| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025139.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 1.4e-59 | 41.46 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE F +LK ++L+ F+++R+G+ + YRN FDKL+AP+ L V+EETFMNGL PW+K+EVE E
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIK-----------------------------NTIVGTAKDEPKTQGIPTTW---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K I T K I +W TITLR VAT N ++GP KRL+DAEF+A+REKGLCFRC EK
Subjt: GLTNMIK-----------------------------NTIVGTAKDEPKTQGIPTTW---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEE------DMTEFETV------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLIE--------------
Y A H+CK ++H+ELR+L+V +G EE +++EEE M + E +EL LNSVVGLTNPGTMKVKG + +E VV+LI+
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEE------DMTEFETV------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLIE--------------
Query: ---LSLVETRNYGIIMGIGKAVKGKGVYVADEICRPIPCQSEHRNADANFFRVSTSEC-HDAPMQHRNT
L+L +T NYG+I+G G VKGKGV CR + QS + ADA+F +C + H+NT
Subjt: ---LSLVETRNYGIIMGIGKAVKGKGVYVADEICRPIPCQSEHRNADANFFRVSTSEC-HDAPMQHRNT
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| KAA0049630.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 7.6e-58 | 44.34 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE FK +LK ++L+ F+S R G+ + YRN FDK +AP+ L V+EETFMNGL PW+K+EVE WE V
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K + + +A D Q T W TITLR VAT N ++GP KRLTDAEF+A+REKGLCFRC EK
Subjt: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Y A H+CK +D +ELR+LLV + EE +++EEE TE + +EL +NSVVGLTNPGTMKVKG + KE VVVLI
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Query: --ELSLVETRNYGIIMGIGKAVKGKGV
+L + ET NYG+I+G G ++KGKGV
Subjt: --ELSLVETRNYGIIMGIGKAVKGKGV
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| KAA0049776.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 7.6e-58 | 44.34 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE FK +LK ++L+ F+S R G+ + YRN FDK +AP+ L V+EETFMNGL PW+K+EVE WE V
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K + + +A D Q T W TITLR VAT N ++GP KRLTDAEF+A+REKGLCFRC EK
Subjt: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Y A H+CK +D +ELR+LLV + EE +++EEE TE + +EL +NSVVGLTNPGTMKVKG + KE VVVLI
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Query: --ELSLVETRNYGIIMGIGKAVKGKGV
+L + ET NYG+I+G G ++KGKGV
Subjt: --ELSLVETRNYGIIMGIGKAVKGKGV
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| TYK15990.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 7.6e-58 | 44.34 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE FK +LK ++L+ F+S R G+ + YRN FDK +AP+ L V+EETFMNGL PW+K+EVE WE V
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K + + +A D Q T W TITLR VAT N ++GP KRLTDAEF+A+REKGLCFRC EK
Subjt: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Y A H+CK +D +ELR+LLV + EE +++EEE TE + +EL +NSVVGLTNPGTMKVKG + KE VVVLI
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Query: --ELSLVETRNYGIIMGIGKAVKGKGV
+L + ET NYG+I+G G ++KGKGV
Subjt: --ELSLVETRNYGIIMGIGKAVKGKGV
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| TYK16929.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.4e-58 | 44.34 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE FK ++LK ++L+ F+S R G+ + YRN FDK +AP+ L V+EETFMNGL PW+K+EVE WELV
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K + + +A D Q T W TITLR VAT N ++GP KRLTDAEF+A+RE GLCFRC EK
Subjt: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Y A H+CK +D +ELR+LLV + EE +++EEE TE + +EL +NSVVGLTNPGTMKVKG + KE VVVLI
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Query: --ELSLVETRNYGIIMGIGKAVKGKGV
+L + ET NYG+I+G G ++KGKGV
Subjt: --ELSLVETRNYGIIMGIGKAVKGKGV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U2S1 Ty3/gypsy retrotransposon protein | 3.7e-58 | 44.34 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE FK +LK ++L+ F+S R G+ + YRN FDK +AP+ L V+EETFMNGL PW+K+EVE WE V
