; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G012440 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G012440
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionFRIGIDA-like protein
Genome locationCG_Chr02:25883547..25887401
RNA-Seq ExpressionClCG02G012440
SyntenyClCG02G012440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045783.1 FRIGIDA-like protein 5 isoform X1 [Cucumis melo var. makuwa]1.2e-2445.64Show/hide
Query:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------
        +W  +N   LC+AHEQL+S+ASS LL             S+ E +   YE+++R EK I L+EE+L D++K I E+SKE ELKKNEL+            
Subjt:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------

Query:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
                       +L +QKL+ ++ LIE++ MECE K K  ESI  LL++HEEEL IK K++D IQ M+IK SN ELK KEK+ ETIQN IAT
Subjt:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

XP_016902126.1 PREDICTED: FRIGIDA-like protein 5 isoform X1 [Cucumis melo]1.2e-2445.64Show/hide
Query:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------
        +W  +N   LC+AHEQL+S+ASS LL             S+ E +   YE+++R EK I L+EE+L D++K I E+SKE ELKKNEL+            
Subjt:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------

Query:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
                       +L +QKL+ ++ LIE++ MECE K K  ESI  LL++HEEEL IK K++D IQ M+IK SN ELK KEK+ ETIQN IAT
Subjt:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

XP_016902129.1 PREDICTED: FRIGIDA-like protein 5 isoform X2 [Cucumis melo]1.2e-2445.64Show/hide
Query:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------
        +W  +N   LC+AHEQL+S+ASS LL             S+ E +   YE+++R EK I L+EE+L D++K I E+SKE ELKKNEL+            
Subjt:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------

Query:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
                       +L +QKL+ ++ LIE++ MECE K K  ESI  LL++HEEEL IK K++D IQ M+IK SN ELK KEK+ ETIQN IAT
Subjt:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

XP_038900711.1 FRIGIDA-like protein 5 isoform X3 [Benincasa hispida]5.9e-2441.53Show/hide
Query:  SLCRAHEQLNSKASSSLLSSM-------------EGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELSKLN-----------------
        +LC+AHEQL+S+ASS LL S+             E ++   E+L+R EKA+AL+E RLDDVKKSIDE SK  E KKNELS+LN                 
Subjt:  SLCRAHEQLNSKASSSLLSSM-------------EGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELSKLN-----------------

Query:  -----------------------------------------------------------QQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPI
                                                                   +QKL+G++ LIE++ MECEFK KS+ESIR LLQE+EEEL I
Subjt:  -----------------------------------------------------------QQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPI

Query:  KEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
        KEK+ D IQ M+IK S  ELK KEK+ ETIQN IAT
Subjt:  KEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

XP_038900712.1 FRIGIDA-like protein 5 isoform X4 [Benincasa hispida]5.9e-2441.53Show/hide
Query:  SLCRAHEQLNSKASSSLLSSM-------------EGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELSKLN-----------------
        +LC+AHEQL+S+ASS LL S+             E ++   E+L+R EKA+AL+E RLDDVKKSIDE SK  E KKNELS+LN                 
Subjt:  SLCRAHEQLNSKASSSLLSSM-------------EGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELSKLN-----------------

Query:  -----------------------------------------------------------QQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPI
                                                                   +QKL+G++ LIE++ MECEFK KS+ESIR LLQE+EEEL I
Subjt:  -----------------------------------------------------------QQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPI

Query:  KEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
        KEK+ D IQ M+IK S  ELK KEK+ ETIQN IAT
Subjt:  KEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

TrEMBL top hitse value%identityAlignment
A0A0A0LMH5 Uncharacterized protein7.0e-2339.34Show/hide
Query:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELSKLN---------
        +W  +N   LC+AHEQL+S+ASS LL             S+ E +    E+++R EKAIAL+EE+L D++K I E SKE EL+KNELS+LN         
Subjt:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELSKLN---------

Query:  -------------------------------------------------------------------QQKLDGMVHLIEKQPMECEFKVKSIESIRALLQ
                                                                           +QKL+G++ LIE++ MECE K KS+ESIRALL+
Subjt:  -------------------------------------------------------------------QQKLDGMVHLIEKQPMECEFKVKSIESIRALLQ

Query:  EHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
         HEEEL IKEK++D IQ M+IK SN ELK KEK+ ETIQN IAT
Subjt:  EHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

A0A1S4E1M5 FRIGIDA-like protein 5 isoform X25.8e-2545.64Show/hide
Query:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------
        +W  +N   LC+AHEQL+S+ASS LL             S+ E +   YE+++R EK I L+EE+L D++K I E+SKE ELKKNEL+            
Subjt:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------

