; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G011840 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G011840
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPoly(A)-specific ribonuclease
Genome locationCG_Chr02:24983844..24984776
RNA-Seq ExpressionClCG02G011840
SyntenyClCG02G011840
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045730.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]8.8e-11468.17Show/hide
Query:  MGRRNRAPPRR-EKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFS
        MG RN+   RR +KP IRQVWASNF+SEI++FD+CL+FH+IL+IDTEFPGFI +SP  S +EEIY++FR NVNQ KLIQLGITAS++ GQIGG+WEFNFS
Subjt:  MGRRNRAPPRR-EKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFS

Query:  DFDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMS
        DFD Q D+H PS++ FLE NG+DF+KLKK GIPI  FT  FL II+K ++FRWVTFHGLYDIGYLIKAMGLI +LP+SMEEFAT+VV  VGIVRDLKHM+
Subjt:  DFDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMS

Query:  RFCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPL
        RFCEGLEDG+LGLERLG++LN+KR+G KHNAGSDSLLTAS+H EM++RFGM   +C+GFLYGFS  LES        MKM +YHH  ++R GQIP     
Subjt:  RFCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPL

Query:  YCYTPSYYIAY
        + YTPS  I++
Subjt:  YCYTPSYYIAY

KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]6.6e-10162.63Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MGRRNRA PRR  P I++VWASNFD EI + ++CLQ + ILSIDTEFPG I  +PWGS +E +YED R NVNQTKLIQLG+TASD SGQ+ G+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR
        FD Q D   PSS+SFLE NG+DF KLKK GIP++LFT+NF  IIR+  V +WVTFHGLYDIGYL+KAMG+   LPESMEEFA +V  GVG+VRDLK ++R
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSI
        +CEGLE G++GLERLG+LL +KR+G KH+AGSDSLLTA  H +M   F ++ G  DG LYG  NKLE MK+              + I FGQI  S+
Subjt:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSI

XP_022947867.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]6.8e-9865.06Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MGRRNR  PRR  P I++VWASNFD EI + ++CLQ + ILSIDTEFPG I  +PWGS +E +YED R NVNQTKLIQLG+TASD SGQ+ G+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR
        FD Q D   PSS++FLE NG+DF KLKK GIP++LFT+NF  IIR+  V +WVTFHGLYDIGYL+KAMG+   LPESMEEFA +V  GVG+VRDLK ++R
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM
        +CEGLE G++GLERLG+LL +KR+G KH+AGSDSLLTA  H +M   F ++    DG LYG  NKL+ M
Subjt:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM

XP_031736916.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]1.7e-11769.13Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MG RN+    REKPLIRQVWASNFDSEI++FD+CL+FH+IL+IDTEFPGFI +SP GS ++E+Y+DF  NVNQTKLIQLGITASD+ GQIGG+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR
        FD ++DAH P ++ FLE NG+D +K+KKDGIPI  FT  FL I+RK ++FRWVTFHGLYDIGYLIKAMGLI +LP+SMEEFATVVV  VGIVRDLKHM++
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLED-GKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPL
        FCEGL+D G+LGLERLG+LLN KR+G KHNAGSDSLLTAS+HLEM+ERFGM+  +C+GFLYGFS  LES    MKMKMKMK+ HH  ++RF         
Subjt:  FCEGLED-GKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPL

Query:  YCYTPSYYIAY
          Y P Y++ Y
Subjt:  YCYTPSYYIAY

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]2.2e-12573.42Show/hide
Query:  RREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHG
        R  K LI +VWASNFD+EISK ++CL+FH+I+SIDTEFPGFI  SPWGS +E +YEDFR NVNQTKLIQLG+TA D+SG+IGG+WEFNFSDFDP+ DA  
Subjt:  RREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHG

Query:  PSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGK
        PSS SFLE NG+DF KLKK GIPI LFT  F+ IIRKHNVFRWVTFHGLYDIGYLIKAMG+  +LPE+MEEFATVVV  +GIVRDLKHM+RFCEGLEDGK
Subjt:  PSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGK

Query:  LGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPLYCYTPSYYIA
        LGLERLG+LL+QKRYG KHNAGSDSLLTAS+H EM++RF MD  ICDG+LYGFSNKL+SM + M M        H K+I FGQIP++IPLYCY PSY   
Subjt:  LGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPLYCYTPSYYIA

Query:  Y
        Y
Subjt:  Y

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease8.3e-11869.13Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MG RN+    REKPLIRQVWASNFDSEI++FD+CL+FH+IL+IDTEFPGFI +SP GS ++E+Y+DF  NVNQTKLIQLGITASD+ GQIGG+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR
        FD ++DAH P ++ FLE NG+D +K+KKDGIPI  FT  FL I+RK ++FRWVTFHGLYDIGYLIKAMGLI +LP+SMEEFATVVV  VGIVRDLKHM++
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLED-GKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPL
        FCEGL+D G+LGLERLG+LLN KR+G KHNAGSDSLLTAS+HLEM+ERFGM+  +C+GFLYGFS  LES    MKMKMKMK+ HH  ++RF         
Subjt:  FCEGLED-GKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPL

Query:  YCYTPSYYIAY
          Y P Y++ Y
Subjt:  YCYTPSYYIAY

A0A5A7TRG1 Poly(A)-specific ribonuclease4.3e-11468.17Show/hide
Query:  MGRRNRAPPRR-EKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFS
        MG RN+   RR +KP IRQVWASNF+SEI++FD+CL+FH+IL+IDTEFPGFI +SP  S +EEIY++FR NVNQ KLIQLGITAS++ GQIGG+WEFNFS
Subjt:  MGRRNRAPPRR-EKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFS

Query:  DFDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMS
        DFD Q D+H PS++ FLE NG+DF+KLKK GIPI  FT  FL II+K ++FRWVTFHGLYDIGYLIKAMGLI +LP+SMEEFAT+VV  VGIVRDLKHM+
Subjt:  DFDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMS

Query:  RFCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPL
        RFCEGLEDG+LGLERLG++LN+KR+G KHNAGSDSLLTAS+H EM++RFGM   +C+GFLYGFS  LES        MKM +YHH  ++R GQIP     
Subjt:  RFCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPL

Query:  YCYTPSYYIAY
        + YTPS  I++
Subjt:  YCYTPSYYIAY

A0A6J1CXP9 Poly(A)-specific ribonuclease1.1e-9658.39Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MGR  R   RR    IR+VW+ NFD E++  + CL  + IL+IDTEFPGFI  +PWG+ EE++Y+DFR NVN+TKLIQLG+TASD  G IG TWEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR
        FDPQ D H  SSVSFL+ NG+DF KLK+ GIPI  FT     + RKH + RWVTFHGLYDIGYL+KAMG+   +PESMEEFA +V   +G V DLKHM++
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPLY
        FCEGLEDGKLGLE+L QL+NQKR+G KH+AGSDSLLTAS + +M  +F +   +CDGFLYG         +++K+  K+K+Y +   + FGQIP+ +   
Subjt:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPLY

Query:  CYTPSYYIAY
        CY P  YIAY
Subjt:  CYTPSYYIAY

A0A6J1G7L2 Poly(A)-specific ribonuclease3.3e-9865.06Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MGRRNR  PRR  P I++VWASNFD EI + ++CLQ + ILSIDTEFPG I  +PWGS +E +YED R NVNQTKLIQLG+TASD SGQ+ G+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR
        FD Q D   PSS++FLE NG+DF KLKK GIP++LFT+NF  IIR+  V +WVTFHGLYDIGYL+KAMG+   LPESMEEFA +V  GVG+VRDLK ++R
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM
        +CEGLE G++GLERLG+LL +KR+G KH+AGSDSLLTA  H +M   F ++    DG LYG  NKL+ M
Subjt:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM

A0A6J1G7T4 Poly(A)-specific ribonuclease1.2e-9563.22Show/hide
Query:  PRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAH
        PR + PLIR+VWA N D EI + D+CL  +SI+SIDTEFPG I ++PWG+ +EE+Y DFR NVNQTK+IQLG+T SD SG IGGTWEFNFSDFDP+ DAH
Subjt:  PRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAH

Query:  GPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDG
         P+S+ FL+ NG+DF KLKKDGI +  F + FL  + KH ++RWVTFHGLYDIGYL+ AMG++  LPE++ EF  +V   VG VRDLKHM+RFCEGLE G
Subjt:  GPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDG

Query:  KLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM
         LGLE+LGQLL+QKR+G KH+AGSDSL+TA  H +M++R+     ICDGFLYG S K E +
Subjt:  KLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 54.8e-3839.91Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N  +E++    CL+  + ++IDTEFPG + ++P  +++E  Y D + NV+ T LIQLG+T       I  TWE N SDF+         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTVNFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
        +NG+D  K++++GI I  F + F  I+  KH   RWVTF G YD  YL+K +     LPE+ +EF   V + +G  V D+K M+  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTVNFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  +R G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

