CuGenDBv2

Gene ID	ClCG02G011640
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein Ycf2-like
Genome location	CG_Chr02:24590581..24590946
RNA-Seq Expression	ClCG02G011640
Synteny	ClCG02G011640
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0032264.1 hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa]

6.7e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK +LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
         +KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

KAA0036929.1 hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa]

8.7e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK++LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
         +KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

KAA0067880.1 hypothetical protein E6C27_scaffold138G00340 [Cucumis melo var. makuwa]

6.7e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK++LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
        ++KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

TYJ96590.1 hypothetical protein E5676_scaffold1278G00080 [Cucumis melo var. makuwa]

5.1e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK++LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
         +KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

TYK15460.1 hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa]

5.1e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK++LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
         +KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM53 Uncharacterized protein

3.2e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK +LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
         +KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

A0A5A7T6C2 Uncharacterized protein

4.2e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK++LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
         +KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

A0A5A7VKZ2 Uncharacterized protein

3.2e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK++LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
        ++KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

A0A5D3B9P7 Uncharacterized protein

2.5e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK++LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
         +KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

A0A5D3CVR6 Uncharacterized protein

2.5e-25

58.82

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Query:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP
        FTVI  TPT DEL S N+Q+FLN+ PN+V KE SEE EDE+ +   E+E +N +  K+LR+EIQEVK++LE+LK  VENG NEV+ LLNNI+  I ER+P
Subjt:  FTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIP

Query:  MQKQSQDLFHENNAPIISL
         +KQSQ  +HEN+AP +SL
Subjt:  MQKQSQDLFHENNAPIISL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCAATTTACAGTTATCCGTATCACTCCAACTGATGATGAACTAAACTCTGTAAATTATCAATACTTCCTTAATGAACCACCAAATCAAGTTGTGAAAGAGGCTAGTGA
GGAAAAAGAAGATGAAAGTGTTGAAGCTCCAAAAGAAGATGAAAATTTAAACAAACAGGAAAACAAAACATTAAGAGAAGAAATTCAAGAAGTGAAAGAGGAGTTGGAGA
ACTTGAAGAAAAATGTGGAAAATGGAGTAAATGAAGTCATGAGATTGTTGAACAACATCATGAATGCAATTACTGAAAGAATACCAATGCAAAAACAATCTCAAGACTTA
TTCCATGAAAATAATGCTCCCATAATCAGTCTATAG

mRNA sequence

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Protein sequence

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MQFTVIRITPTDDELNSVNYQYFLNEPPNQVVKEASEEKEDESVEAPKEDENLNKQENKTLREEIQEVKEELENLKKNVENGVNEVMRLLNNIMNAITERIPMQKQSQDL
FHENNAPIISL

ClCG02G011640 (gene) of Watermelon (Charleston Gray) v2.5 genome