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ClCG02G012200 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G012200
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransmembrane protein
Genome locationCG_Chr02:25495544..25500989
RNA-Seq ExpressionClCG02G012200
SyntenyClCG02G012200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045764.1 hypothetical protein E6C27_scaffold243G002850 [Cucumis melo var. makuwa]2.4e-1787.27Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSSS
        M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKL+EEA AKETGT+++S
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSSS
KAG7035190.1 hypothetical protein SDJN02_01985, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-1865.38Show/hide
Query:  KSYRKPQNLTFRFVVLVLLLGLEVKMFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTS
        +++++  N  FRF           +M GRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYW+KKLDEEA AK++GTT+
Subjt:  KSYRKPQNLTFRFVVLVLLLGLEVKMFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTS
ONI02716.1 hypothetical protein PRUPE_6G217600 [Prunus persica]2.6e-1687.04Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
        MFGRSRFLSFPMVIGAV+IGVVSGKAIFGPPLDEYWKKK  EEA AKET  +SS
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
PNT26302.1 hypothetical protein POPTR_007G006700 [Populus trichocarpa]1.2e-1688.89Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
        MF RSRFLSFP+VIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEA AKET T+S+
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
XP_022149438.1 uncharacterized protein LOC111017867 [Momordica charantia]7.4e-1994.44Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
        MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKL+EEATAK+TGT+SS
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
TrEMBL top hitse value%identityAlignment
A0A0A0LPX1 Uncharacterized protein1.1e-1787.27Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSSS
        M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKL+EEA AKETGT+++S
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSSS
A0A251NTQ5 Uncharacterized protein1.3e-1687.04Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
        MFGRSRFLSFPMVIGAV+IGVVSGKAIFGPPLDEYWKKK  EEA AKET  +SS
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
A0A5D3BMY9 Uncharacterized protein1.1e-1787.27Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSSS
        M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKL+EEA AKETGT+++S
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSSS
A0A6J1D6S8 uncharacterized protein LOC1110178673.6e-1994.44Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
        MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKL+EEATAK+TGT+SS
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
U5GB04 Uncharacterized protein5.7e-1788.89Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
        MF RSRFLSFP+VIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEA AKET T+S+
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65880.1 unknown protein1.5e-1470.18Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEE--ATAKETGTTSSS
        MF R+RFLS PMVIGAV+IGVVSGKAIFGPPLD+YWK+KL+ E    AKE     SS
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEE--ATAKETGTTSSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTCTACAGTCGCAGCTTTCAGTTAATTGAGCAATTAAACACACATCCATCATCAGAATCAATCAGCGAAAGAACTTCACATAGAGAAGCTATAAAATGGAGGGT
GGAATTGGGGGCAGAGGGAAATTTGGAAGGGAGGTTGAAAGTGAAAGAGGAGGGGAAAATCGAAAGAGAAGCGGATCGAAAAGGGTTTTGGGTGCGAGCAGAAATCGAAT
TCATTGCTCTGAAGCTTCACTATGAAGTGAAATCGTATCGTAAGCCACAAAATTTAACTTTCAGATTTGTTGTGCTTGTTCTTCTTCTTGGATTAGAGGTCAAAATGTTC
GGTCGAAGCAGGTTCCTCTCGTTTCCCATGGTAATTGGTGCTGTCATCATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAA
GCTAGACGAAGAGGCAACCGCGAAGGAGACAGGCACTACCAGCTCAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAATTCTACAGTCGCAGCTTTCAGTTAATTGAGCAATTAAACACACATCCATCATCAGAATCAATCAGCGAAAGAACTTCACATAGAGAAGCTATAAAATGGAGGGT
GGAATTGGGGGCAGAGGGAAATTTGGAAGGGAGGTTGAAAGTGAAAGAGGAGGGGAAAATCGAAAGAGAAGCGGATCGAAAAGGGTTTTGGGTGCGAGCAGAAATCGAAT
TCATTGCTCTGAAGCTTCACTATGAAGTGAAATCGTATCGTAAGCCACAAAATTTAACTTTCAGATTTGTTGTGCTTGTTCTTCTTCTTGGATTAGAGGTCAAAATGTTC
GGTCGAAGCAGGTTCCTCTCGTTTCCCATGGTAATTGGTGCTGTCATCATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAA
GCTAGACGAAGAGGCAACCGCGAAGGAGACAGGCACTACCAGCTCAAGTTAG
Protein sequenceShow/hide protein sequence
MQFYSRSFQLIEQLNTHPSSESISERTSHREAIKWRVELGAEGNLEGRLKVKEEGKIEREADRKGFWVRAEIEFIALKLHYEVKSYRKPQNLTFRFVVLVLLLGLEVKMF
GRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEATAKETGTTSSS