; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G011680 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G011680
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr02:24641536..24642286
RNA-Seq ExpressionClCG02G011680
SyntenyClCG02G011680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EAW51470.1 hCG2042692, partial [Homo sapiens]3.8e-0531.4Show/hide
Query:  KNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN-------VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALPP
        +N G    H++N G +  HL+N G  + H +N G  + +L+N       ++N G +  HL+N G   P L+N G ++   +N G    H   N G   P 
Subjt:  KNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN-------VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALPP

Query:  LQNVSAASLHLKNVGVALPPL
        L+N    + HL+N G   P L
Subjt:  LQNVSAASLHLKNVGVALPPL

GCB85941.1 hypothetical protein [Scyliorhinus torazame]6.9e-0731.93Show/hide
Query:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQNV-------DNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALP
        SK+ GA++LH ++ G  + H ++ GA   H  + GA+ L  ++        ++ GA +LH ++ GA + P ++ GA+  H ++ GA +LH  ++ GAA  
Subjt:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQNV-------DNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALP

Query:  PLQNVSAASLHLKNVGVAL
          ++  AA LH +N G A+
Subjt:  PLQNVSAASLHLKNVGVAL

GCB86193.1 hypothetical protein [Scyliorhinus torazame]1.7e-0529.41Show/hide
Query:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN-------VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALP
        S++ GA++LH ++ GV +L  ++ GA   H ++ GA+ L+ ++        ++ G  +LH  + GA   P ++ G    H ++ GA +LH  ++ GAA+ 
Subjt:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN-------VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALP

Query:  PLQNVSAASLHLKNVGVAL
          ++  AA LH ++ G A+
Subjt:  PLQNVSAASLHLKNVGVAL

TNN54915.1 putative PPE family protein PPE16 [Liparis tanakae]4.9e-0536.15Show/hide
Query:  MSMQLHSIFRMLVQLRAISKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN--VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGAT
        MS+Q  S+  M +Q   + +N+    + LQN G+  + LQN G  +   QNV   ++ LQN  + N G   + LQN+G     LQNVG  +   QNVG  
Subjt:  MSMQLHSIFRMLVQLRAISKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN--VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGAT

Query:  LLHFHKNVGAALPPLQNVSAASLHLKNVGV
         +   +NVG     LQNVS  ++ L+ VG+
Subjt:  LLHFHKNVGAALPPLQNVSAASLHLKNVGV

XP_032871519.1 histone-lysine N-methyltransferase 2D isoform X8 [Amblyraja radiata]3.2e-0429.66Show/hide
Query:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQNV-----DNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALPPL
        S+++GA + H Q++G ++ H Q+ G   QH Q++G    + Q++      + GA++ H Q++G  +   Q++G    H Q+ GA + H  +++GA +   
Subjt:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQNV-----DNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALPPL

Query:  QNVSAASLHLKNVGVALP
        Q  SA   HL+  G  +P
Subjt:  QNVSAASLHLKNVGVALP

TrEMBL top hitse value%identityAlignment
A0A401QKK1 Uncharacterized protein (Fragment)3.3e-0731.93Show/hide
Query:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQNV-------DNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALP
        SK+ GA++LH ++ G  + H ++ GA   H  + GA+ L  ++        ++ GA +LH ++ GA + P ++ GA+  H ++ GA +LH  ++ GAA  
Subjt:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQNV-------DNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALP

Query:  PLQNVSAASLHLKNVGVAL
          ++  AA LH +N G A+
Subjt:  PLQNVSAASLHLKNVGVAL

A0A401QLK3 Uncharacterized protein (Fragment)8.2e-0629.41Show/hide
Query:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN-------VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALP
        S++ GA++LH ++ GV +L  ++ GA   H ++ GA+ L+ ++        ++ G  +LH  + GA   P ++ G    H ++ GA +LH  ++ GAA+ 
Subjt:  SKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN-------VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALP

Query:  PLQNVSAASLHLKNVGVAL
          ++  AA LH ++ G A+
Subjt:  PLQNVSAASLHLKNVGVAL

A0A4Z2GP35 Putative PPE family protein PPE162.4e-0536.15Show/hide
Query:  MSMQLHSIFRMLVQLRAISKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN--VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGAT
        MS+Q  S+  M +Q   + +N+    + LQN G+  + LQN G  +   QNV   ++ LQN  + N G   + LQN+G     LQNVG  +   QNVG  
Subjt:  MSMQLHSIFRMLVQLRAISKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQN--VDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGAT

Query:  LLHFHKNVGAALPPLQNVSAASLHLKNVGV
         +   +NVG     LQNVS  ++ L+ VG+
Subjt:  LLHFHKNVGAALPPLQNVSAASLHLKNVGV

A0A673WGR5 Uncharacterized protein1.5e-0734.58Show/hide
Query:  ASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQNVDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALPPLQNVSAASLHL
        A L HL+ +G +L HL+ +GA + H +  G    +L+    +GA+L H Q  GA L  L+  GAV  H +   A L H  + +G  L  L+   A + HL
Subjt:  ASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQNVDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAALPPLQNVSAASLHL

Query:  KNVGVAL
        +  G  L
Subjt:  KNVGVAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGCAACTTCACTCCATCTTTAGAATGTTGGTGCAACTTCGTGCCATCTCCAAAAATGTTGGTGCATCTTTGCTACATCTCCAAAATGTTGGTGTAGTTTTGCT
CCATCTCCAAAACGCTGGTGCAACTTCGCAGCATTTCCAAAATGTTGGTGCATCTTCGCTCTATCTCCAAAATGTTGATAATGCTGGTGCAATTTTGCTCCATCTCCAGA
ATGTTGGTGCAACTTTGCCTCCTCTCCAAAATGTTGGTGCAGTTTCACATCATTTCCAAAATGTTGGTGCAACTTTGCTCCATTTCCATAAGAATGTTGGTGCAGCTCTG
CCTCCTCTCCAAAATGTTAGCGCAGCTTCTCTTCATCTAAAAAATGTAGGTGTAGCTTTGCCTCCTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATGCAACTTCACTCCATCTTTAGAATGTTGGTGCAACTTCGTGCCATCTCCAAAAATGTTGGTGCATCTTTGCTACATCTCCAAAATGTTGGTGTAGTTTTGCT
CCATCTCCAAAACGCTGGTGCAACTTCGCAGCATTTCCAAAATGTTGGTGCATCTTCGCTCTATCTCCAAAATGTTGATAATGCTGGTGCAATTTTGCTCCATCTCCAGA
ATGTTGGTGCAACTTTGCCTCCTCTCCAAAATGTTGGTGCAGTTTCACATCATTTCCAAAATGTTGGTGCAACTTTGCTCCATTTCCATAAGAATGTTGGTGCAGCTCTG
CCTCCTCTCCAAAATGTTAGCGCAGCTTCTCTTCATCTAAAAAATGTAGGTGTAGCTTTGCCTCCTTTATGA
Protein sequenceShow/hide protein sequence
MSMQLHSIFRMLVQLRAISKNVGASLLHLQNVGVVLLHLQNAGATSQHFQNVGASSLYLQNVDNAGAILLHLQNVGATLPPLQNVGAVSHHFQNVGATLLHFHKNVGAAL
PPLQNVSAASLHLKNVGVALPPL