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ClCG02G009795 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G009795
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProtein TIC 214
Genome locationCG_Chr02:15451441..15456175
RNA-Seq ExpressionClCG02G009795
SyntenyClCG02G009795
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7012819.1 unnamed protein product [Microthlaspi erraticum]2.9e-5288.14Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEG+R LVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPLGTQTV
        AHNRPKREG FP G + +
Subjt:  AHNRPKREGLFPLGTQTV

CAA7014164.1 unnamed protein product [Microthlaspi erraticum]2.6e-5388.98Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEG+RPLVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPLGTQTV
        AHNRPKREG FP G + +
Subjt:  AHNRPKREGLFPLGTQTV

MBA0613618.1 hypothetical protein [Gossypium davidsonii]1.1e-4381.03Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES
        MEG+RPLVSP VKNWG+ ITSQYA  F + LSSFMV+YSGVLGVEE H SI NLVVKLYCGDDTVGEGT GNRS+GD VGP+AQRIRA GYEPRC GFE 
Subjt:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES

Query:  LLAHNRPKREGLFPLG
        LL HNRPKREG FPLG
Subjt:  LLAHNRPKREGLFPLG

MBA0648806.1 hypothetical protein [Gossypium klotzschianum]9.4e-4380.17Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES
        MEG+RPLVSP VKNWG+ ITSQYA  F + LSSFMV+YSGVLGVEE H SI NLVVKLYCGDDTVGEGT GNRS+ D VGP+AQRIRA GYEPRC GFE 
Subjt:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES

Query:  LLAHNRPKREGLFPLG
        LL HNRPKREG FPLG
Subjt:  LLAHNRPKREGLFPLG

PPS02855.1 hypothetical protein GOBAR_AA17807 [Gossypium barbadense]3.9e-6578.74Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES
        MEG+RPLVSPPVKNWGL ITSQYA  FL+ LSSFMVRYSGVLGVEE HQSIPNLVVKLYC DDTVGEGTPGNRSSGD VGPVAQRIRARGYEPRCRGFES
Subjt:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES

Query:  LLAHNRPKREGLFPLGTQTVEQRIIP-DLHR----------ADRSTTELLRNNGKLGLREFNSRSQPMTNMSSR
        LLAHNRPKREG FPLG +    +  P  LHR          ADRST ELLRNNG+L L EFNSRSQPMTNM+S+
Subjt:  LLAHNRPKREGLFPLGTQTVEQRIIP-DLHR----------ADRSTTELLRNNGKLGLREFNSRSQPMTNMSSR

TrEMBL top hitse value%identityAlignment
A0A2P5XHN3 Uncharacterized protein1.9e-6578.74Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES
        MEG+RPLVSPPVKNWGL ITSQYA  FL+ LSSFMVRYSGVLGVEE HQSIPNLVVKLYC DDTVGEGTPGNRSSGD VGPVAQRIRARGYEPRCRGFES
Subjt:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES

Query:  LLAHNRPKREGLFPLGTQTVEQRIIP-DLHR----------ADRSTTELLRNNGKLGLREFNSRSQPMTNMSSR
        LLAHNRPKREG FPLG +    +  P  LHR          ADRST ELLRNNG+L L EFNSRSQPMTNM+S+
Subjt:  LLAHNRPKREGLFPLGTQTVEQRIIP-DLHR----------ADRSTTELLRNNGKLGLREFNSRSQPMTNMSSR

A0A6D2HAQ3 Uncharacterized protein1.4e-5288.14Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEG+R LVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPLGTQTV
        AHNRPKREG FP G + +
Subjt:  AHNRPKREGLFPLGTQTV

A0A6D2K9K4 Uncharacterized protein1.3e-5388.98Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEG+RPLVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPLGTQTV
        AHNRPKREG FP G + +
Subjt:  AHNRPKREGLFPLGTQTV

A0A6N2NAY5 Uncharacterized protein8.0e-5695.58Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEGQRPLVSP VKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCG+DTVGEG PGNRSSGD VGPVAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPL
        AHNRPKREG FPL
Subjt:  AHNRPKREGLFPL

