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ClCG02G009690 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G009690
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationCG_Chr02:15158577..15161327
RNA-Seq ExpressionClCG02G009690
SyntenyClCG02G009690
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649972.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]3.3e-3793.26Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        S FRSFSGSARRAAAHIGSQ KPS SSPFRMAT+KPLSHRTFRCAPEMSFCLESMMPFHS SSSALMTSMLSI+RHSCGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

XP_011649974.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]7.5e-3793.26Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        S FRSFSGSARRAAAHIGSQ K SSSSPFRMAT+KPLSHRTFRCAPEMSFCLESMMPFHS SSSALMTSMLSI+RHSCGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

XP_016901844.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]3.1e-3589.89Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        S FRSFSGSARRAAAHIGSQ KPSS+SPFRMAT+KP SH TFRCAP MSFCLESMMPFHS SSSALMTSMLSI+RHSCGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

XP_016901879.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]8.2e-3691.01Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        S FRSFSGSARRAAAHIGSQ KPSS+SPFRMAT+KPLSH TFRCAP MSFCLESMMPFHS SSSALMTSMLSI+RHSCGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

XP_038901103.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]7.5e-3792.13Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        S FRSFSGSARRAA HIGSQA+PSS+SPFRMAT+KPLSHRTFRCAP MSFCLESMMPFHSASSSALMTSMLSI+RHSCGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

TrEMBL top hitse value%identityAlignment
A0A1S4E0U8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.5e-3589.89Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        S FRSFSGSARRAAAHIGSQ KPSS+SPFRMAT+KP SH TFRCAP MSFCLESMMPFHS SSSALMTSMLSI+RHSCGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

A0A1S4E0Y3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X14.0e-3691.01Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        S FRSFSGSARRAAAHIGSQ KPSS+SPFRMAT+KPLSH TFRCAP MSFCLESMMPFHS SSSALMTSMLSI+RHSCGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

A0A6J1CGX5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.3e-3491.01Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        SVFRSFSGSARRAAAHIGS+A+ +SSSPFRMAT+KPLSHRTFRCA EMSFCLESMMPFHSASSSALMTSMLSI+R+SCGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

A0A6J1FS03 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X19.8e-3589.89Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        SVFRSFSGSARRAAA IGSQAK SSS+PFRMAT+KPLSHRTFRCA EMSFCLESMMPFHSASSSALMTSMLS++R  CGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

A0A6J1J7G1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X14.4e-3591.01Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        SVFRSFSGSARRAAA IGSQAK SSS+PFRMAT+KPLSHRTFRCA EMSFCLESMMPFHSASSSALMTSMLS++R SCGWLPEGKDKTR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial8.4e-0743.04Show/hide
Query:  SGSARRAAAHIGSQAKPSSSSP--FRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPE
        + S+R AAA  G  A  + S+P  FR    +       R   E+SFC+ES++P+HSA++SALMTS LSI+  + GWL +
Subjt:  SGSARRAAAHIGSQAKPSSSSP--FRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.4e-1244.57Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        SVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS++R   GW+ +G D+TR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

AT1G28395.2 unknown protein1.4e-1244.57Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        SVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS++R   GW+ +G D+TR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

AT1G28395.3 unknown protein1.4e-1244.57Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR
        SVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS++R   GW+ +G D+TR
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR

AT1G28395.4 unknown protein6.3e-1044.05Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWL
        SVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS++R   GW+
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWL

AT1G28395.5 unknown protein6.3e-1044.05Show/hide
Query:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWL
        SVFRS +  A   A    +  KP  SS    FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLS++R   GW+
Subjt:  SVFRSFSGSARRAAAHIGSQAKPSSSS---PFRMATSKPLSHRTFRCAPEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCACCTGGTGGTCTCCTTGACCTCCCCAACGAAAGTTGGGATGGTCTCGCCATCCAGGGTTGTAAGTATTACGTTATGGATCATATTTTCGTCCTCCTTGATAG
CCACCATAGCTCACCTCCTTCACGGGGATTGAGGGTTGAACTTGAGCACGGGCCATTGTTTTACCAAAGCACAGCCAAGAAGCAAGAGTCTGTTTTCCGGTCATTCTCCG
GTTCGGCACGCCGTGCTGCTGCTCACATCGGCTCTCAAGCTAAGCCGTCATCAAGCTCTCCCTTTCGCATGGCAACTAGCAAGCCCCTCTCTCATCGAACTTTCAGGTGT
GCGCCTGAGATGAGCTTCTGTCTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATCACCCGCCACAGTTGCGGTTGGCT
TCCCGAAGGCAAAGACAAGACTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCACCTGGTGGTCTCCTTGACCTCCCCAACGAAAGTTGGGATGGTCTCGCCATCCAGGGTTGTAAGTATTACGTTATGGATCATATTTTCGTCCTCCTTGATAG
CCACCATAGCTCACCTCCTTCACGGGGATTGAGGGTTGAACTTGAGCACGGGCCATTGTTTTACCAAAGCACAGCCAAGAAGCAAGAGTCTGTTTTCCGGTCATTCTCCG
GTTCGGCACGCCGTGCTGCTGCTCACATCGGCTCTCAAGCTAAGCCGTCATCAAGCTCTCCCTTTCGCATGGCAACTAGCAAGCCCCTCTCTCATCGAACTTTCAGGTGT
GCGCCTGAGATGAGCTTCTGTCTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATCACCCGCCACAGTTGCGGTTGGCT
TCCCGAAGGCAAAGACAAGACTAGATGA
Protein sequenceShow/hide protein sequence
MYSPGGLLDLPNESWDGLAIQGCKYYVMDHIFVLLDSHHSSPPSRGLRVELEHGPLFYQSTAKKQESVFRSFSGSARRAAAHIGSQAKPSSSSPFRMATSKPLSHRTFRC
APEMSFCLESMMPFHSASSSALMTSMLSITRHSCGWLPEGKDKTR