Query:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
                       +L +QKL+ ++ LIE++ MECE K K  ESI  LL++HEEEL IK K++D IQ M+IK SN ELK KEK+ ETIQN IAT
Subjt:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

A0A1S4E1M7 FRIGIDA-like protein 5 isoform X15.8e-2545.64Show/hide
Query:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------
        +W  +N   LC+AHEQL+S+ASS LL             S+ E +   YE+++R EK I L+EE+L D++K I E+SKE ELKKNEL+            
Subjt:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------

Query:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
                       +L +QKL+ ++ LIE++ MECE K K  ESI  LL++HEEEL IK K++D IQ M+IK SN ELK KEK+ ETIQN IAT
Subjt:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

A0A5D3BMW7 FRIGIDA-like protein 5 isoform X15.8e-2545.64Show/hide
Query:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------
        +W  +N   LC+AHEQL+S+ASS LL             S+ E +   YE+++R EK I L+EE+L D++K I E+SKE ELKKNEL+            
Subjt:  DWGNANAISLCRAHEQLNSKASSSLL-------------SSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELS------------

Query:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
                       +L +QKL+ ++ LIE++ MECE K K  ESI  LL++HEEEL IK K++D IQ M+IK SN ELK KEK+ ETIQN IAT
Subjt:  ---------------KLNQQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

A0A6J1EY41 uncharacterized protein LOC111439474 isoform X11.1e-2037.29Show/hide
Query:  SLCRAHEQLNSKASSSLLSSMEG-------------LRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELSKLN-----------------
        SL +AHE+L+ +ASS LL S++              ++  YE+L+R EKAI L+EE+L+DV+KSID  SKE ELKKNEL +LN                 
Subjt:  SLCRAHEQLNSKASSSLLSSMEG-------------LRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELSKLN-----------------

Query:  -----------------------------------------------------------QQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPI
                                                                   +QKL+G++ LIE++ +EC+FK KS+E I+ LLQEHE+EL  
Subjt:  -----------------------------------------------------------QQKLDGMVHLIEKQPMECEFKVKSIESIRALLQEHEEELPI

Query:  KEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT
        K+K+YD IQ M+IK S+ ELK KEK+ +TIQN IAT
Subjt:  KEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGATTGGGGAAATGCAAACGCAATTAGTCTCTGCAGAGCACACGAACAATTAAATTCAAAGGCTTCTTCGTCTTTGCTGTCTTCGATGGAAGGACTTAGAGG
CGCATACGAGGATCTTAAGCGACATGAGAAGGCAATTGCATTGCAGGAAGAGCGCTTGGATGATGTGAAGAAATCTATCGATGAAAGCTCAAAGGAGGATGAGTTGAAGA
AAAATGAACTAAGCAAGTTGAATCAACAAAAATTAGATGGCATGGTGCACTTAATCGAAAAACAACCAATGGAATGTGAGTTCAAGGTAAAGAGTATTGAATCGATAAGA
GCATTGCTTCAAGAACATGAAGAAGAGCTTCCAATCAAAGAAAAGGAATATGATACAATCCAGATGATGTCAATTAAAATGAGCAACAAAGAGCTCAAACCAAAAGAAAA
GAAGCGCGAGACAATTCAAAATACGATTGCCACTATAGGTGGCAAGGGAAAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGATTGGGGAAATGCAAACGCAATTAGTCTCTGCAGAGCACACGAACAATTAAATTCAAAGGCTTCTTCGTCTTTGCTGTCTTCGATGGAAGGACTTAGAGG
CGCATACGAGGATCTTAAGCGACATGAGAAGGCAATTGCATTGCAGGAAGAGCGCTTGGATGATGTGAAGAAATCTATCGATGAAAGCTCAAAGGAGGATGAGTTGAAGA
AAAATGAACTAAGCAAGTTGAATCAACAAAAATTAGATGGCATGGTGCACTTAATCGAAAAACAACCAATGGAATGTGAGTTCAAGGTAAAGAGTATTGAATCGATAAGA
GCATTGCTTCAAGAACATGAAGAAGAGCTTCCAATCAAAGAAAAGGAATATGATACAATCCAGATGATGTCAATTAAAATGAGCAACAAAGAGCTCAAACCAAAAGAAAA
GAAGCGCGAGACAATTCAAAATACGATTGCCACTATAGGTGGCAAGGGAAAAGATTAG
Protein sequenceShow/hide protein sequence
MEIDWGNANAISLCRAHEQLNSKASSSLLSSMEGLRGAYEDLKRHEKAIALQEERLDDVKKSIDESSKEDELKKNELSKLNQQKLDGMVHLIEKQPMECEFKVKSIESIR
ALLQEHEEELPIKEKEYDTIQMMSIKMSNKELKPKEKKRETIQNTIATIGGKGKD