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ClCG02G009770 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G009770
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCytochrome b559 subunit alpha
Genome locationCG_Chr02:15350050..15351120
RNA-Seq ExpressionClCG02G009770
SyntenyClCG02G009770
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS74528.1 hypothetical protein M569_00245, partial [Genlisea aurea]1.3e-2596.83Show/hide
Query:  IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPS
        +FVSVESFSGMFRSSSPLLRKSEP VQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPS
Subjt:  IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPS

GER39682.1 hydrolase [Striga asiatica]7.5e-2997.01Show/hide
Query:  RPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQL
        +P+FVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQL
Subjt:  RPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQL

KAG8369579.1 hypothetical protein BUALT_Bualt14G0028000 [Buddleja alternifolia]8.3e-2892.75Show/hide
Query:  RPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQLGH
        +PIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAE YQLSYI PSQ+ H
Subjt:  RPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQLGH

RYR67196.1 hypothetical protein Ahy_A03g013504 [Arachis hypogaea]1.7e-2575.29Show/hide
Query:  MFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPP-----------------SQLGHPGLEPETSPVK
        MFRSS PLLRKSEPPVQVQ+TIITAWTIRHPTRNRNDPIAR ELYQLSYIPP                 +QLGHPGLEPETSPVK
Subjt:  MFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPP-----------------SQLGHPGLEPETSPVK

TYI86976.1 hypothetical protein E1A91_D04G104800v1 [Gossypium mustelinum]1.2e-4288.89Show/hide
Query:  HRSNCRIGKMECYHIALYRLSSRVGDKRTRTADIRHRPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIP
        +R+NCRIGK+  YHIAL+RLSSRVGDK TRTADIRHRPIFVSVESFSGMFRS SPLLRKSEPPVQVQDTIITAWTIRHPT NRN+PI+RAELYQLSYIP
Subjt:  HRSNCRIGKMECYHIALYRLSSRVGDKRTRTADIRHRPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIP

TrEMBL top hitse value%identityAlignment
A0A5A7Q4B9 Hydrolase3.6e-2997.01Show/hide
Query:  RPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQL
        +P+FVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQL
Subjt:  RPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQL

A0A5D2VCA4 Uncharacterized protein5.8e-4388.89Show/hide
Query:  HRSNCRIGKMECYHIALYRLSSRVGDKRTRTADIRHRPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIP
        +R+NCRIGK+  YHIAL+RLSSRVGDK TRTADIRHRPIFVSVESFSGMFRS SPLLRKSEPPVQVQDTIITAWTIRHPT NRN+PI+RAELYQLSYIP
Subjt:  HRSNCRIGKMECYHIALYRLSSRVGDKRTRTADIRHRPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIP

A0A7N0RFX0 Uncharacterized protein4.3e-3075.26Show/hide
Query:  IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPP-------------------SQLGHPGLEPETSPVK
        IFVSVESF+GMFRSSSPLLRKSEPPVQVQDTIIT WTIRHPTRNRNDPIARAELYQLSYIP                    +QL HPGLEPETSPVK
Subjt:  IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPP-------------------SQLGHPGLEPETSPVK

K3Z2R1 Uncharacterized protein6.4e-2675.58Show/hide
Query:  MFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPP------------------SQLGHPGLEPETSPVK
        MF+SSSPLLRKSEPPVQVQDTIITAWTIR PTRNRNDPIARAELYQLSYIPP                  +QLGHPGLEPETSPVK
Subjt:  MFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPP------------------SQLGHPGLEPETSPVK

S8EEV4 Uncharacterized protein (Fragment)6.4e-2696.83Show/hide
Query:  IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPS
        +FVSVESFSGMFRSSSPLLRKSEP VQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPS
Subjt:  IFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAATCATAGATCGAACTGCCGAATCGGAAAAATGGAGTGCTATCATATAGCTTTGTATCGGCTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCT
GACATCCGCCACAGGCCCATCTTTGTCTCAGTAGAGTCTTTCAGTGGCATGTTTCGGTCCTCTTCCCCATTACTTAGAAAAAGTGAGCCACCGGTTCAGGTACAA
GATACTATCATTACCGCCTGGACAATTAGACATCCAACCCGTAATCGCAACGACCCAATTGCAAGAGCGGAGCTCTACCAACTGAGCTATATCCCCCCGAGCCAA
CTGGGCCATCCTGGACTTGAACCAGAGACCTCGCCCGTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAATCATAGATCGAACTGCCGAATCGGAAAAATGGAGTGCTATCATATAGCTTTGTATCGGCTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCT
GACATCCGCCACAGGCCCATCTTTGTCTCAGTAGAGTCTTTCAGTGGCATGTTTCGGTCCTCTTCCCCATTACTTAGAAAAAGTGAGCCACCGGTTCAGGTACAA
GATACTATCATTACCGCCTGGACAATTAGACATCCAACCCGTAATCGCAACGACCCAATTGCAAGAGCGGAGCTCTACCAACTGAGCTATATCCCCCCGAGCCAA
CTGGGCCATCCTGGACTTGAACCAGAGACCTCGCCCGTGAAGTAA
Protein sequenceShow/hide protein sequence
MINHRSNCRIGKMECYHIALYRLSSRVGDKRTRTADIRHRPIFVSVESFSGMFRSSSPLLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQ
LGHPGLEPETSPVK