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ClCG02G011605 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G011605
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionBeta-galactosidase
Genome locationCG_Chr02:24498236..24498622
RNA-Seq ExpressionClCG02G011605
SyntenyClCG02G011605
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0043564 - Ku70:Ku80 complex (cellular component)
GO:0003678 - DNA helicase activity (molecular function)
GO:0003684 - damaged DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0042162 - telomeric DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]6.6e-3970.8Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        M LE RY+FG+LT EI++  P D+ E +WKG+DSL+RS+LINSMEPQIGKPLLY   A D+WD  Q LY KRQNAS LYTLRK V  CKQGT+DVT+YFN
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCR
        KLSL+WQEMDLCR
Subjt:  KLSLIWQEMDLCR

XP_038888140.1 uncharacterized protein LOC120078031 [Benincasa hispida]9.2e-4170.59Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        MALE R+KFGYLT EI + RP D Q+ +WKG+DSLL S+LI+ MEPQIGKPL+Y A A DIWDAVQKLY KR+NAS LYTL+K V ECKQGTMD+T YFN
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCRPVEVSC
        K S IWQEMDLCR +   C
Subjt:  KLSLIWQEMDLCRPVEVSC

XP_038889334.1 uncharacterized protein LOC120079245 [Benincasa hispida]3.9e-3973.04Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        MALE R+K GYLT EI K  P D QE IWKG+DSLLRS+LINSMEPQIG+PLLY AIA  IWDAVQ+LY KR NAS LYTL K   ECKQGTMDVT YFN
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCRPV
        K+ L+WQEMDLC+ +
Subjt:  KLSLIWQEMDLCRPV

XP_038899041.1 uncharacterized protein LOC120086450 [Benincasa hispida]1.1e-4170.83Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        M LE R+KFGYLT EI K  P D QECIWKG+DSLLR +LINSME +IG+PLLY A   DIWDAVQ+LY KRQNAS LYTLRK   +CKQGTMD+TSYFN
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCRPVEVSCI
        K+SL+WQEMDLCR +   C+
Subjt:  KLSLIWQEMDLCRPVEVSCI

XP_038904274.1 uncharacterized protein LOC120090627 [Benincasa hispida]6.0e-4070.59Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        MALE R+KFGYLT EI +L P D QEC+WK +DSLLRS+LI+SME QIGKPLLY+A A DI DAV++LY + QNAS LYTLRK V ECKQG+MDVTSYF+
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCRPVEVSC
        K+SL+WQEMDLCR +  +C
Subjt:  KLSLIWQEMDLCRPVEVSC

TrEMBL top hitse value%identityAlignment
A0A5A7SM64 Beta-galactosidase3.2e-3970.8Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        M LE RY+FG+LT EI++  P D+ E +WKG+DSL+RS+LINSMEPQIGKPLLY   A D+WD  Q LY KRQNAS LYTLRK V  CKQGT+DVT+YFN
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCR
        KLSL+WQEMDLCR
Subjt:  KLSLIWQEMDLCR

A0A5A7UGB2 Beta-galactosidase3.2e-3970.8Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        M LE RY+FG+LT EI++  P D+ E +WKG+DSL+RS+LINSMEPQIGKPLLY   A D+WD  Q LY KRQNAS LYTLRK V  CKQGT+DVT+YFN
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCR
        KLSL+WQEMDLCR
Subjt:  KLSLIWQEMDLCR

A0A5A7V0Y9 Beta-galactosidase3.2e-3970.8Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        M LE RY+FG+LT EI++  P D+ E +WKG+DSL+RS+LINSMEPQIGKPLLY   A D+WD  Q LY KRQNAS LYTLRK V  CKQGT+DVT+YFN
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCR
        KLSL+WQEMDLCR
Subjt:  KLSLIWQEMDLCR

A0A5D3BJK7 Beta-galactosidase3.2e-3970.8Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        M LE RY+FG+LT EI++  P D+ E +WKG+DSL+RS+LINSMEPQIGKPLLY   A D+WD  Q LY KRQNAS LYTLRK V  CKQGT+DVT+YFN
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCR
        KLSL+WQEMDLCR
Subjt:  KLSLIWQEMDLCR

A0A5D3C4T4 Beta-galactosidase3.2e-3970.8Show/hide
Query:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN
        M LE RY+FG+LT EI++  P D+ E +WKG+DSL+RS+LINSMEPQIGKPLLY   A D+WD  Q LY KRQNAS LYTLRK V  CKQGT+DVT+YFN
Subjt:  MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFN

Query:  KLSLIWQEMDLCR
        KLSL+WQEMDLCR
Subjt:  KLSLIWQEMDLCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTGAAAGGCGTTACAAGTTCGGGTATCTAACTTGTGAGATATTGAAACTCAGACCAAGGGATTCTCAAGAATGCATTTGGAAAGGAAAGGACTCCCTACTTCG
ATCACTGCTGATTAATAGTATGGAACCTCAGATAGGGAAACCACTGTTGTATACTGCAATTGCTCTAGACATCTGGGATGCAGTTCAGAAATTATACTTTAAGAGACAGA
ATGCATCTTGTCTTTACACCTTGCGAAAACATGTTCCTGAGTGCAAACAAGGAACAATGGATGTTACTTCATATTTTAACAAATTGTCCCTTATTTGGCAGGAAATGGAT
CTGTGTCGCCCTGTGGAGGTGTCCTGTATTCTAAAATTGAGGAAGTTGACCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTGAAAGGCGTTACAAGTTCGGGTATCTAACTTGTGAGATATTGAAACTCAGACCAAGGGATTCTCAAGAATGCATTTGGAAAGGAAAGGACTCCCTACTTCG
ATCACTGCTGATTAATAGTATGGAACCTCAGATAGGGAAACCACTGTTGTATACTGCAATTGCTCTAGACATCTGGGATGCAGTTCAGAAATTATACTTTAAGAGACAGA
ATGCATCTTGTCTTTACACCTTGCGAAAACATGTTCCTGAGTGCAAACAAGGAACAATGGATGTTACTTCATATTTTAACAAATTGTCCCTTATTTGGCAGGAAATGGAT
CTGTGTCGCCCTGTGGAGGTGTCCTGTATTCTAAAATTGAGGAAGTTGACCGTGTGA
Protein sequenceShow/hide protein sequence
MALERRYKFGYLTCEILKLRPRDSQECIWKGKDSLLRSLLINSMEPQIGKPLLYTAIALDIWDAVQKLYFKRQNASCLYTLRKHVPECKQGTMDVTSYFNKLSLIWQEMD
LCRPVEVSCILKLRKLTV