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ClCG02G010210 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G010210
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr02:17587930..17588226
RNA-Seq ExpressionClCG02G010210
SyntenyClCG02G010210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649707.1 hypothetical protein Csa_012825 [Cucumis sativus]9.9e-1962.14Show/hide
Query:  MSSPSILMATSRVLLNLVPAPETL-EAIVPIFRESIAEVPE--SSISLPPSSDGFNTFDPNRMSARAPTSDSTFNSCKPKGPIRWSAPNPKHN-DFLE-S
        MSSPS ++AT+R +L+L   P TL E+ +  FRESIAEVPE  SSISLPP+SD F +FDPN M ARAP   S  + CKPKGPI WSAPNPKHN  ++  S
Subjt:  MSSPSILMATSRVLLNLVPAPETL-EAIVPIFRESIAEVPE--SSISLPPSSDGFNTFDPNRMSARAPTSDSTFNSCKPKGPIRWSAPNPKHN-DFLE-S

Query:  TIC
        TIC
Subjt:  TIC

KAE8649709.1 hypothetical protein Csa_012565, partial [Cucumis sativus]1.3e-1865.59Show/hide
Query:  MSSPSILMATSRVLLNLVPAPETL-EAIVPIFRESIAEVPE--SSISLPPSSDGFNTFDPNRMSARAPTSDSTFNSCKPKGPIRWSAPNPKHN
        MSSPS +MAT+R +L+L   P TL E+ +  FRESIAEVPE  SSISLPP+SD F +FDPN M ARAP   S  + CKPKGPI WSAPNPKHN
Subjt:  MSSPSILMATSRVLLNLVPAPETL-EAIVPIFRESIAEVPE--SSISLPPSSDGFNTFDPNRMSARAPTSDSTFNSCKPKGPIRWSAPNPKHN

KAG6595583.1 hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0439.13Show/hide
Query:  MSSPSILMATSRVLLNLVPAPETLEAIVPIFRESIAEVPESSISLPPSSDGFNTFD-PNRMSARAPTSDSTFNSCKPKGPIRWSAPNPKHND
        +SSPS ++ATSR +L L    +T E+            P+  +  PP+S+ F+T   PN   A  P  +S   SCKPKGP+RWS+P+P  N+
Subjt:  MSSPSILMATSRVLLNLVPAPETLEAIVPIFRESIAEVPESSISLPPSSDGFNTFD-PNRMSARAPTSDSTFNSCKPKGPIRWSAPNPKHND

TYK09256.1 hypothetical protein E5676_scaffold475G002500 [Cucumis melo var. makuwa]5.3e-0438.6Show/hide
Query:  MSSPSILMATSRVLLNLVPAP------ETL------EAIVPIFRES--IAEVPESSISLPPSSDGFNTFD-PNRMSARAPTSDSTFNSCKPKGPIRWSAP
        ++S S  MATSR +L + P P       TL       A  P   E+  +A    SS S+PPS   F  F+ P+ +SA  PT D    SCKPKG +R+SAP
Subjt:  MSSPSILMATSRVLLNLVPAP------ETL------EAIVPIFRES--IAEVPESSISLPPSSDGFNTFD-PNRMSARAPTSDSTFNSCKPKGPIRWSAP

Query:  NPKHN-DFLESTIC
        + + N + L S +C
Subjt:  NPKHN-DFLESTIC

TrEMBL top hitse value%identityAlignment
A0A5D3CFX3 Uncharacterized protein2.5e-0438.6Show/hide
Query:  MSSPSILMATSRVLLNLVPAP------ETL------EAIVPIFRES--IAEVPESSISLPPSSDGFNTFD-PNRMSARAPTSDSTFNSCKPKGPIRWSAP
        ++S S  MATSR +L + P P       TL       A  P   E+  +A    SS S+PPS   F  F+ P+ +SA  PT D    SCKPKG +R+SAP
Subjt:  MSSPSILMATSRVLLNLVPAP------ETL------EAIVPIFRES--IAEVPESSISLPPSSDGFNTFD-PNRMSARAPTSDSTFNSCKPKGPIRWSAP

Query:  NPKHN-DFLESTIC
        + + N + L S +C
Subjt:  NPKHN-DFLESTIC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCCATCCATACTCATGGCAACTTCTAGAGTCTTGCTCAATTTAGTACCTGCTCCAGAAACTTTGGAAGCTATAGTTCCTATTTTTAGAGAATCTATTGCTGA
AGTACCTGAATCATCAATTTCCCTTCCTCCAAGCTCTGATGGGTTTAACACTTTTGATCCTAATAGAATGAGTGCAAGGGCACCAACATCTGACTCAACCTTCAACAGTT
GCAAGCCTAAAGGACCAATCAGATGGTCTGCTCCAAATCCTAAACACAATGACTTCTTGGAATCAACTATATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCCATCCATACTCATGGCAACTTCTAGAGTCTTGCTCAATTTAGTACCTGCTCCAGAAACTTTGGAAGCTATAGTTCCTATTTTTAGAGAATCTATTGCTGA
AGTACCTGAATCATCAATTTCCCTTCCTCCAAGCTCTGATGGGTTTAACACTTTTGATCCTAATAGAATGAGTGCAAGGGCACCAACATCTGACTCAACCTTCAACAGTT
GCAAGCCTAAAGGACCAATCAGATGGTCTGCTCCAAATCCTAAACACAATGACTTCTTGGAATCAACTATATGTTAA
Protein sequenceShow/hide protein sequence
MSSPSILMATSRVLLNLVPAPETLEAIVPIFRESIAEVPESSISLPPSSDGFNTFDPNRMSARAPTSDSTFNSCKPKGPIRWSAPNPKHNDFLESTIC