Q9C6M9 Putative CCR4-associated factor 1 homolog 45.3e-3740.36Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N + E+     CL+  S ++IDTEFPG + ++P  ++EE  Y D + NV+ T LIQLG T  D  G I  TWE N SDF+         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTVNFLSIIR-KHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
         NG++  K+ ++GI I  F  +F  I++ K     WV F G YD  YL+K +     LPE+ EEF   V + +G  V D+K ++  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTVNFLSIIR-KHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

Q9LXM4 Putative CCR4-associated factor 1 homolog 82.8e-3841.44Show/hide
Query:  ISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLEDNGMDFQKLK
        +S  + CL+ +  ++IDTEFP  + ++   +T+EE Y D   +V++ KLIQLG+T  D +G+IGGTWE NFSDF    DA    S+ FL  NG+D +K++
Subjt:  ISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLEDNGMDFQKLK

Query:  KDGIPIT-LFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKLGLERLGQLLNQKRYGW
        ++GI I   F+  F  + +      WVTFHG YDI YL+K     A LP + E F+  V   +G V DLK M+  CEGL   +LGLE L       R G 
Subjt:  KDGIPIT-LFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKLGLERLGQLLNQKRYGW

Query:  KHNAGSDSLLTASSHLEMMERF
         H+AGS++ LTA    +++  F
Subjt:  KHNAGSDSLLTASSHLEMMERF

Q9SFX6 Putative CCR4-associated factor 1 homolog 32.4e-3740.36Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N + E++    CL+  S ++IDTEFPG + ++P  ++EE  Y D + NV+ T LIQLG T  D  G    TWE N SDFD         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTVNFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
         NG++  K++++GI I  F  +F  I+  K     WV F G YD  YL+K +     LPE+ EEF   V + +G  V D+K ++  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTVNFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.2e-4439.44Show/hide
Query:  KPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSS
        +PL R+VW SN D E+++  +CL+   +++ DTE+PG I ++ + S+ +E Y   + NV  TKLIQ G T  +  G+IGG WE NFS+F   SD     S
Subjt:  KPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSS

Query:  VSFLEDNGMDFQKLKKDGIPI--TLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL
        + FL  +G+D QK++ +G+ +    F    +++ R      +VTF G YD  Y +  +     LPE+  EFAT VV+  G V D K M+ FCEGL +  L
Subjt:  VSFLEDNGMDFQKLKKDGIPI--TLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL

Query:  GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYG
        GL +L QLL   R G  H+AGSDSL+TA   +++   +  D     G +YG
Subjt:  GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYG

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.4e-4639.44Show/hide
Query:  KPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSS
        +PL R+VW SN D E+++  +CL+   +++ DTE+PG I ++ + S+ +E Y   + NV  TKLIQ G T  +  G+IGG WE NFS+F   SD     S
Subjt:  KPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSS

Query:  VSFLEDNGMDFQKLKKDGIPI--TLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL
        + FL  +G+D QK++ +G+ +    F    +++ R      +VTF G YD  Y +  +     LPE+  EFAT VV+  G V D K M+ FCEGL +  L
Subjt:  VSFLEDNGMDFQKLKKDGIPI--TLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL

Query:  GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYG
        GL +L QLL   R G  H+AGSDSL+TA   +++   +  D     G +YG
Subjt:  GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYG

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-3840.36Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N + E++    CL+  S ++IDTEFPG + ++P  ++EE  Y D + NV+ T LIQLG T  D  G    TWE N SDFD         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTVNFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
         NG++  K++++GI I  F  +F  I+  K     WV F G YD  YL+K +     LPE+ EEF   V + +G  V D+K ++  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTVNFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.8e-3840.36Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N + E+     CL+  S ++IDTEFPG + ++P  ++EE  Y D + NV+ T LIQLG T  D  G I  TWE N SDF+         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTVNFLSIIR-KHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
         NG++  K+ ++GI I  F  +F  I++ K     WV F G YD  YL+K +     LPE+ EEF   V + +G  V D+K ++  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTVNFLSIIR-KHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-3939.91Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N  +E++    CL+  + ++IDTEFPG + ++P  +++E  Y D + NV+ T LIQLG+T       I  TWE N SDF+         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTVNFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
        +NG+D  K++++GI I  F + F  I+  KH   RWVTF G YD  YL+K +     LPE+ +EF   V + +G  V D+K M+  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTVNFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  +R G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-3941.44Show/hide
Query:  ISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLEDNGMDFQKLK
        +S  + CL+ +  ++IDTEFP  + ++   +T+EE Y D   +V++ KLIQLG+T  D +G+IGGTWE NFSDF    DA    S+ FL  NG+D +K++
Subjt:  ISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLEDNGMDFQKLK

