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ClCG02G010930 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G010930
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNucleolar protein 8
Genome locationCG_Chr02:22477759..22480919
RNA-Seq ExpressionClCG02G010930
SyntenyClCG02G010930
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588264.1 Protein REPRESSOR OF SILENCING 3, partial [Cucurbita argyrosperma subsp. sororia]2.9e-0952.94Show/hide
Query:  LELQAL--GRRRRKVMEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK
        L L+AL  GRRRRK ME+ E AS KMRI+VG LG AMT+D+L+KV QSVGGV+E V F+++    +  + A ++F  S Q  V K
Subjt:  LELQAL--GRRRRKVMEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK

KAG7022183.1 Nucleolar protein 8 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-0651.43Show/hide
Query:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK
        ME+ ESAS KMRI+VG LG AMT+D+L+KV QSVGGV+E V F+++    +  + A ++F  S Q  V K
Subjt:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK

XP_022933918.1 uncharacterized protein LOC111441186 [Cucurbita moschata]6.8e-0650Show/hide
Query:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK
        ME+ ESAS K+RI+VG LG AMT+D+L+KV QSVGGV+E V F+++    +  + A ++F  S Q  V K
Subjt:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK

XP_023006551.1 uncharacterized protein LOC111499238 [Cucurbita maxima]1.8e-0650Show/hide
Query:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK
        ME+EESAS KMRI+VG LG +MT+D+L+KV QSVGGV+E V F+++    +  + A ++F  S Q  + K
Subjt:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK

XP_038880727.1 uncharacterized protein LOC120072327 [Benincasa hispida]3.6e-0771.11Show/hide
Query:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQ
        MEKEESASK+MRI+VG LG AMT+D+L+KV QSVGGV+E V F++
Subjt:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXQ1 RRM domain-containing protein2.8e-0550.77Show/hide
Query:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQ
        MEK +SAS+ MRI+VG LG AMT+D+L+KV  SVGGV+E V FV+     +  + A ++F  S Q
Subjt:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQ

A0A1S3B9A4 uncharacterized protein LOC1034872001.6e-0550.77Show/hide
Query:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQ
        ME+ +SAS+KMRI+VG LG AMT+D+L+KV  SVGGV+E V FV+     +  + A ++F  S Q
Subjt:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQ

A0A5D3CSI8 Nucleolar protein 81.6e-0550.77Show/hide
Query:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQ
        ME+ +SAS+KMRI+VG LG AMT+D+L+KV  SVGGV+E V FV+     +  + A ++F  S Q
Subjt:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQ

A0A6J1F672 uncharacterized protein LOC1114411863.3e-0650Show/hide
Query:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK
        ME+ ESAS K+RI+VG LG AMT+D+L+KV QSVGGV+E V F+++    +  + A ++F  S Q  V K
Subjt:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK

A0A6J1KY23 uncharacterized protein LOC1114992388.6e-0750Show/hide
Query:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK
        ME+EESAS KMRI+VG LG +MT+D+L+KV QSVGGV+E V F+++    +  + A ++F  S Q  + K
Subjt:  MEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTTCTCGACCTCTGTGGAAAGTCCTAAGTGATCCCAAGTCCAACTCCCCTTCCAATAACGACAAAAAGAAGAGACCACAAAGATCCAAGAAGAAAATCTATTG
TTTCAGAAGGAACGAGGATGAGCATGCAACACTTAGCCAACCAAATTTCCCAATTGGCCACCTTCGTGAACAAATTGGACAGCCAAAATGTGCTTTGACAACGGTAAGTT
CCCCTGAATTTTCAAGGCTTATGACTGAAGAAGAATTTAATGAAGTATTTGAGTTCATTGAAAAGTCTAACAAGAAAGATGTAAGACCCCAACACCGAGGAGCTCTGAAC
AGGTTTGTGACTATTGGAAACCTTGAACTTCAAGCTCTAGGAAGAAGAAGAAGAAAAGTTATGGAAAAAGAAGAAAGTGCCTCCAAAAAGATGAGAATTTTTGTTGGAGC
ACTGGGTACCGCCATGACTAAAGACAATCTCAAAAAGGTTTCTCAGAGCGTCGGTGGTGTGATGGAGGTCGTTCATTTCGTTCAAAACCTTGATGAAATTCGAATAGAAA
CTGAAGCTGGTCTGGAATTCATGCAATCTGAACAGATTGTGGTGTTCAAAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTTCTCGACCTCTGTGGAAAGTCCTAAGTGATCCCAAGTCCAACTCCCCTTCCAATAACGACAAAAAGAAGAGACCACAAAGATCCAAGAAGAAAATCTATTG
TTTCAGAAGGAACGAGGATGAGCATGCAACACTTAGCCAACCAAATTTCCCAATTGGCCACCTTCGTGAACAAATTGGACAGCCAAAATGTGCTTTGACAACGGTAAGTT
CCCCTGAATTTTCAAGGCTTATGACTGAAGAAGAATTTAATGAAGTATTTGAGTTCATTGAAAAGTCTAACAAGAAAGATGTAAGACCCCAACACCGAGGAGCTCTGAAC
AGGTTTGTGACTATTGGAAACCTTGAACTTCAAGCTCTAGGAAGAAGAAGAAGAAAAGTTATGGAAAAAGAAGAAAGTGCCTCCAAAAAGATGAGAATTTTTGTTGGAGC
ACTGGGTACCGCCATGACTAAAGACAATCTCAAAAAGGTTTCTCAGAGCGTCGGTGGTGTGATGGAGGTCGTTCATTTCGTTCAAAACCTTGATGAAATTCGAATAGAAA
CTGAAGCTGGTCTGGAATTCATGCAATCTGAACAGATTGTGGTGTTCAAAGGATAA
Protein sequenceShow/hide protein sequence
MEVSRPLWKVLSDPKSNSPSNNDKKKRPQRSKKKIYCFRRNEDEHATLSQPNFPIGHLREQIGQPKCALTTVSSPEFSRLMTEEEFNEVFEFIEKSNKKDVRPQHRGALN
RFVTIGNLELQALGRRRRKVMEKEESASKKMRIFVGALGTAMTKDNLKKVSQSVGGVMEVVHFVQNLDEIRIETEAGLEFMQSEQIVVFKG