A0A7J8RIE3 Uncharacterized protein5.3e-4481.03Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES
        MEG+RPLVSP VKNWG+ ITSQYA  F + LSSFMV+YSGVLGVEE H SI NLVVKLYCGDDTVGEGT GNRS+GD VGP+AQRIRA GYEPRC GFE 
Subjt:  MEGQRPLVSPPVKNWGLTITSQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES

Query:  LLAHNRPKREGLFPLG
        LL HNRPKREG FPLG
Subjt:  LLAHNRPKREGLFPLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCACTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGGTACCCCCGGGAACAGATCCAGTG
GAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTT
TTCCCTCTGGGGACCCAGACTGTGGAACAAAGGATTATCCCGGACCTACACCGAGCCGACCGCTCTACCACTGAGCTACTGAGGAACAACGGTAAATTAGGTCTCAGAGA
ATTCAATTCCCGTTCTCAACCCATGACCAATATGAGCTCGAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGAAAGAAGGAACCAAGAAGAAAGTATCAGCA
ACAACAGGTTTTATTACGGGATAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGATCCTTTGATTATGTCTCGACGAAAATCCGATTGTTGGGAATA
CCGTATCAAAGCAACTTCAGGAGGCTCAATGCTGAAGGACATGAGAAGGCATATGAGTTTCCCCGGGACCTAGTACTAAGGGACTCAAAGAAGGTACTTGGGCAACCCGT
GATATTCCTATGTGCACATAGAGGTTATGACGTTGGGTGTGTTGAATTTTGCTCCGCCTCAACTAAGGTTGTTTTCGACGTTGGGTGTGTTGAGTGTTGCTCCACCCCAA
CTAAGGTTATGTTCGACGTTGAGTGCATTGAGTTTTGCTCCGCCTCAACTAAGCGATGGATTGAAAAACTATGCGATGAGCAGCGGCTAGGCGTTGGGAGTTTGCTATGT
GCTATGAAGGTTCATTCGGCTGATCAAGAAGTCCCCGAAAATGGTATAGCCTGTGCGGGAGAGGCCGTTAAGCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCACTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGGTACCCCCGGGAACAGATCCAGTG
GAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTT
TTCCCTCTGGGGACCCAGACTGTGGAACAAAGGATTATCCCGGACCTACACCGAGCCGACCGCTCTACCACTGAGCTACTGAGGAACAACGGTAAATTAGGTCTCAGAGA
ATTCAATTCCCGTTCTCAACCCATGACCAATATGAGCTCGAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGAAAGAAGGAACCAAGAAGAAAGTATCAGCA
ACAACAGGTTTTATTACGGGATAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGATCCTTTGATTATGTCTCGACGAAAATCCGATTGTTGGGAATA
CCGTATCAAAGCAACTTCAGGAGGCTCAATGCTGAAGGACATGAGAAGGCATATGAGTTTCCCCGGGACCTAGTACTAAGGGACTCAAAGAAGGTACTTGGGCAACCCGT
GATATTCCTATGTGCACATAGAGGTTATGACGTTGGGTGTGTTGAATTTTGCTCCGCCTCAACTAAGGTTGTTTTCGACGTTGGGTGTGTTGAGTGTTGCTCCACCCCAA
CTAAGGTTATGTTCGACGTTGAGTGCATTGAGTTTTGCTCCGCCTCAACTAAGCGATGGATTGAAAAACTATGCGATGAGCAGCGGCTAGGCGTTGGGAGTTTGCTATGT
GCTATGAAGGTTCATTCGGCTGATCAAGAAGTCCCCGAAAATGGTATAGCCTGTGCGGGAGAGGCCGTTAAGCGTTGA
Protein sequenceShow/hide protein sequence
MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGL
FPLGTQTVEQRIIPDLHRADRSTTELLRNNGKLGLREFNSRSQPMTNMSSRALLSLPSPSSGYERRNQEESISNNRFYYGIAHDVHIDLLCASASRSFDYVSTKIRLLGI
PYQSNFRRLNAEGHEKAYEFPRDLVLRDSKKVLGQPVIFLCAHRGYDVGCVEFCSASTKVVFDVGCVECCSTPTKVMFDVECIEFCSASTKRWIEKLCDEQRLGVGSLLC
AMKVHSADQEVPENGIACAGEAVKR