Query:  KDGIPIT-LFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKLGLERLGQLLNQKRYGW
        ++GI I   F+  F  + +      WVTFHG YDI YL+K     A LP + E F+  V   +G V DLK M+  CEGL   +LGLE L       R G 
Subjt:  KDGIPIT-LFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKLGLERLGQLLNQKRYGW

Query:  KHNAGSDSLLTASSHLEMMERF
         H+AGS++ LTA    +++  F
Subjt:  KHNAGSDSLLTASSHLEMMERF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGAAGAAATCGAGCACCTCCGAGAAGAGAAAAGCCTTTGATCCGACAAGTTTGGGCTTCGAATTTCGATTCCGAAATCTCCAAATTCGACAAATGTCTT
CAATTTCATTCCATTCTGTCTATCGACACAGAATTTCCTGGGTTTATTACAAAATCCCCTTGGGGTTCGACTGAAGAAGAGATATATGAAGATTTCCGATCCAAT
GTAAACCAAACCAAATTGATTCAACTGGGTATTACGGCTTCTGATAATTCGGGACAAATCGGCGGTACATGGGAGTTCAATTTCTCCGATTTCGACCCACAATCC
GACGCTCATGGCCCTTCCTCTGTTTCGTTTCTGGAAGACAACGGCATGGATTTCCAAAAACTGAAGAAAGACGGAATACCCATCACATTATTCACCGTAAATTTT
TTGAGCATCATACGAAAACATAATGTTTTCAGATGGGTTACCTTCCATGGGTTGTACGATATCGGGTATTTGATCAAAGCCATGGGTTTAATCGCCATCTTGCCG
GAATCAATGGAGGAATTCGCGACGGTGGTGGTGGAGGGAGTGGGAATCGTGAGGGATTTGAAACATATGTCTCGATTTTGTGAGGGATTGGAAGATGGGAAACTT
GGGCTGGAAAGATTAGGGCAATTGCTCAATCAAAAACGGTATGGATGGAAGCATAATGCTGGATCGGATAGTTTGCTTACGGCTTCTTCCCATTTGGAAATGATG
GAACGATTTGGCATGGATCCAGGAATTTGTGATGGCTTTTTGTATGGCTTTTCGAATAAGCTTGAATCCATGAAGATGAAGATGAAGATGAAGATGAAGATGAAG
GTTTATCATCATCCCAAGATGATTCGATTTGGTCAAATTCCATGGTCAATCCCACTTTATTGTTATACTCCTTCTTATTACATTGCTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGAAGAAATCGAGCACCTCCGAGAAGAGAAAAGCCTTTGATCCGACAAGTTTGGGCTTCGAATTTCGATTCCGAAATCTCCAAATTCGACAAATGTCTT
CAATTTCATTCCATTCTGTCTATCGACACAGAATTTCCTGGGTTTATTACAAAATCCCCTTGGGGTTCGACTGAAGAAGAGATATATGAAGATTTCCGATCCAAT
GTAAACCAAACCAAATTGATTCAACTGGGTATTACGGCTTCTGATAATTCGGGACAAATCGGCGGTACATGGGAGTTCAATTTCTCCGATTTCGACCCACAATCC
GACGCTCATGGCCCTTCCTCTGTTTCGTTTCTGGAAGACAACGGCATGGATTTCCAAAAACTGAAGAAAGACGGAATACCCATCACATTATTCACCGTAAATTTT
TTGAGCATCATACGAAAACATAATGTTTTCAGATGGGTTACCTTCCATGGGTTGTACGATATCGGGTATTTGATCAAAGCCATGGGTTTAATCGCCATCTTGCCG
GAATCAATGGAGGAATTCGCGACGGTGGTGGTGGAGGGAGTGGGAATCGTGAGGGATTTGAAACATATGTCTCGATTTTGTGAGGGATTGGAAGATGGGAAACTT
GGGCTGGAAAGATTAGGGCAATTGCTCAATCAAAAACGGTATGGATGGAAGCATAATGCTGGATCGGATAGTTTGCTTACGGCTTCTTCCCATTTGGAAATGATG
GAACGATTTGGCATGGATCCAGGAATTTGTGATGGCTTTTTGTATGGCTTTTCGAATAAGCTTGAATCCATGAAGATGAAGATGAAGATGAAGATGAAGATGAAG
GTTTATCATCATCCCAAGATGATTCGATTTGGTCAAATTCCATGGTCAATCCCACTTTATTGTTATACTCCTTCTTATTACATTGCTTATTAA
Protein sequenceShow/hide protein sequence
MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRSNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQS
DAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTVNFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAILPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL
GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKMKMKVYHHPKMIRFGQIPWSIPLYCYTPSYYIAY