; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G012990 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G012990
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionC2H2-type domain-containing protein
Genome locationCG_Chr02:26782756..26785027
RNA-Seq ExpressionClCG02G012990
SyntenyClCG02G012990
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651931.1 hypothetical protein Csa_006531, partial [Cucumis sativus]8.5e-3976.85Show/hide
Query:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKKDKDFQEKAS-EEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCKNKSEKEAIMEIEVEKSLGENKSFRKRS
        MDDKS+PYNLRLR+DHK+SSPTEHSKTHK D+DFQEKAS +++YV HL+V+YRCEKCGCSFD+E+SL SHHCKNK+E+EA MEIE    LGENKSFRK+S
Subjt:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKKDKDFQEKAS-EEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCKNKSEKEAIMEIEVEKSLGENKSFRKRS

Query:  RKGIPTRA
        RKG+P RA
Subjt:  RKGIPTRA

KAG6571418.1 hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2868.75Show/hide
Query:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK
        MDDKSVPYNLRLR+DHKAS+ TE SK  K+ +++FQEK  EEV     +  Y C+KCGCSFDL+ SLRSHHCK  NKSEKEA ME EVE+ LG++KS RK
Subjt:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK

Query:  RSRKGIPTRAPF
        R+RKGIPTRAPF
Subjt:  RSRKGIPTRAPF

KAG7011182.1 hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-2867.86Show/hide
Query:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK
        MD+KSVPYNLRLR+DHKAS+ TE SK  K+ +++FQEK  EEV     +  Y C+KCGCSFDL+ SLRSHHCK  NKSEKEA ME EVE+ LG++KS RK
Subjt:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK

Query:  RSRKGIPTRAPF
        R+RKGIPTRAPF
Subjt:  RSRKGIPTRAPF

XP_022928048.1 uncharacterized protein LOC111434950 [Cucurbita moschata]5.2e-2866.37Show/hide
Query:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK
        MD+KSVPYNLRLR+DHKAS+ TE SK  K+ +++FQEK  EEV     +  Y C+KCGCSFDL+ SLRSHHCK  NKSE+EA  E EVE++LG++KS RK
Subjt:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK

Query:  RSRKGIPTRAPFF
        R+RKGIPTRAPFF
Subjt:  RSRKGIPTRAPFF

XP_023511836.1 uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]4.7e-2968.14Show/hide
Query:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK
        MDDKSVPYNLRLR+DHKAS+ TE SK  K+ +++FQEK  EEV     +  Y C+KCGCSFDL+ SLRSHHCK  NKSEKEA ME EV++ LG++KS RK
Subjt:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK

Query:  RSRKGIPTRAPFF
        R+RKGIPTRAPFF
Subjt:  RSRKGIPTRAPFF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ06 C2H2-type domain-containing protein2.0e-4177.48Show/hide
Query:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKKDKDFQEKAS-EEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCKNKSEKEAIMEIEVEKSLGENKSFRKRS
        MDDKS+PYNLRLR+DHK+SSPTEHSKTHK D+DFQEKAS +++YV HL+V+YRCEKCGCSFD+E+SL SHHCKNK+E+EA MEIE    LGENKSFRK+S
Subjt:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKKDKDFQEKAS-EEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCKNKSEKEAIMEIEVEKSLGENKSFRKRS

Query:  RKGIPTRAPFF
        RKG+P RAPFF
Subjt:  RKGIPTRAPFF

A0A6J1D739 uncharacterized protein LOC1110179593.9e-2157.26Show/hide
Query:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHH--CKNKSEKEAIMEIEVEKSLGEN----K
        MDDKS+PYNLRLR   KAS+PTE SK ++K ++DFQEK  EE+      +  RCEKCGC F +E SL SHH  CKNK  +E +    V + L +N    K
Subjt:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHH--CKNKSEKEAIMEIEVEKSLGEN----K

Query:  SFRKRSRKGIPTRAPFF
        SFRKRSRKGIPTRAP F
Subjt:  SFRKRSRKGIPTRAPFF

A0A6J1EMR9 uncharacterized protein LOC1114349502.5e-2866.37Show/hide
Query:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK
        MD+KSVPYNLRLR+DHKAS+ TE SK  K+ +++FQEK  EEV     +  Y C+KCGCSFDL+ SLRSHHCK  NKSE+EA  E EVE++LG++KS RK
Subjt:  MDDKSVPYNLRLRRDHKASSPTEHSKTHKK-DKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCK--NKSEKEAIMEIEVEKSLGENKSFRK

Query:  RSRKGIPTRAPFF
        R+RKGIPTRAPFF
Subjt:  RSRKGIPTRAPFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTGATAGGGTTATGCCCACACTAATGACATTTGAAGCTTCAACAATGGATGACAAATCGGTTCCTTATAATCTTCGACTTCGGAGAGATCACAAAGCTTCTTC
TCCGACTGAACATTCCAAAACTCACAAGAAAGACAAAGATTTTCAGGAAAAGGCAAGTGAAGAAGTATATGTAGGGCATTTAGTTGTGAATTACCGATGTGAAAAATGTG
GATGTTCTTTTGATCTTGAAACCTCTCTTCGTTCACATCATTGCAAAAATAAAAGTGAGAAAGAGGCAATAATGGAAATTGAAGTGGAGAAAAGTTTGGGGGAGAACAAG
TCTTTCAGAAAAAGAAGTAGGAAGGGAATACCAACACGGGCACCTTTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
CTAGGGGATTCAAGTCTTTCTATTCAACCTCTGTCAAGCTCAAGGTCACACATGGTCCCCTCTTTCCCTATTGGGTTTTCCCACTCAAAGGCGAGTCTTTATGCCATTTG
ATAGGGTTATGCCCACACTAATGACATTTGAAGCTTCAACAATGGATGACAAATCGGTTCCTTATAATCTTCGACTTCGGAGAGATCACAAAGCTTCTTCTCCGACTGAA
CATTCCAAAACTCACAAGAAAGACAAAGATTTTCAGGAAAAGGCAAGTGAAGAAGTATATGTAGGGCATTTAGTTGTGAATTACCGATGTGAAAAATGTGGATGTTCTTT
TGATCTTGAAACCTCTCTTCGTTCACATCATTGCAAAAATAAAAGTGAGAAAGAGGCAATAATGGAAATTGAAGTGGAGAAAAGTTTGGGGGAGAACAAGTCTTTCAGAA
AAAGAAGTAGGAAGGGAATACCAACACGGGCACCTTTCTTTTAG
Protein sequenceShow/hide protein sequence
MPFDRVMPTLMTFEASTMDDKSVPYNLRLRRDHKASSPTEHSKTHKKDKDFQEKASEEVYVGHLVVNYRCEKCGCSFDLETSLRSHHCKNKSEKEAIMEIEVEKSLGENK
SFRKRSRKGIPTRAPFF