAATT
AGTAGTTCAAGTAAACCACCATTACATTCTAAGAAGAGATCTAGATCTACTAAGACAACAACCTCCACTGTATGGGATCACTTCACAAAGTTTGAAAATAACAGTAATAG
GTGCACGTGCAATTATTATGGTAAAGAGTATGCATGTGATACTACTTCTTGTGGGACTAGCACATTATGGAAACACTTAAAAAATCAGTGTAAGAAGTATTCATATTAG
Protein sequenceShow/hide protein sequence
MSLHSPIPFSLSDTQLGSIADSLSLSSHLQRQCRSPFDLALLSVLPAVADFEVCNFVLPIAKFTSGLWLFVNIMESSGNLSQTSPSPSLSPSHSPSAAPLDPVVANTIGI
SSSSKPPLHSKKRSRSTKTTTSTVWDHFTKFENNSNRCTCNYYGKEYACDTTSCGTSTLWKHLKNQCKKYSY