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K + + +A D Q T W TITLR VAT N ++GP KRLTDAEF+A+REKGLCFRC EK
Subjt: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Y A H+CK +D +ELR+LLV + EE +++EEE TE + +EL +NSVVGLTNPGTMKVKG + KE VVVLI
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Query: --ELSLVETRNYGIIMGIGKAVKGKGV
+L + ET NYG+I+G G ++KGKGV
Subjt: --ELSLVETRNYGIIMGIGKAVKGKGV
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| A0A5A7U6J3 Ty3/gypsy retrotransposon protein | 3.7e-58 | 44.34 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE FK +LK ++L+ F+S R G+ + YRN FDK +AP+ L V+EETFMNGL PW+K+EVE WE V
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K + + +A D Q T W TITLR VAT N ++GP KRLTDAEF+A+REKGLCFRC EK
Subjt: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Y A H+CK +D +ELR+LLV + EE +++EEE TE + +EL +NSVVGLTNPGTMKVKG + KE VVVLI
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Query: --ELSLVETRNYGIIMGIGKAVKGKGV
+L + ET NYG+I+G G ++KGKGV
Subjt: --ELSLVETRNYGIIMGIGKAVKGKGV
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| A0A5D3CXB1 Ty3/gypsy retrotransposon protein | 3.7e-58 | 44.34 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE FK +LK ++L+ F+S R G+ + YRN FDK +AP+ L V+EETFMNGL PW+K+EVE WE V
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K + + +A D Q T W TITLR VAT N ++GP KRLTDAEF+A+REKGLCFRC EK
Subjt: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Y A H+CK +D +ELR+LLV + EE +++EEE TE + +EL +NSVVGLTNPGTMKVKG + KE VVVLI
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Query: --ELSLVETRNYGIIMGIGKAVKGKGV
+L + ET NYG+I+G G ++KGKGV
Subjt: --ELSLVETRNYGIIMGIGKAVKGKGV
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| A0A5D3D2W5 Ty3-gypsy retrotransposon protein | 1.7e-58 | 44.34 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE FK ++LK ++L+ F+S R G+ + YRN FDK +AP+ L V+EETFMNGL PW+K+EVE WELV
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K + + +A D Q T W TITLR VAT N ++GP KRLTDAEF+A+RE GLCFRC EK
Subjt: GLTNMIKNTI-------------VGTAKDEPKTQGIPTT----------------W---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Y A H+CK +D +ELR+LLV + EE +++EEE TE + +EL +NSVVGLTNPGTMKVKG + KE VVVLI
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEEDM---TEFETV---------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLI---------------
Query: --ELSLVETRNYGIIMGIGKAVKGKGV
+L + ET NYG+I+G G ++KGKGV
Subjt: --ELSLVETRNYGIIMGIGKAVKGKGV
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| A0A5D3DIM6 Transposon Ty3-G Gag-Pol polyprotein | 6.7e-60 | 41.46 | Show/hide |
Query: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
+I+F LDW+RS+EERE F +LK ++L+ F+++R+G+ + YRN FDKL+AP+ L V+EETFMNGL PW+K+EVE E
Subjt: MINFGRATLDWFRSKEEREPFKDRKELKDRLLICFKSSRKGS--------------DAYRNLFDKLVAPLPQLSNQVIEETFMNGLIPWVKAEVECWELV
Query: GLTNMIK-----------------------------NTIVGTAKDEPKTQGIPTTW---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
GL M+K I T K I +W TITLR VAT N ++GP KRL+DAEF+A+REKGLCFRC EK
Subjt: GLTNMIK-----------------------------NTIVGTAKDEPKTQGIPTTW---TITLRGVATWVNHQKGPIKRLTDAEFRAKREKGLCFRCNEK
Query: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEE------DMTEFETV------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLIE--------------
Y A H+CK ++H+ELR+L+V +G EE +++EEE M + E +EL LNSVVGLTNPGTMKVKG + +E VV+LI+
Subjt: YSASHQCKVRDHRELRILLV-QGEEEWDVLEEE------DMTEFETV------VELFLNSVVGLTNPGTMKVKGTINKEPVVVLIE--------------
Query: ---LSLVETRNYGIIMGIGKAVKGKGVYVADEICRPIPCQSEHRNADANFFRVSTSEC-HDAPMQHRNT
L+L +T NYG+I+G G VKGKGV CR + QS + ADA+F +C + H+NT
Subjt: ---LSLVETRNYGIIMGIGKAVKGKGVYVADEICRPIPCQSEHRNADANFFRVSTSEC-HDAPMQHRNT
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