; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G013070 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G013070
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Genome locationCG_Chr02:26825963..26829923
RNA-Seq ExpressionClCG02G013070
SyntenyClCG02G013070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605258.1 hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia]2.8e-7080.85Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL
        MSD  D+DSDAPEEFTAEQG+QQDEEIRKVQKES AR          VVREGKERRR WAEKKTPR SKKGE VED+AE PR NDQ+ KLGMLPSN+VQL
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL

Query:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        L +REKQVFSSDPGDEKPA K K KRKK+KSSGI+TVLL+ER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLS+SGLLTKK
Subjt:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

KAG7035221.1 hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-7181.38Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL
        MSD  D+DSDAPEEFTAEQG+QQDEEIRKVQKES AR          VVREGKERRR WAEKKTPR SKKGE VED+AE PR NDQ+ KLGMLPSN+VQL
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL

Query:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        L +REKQVFSSDPGDEKPA K K KRKK+KSSGIETVLL+ER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLS+SGLLTKK
Subjt:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

XP_004148046.1 uncharacterized protein LOC101208336 [Cucumis sativus]9.9e-7685.11Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL
        MSDRE++DSDAPEEFTAEQGVQQDEEIRKVQKESKAR          V+REGKERRRLWAEKKTPRPSKKGEIVEDLAEPPR++D+I KLG LPSNIVQL
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL

Query:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        LVDREKQVFSSD GDEKPAIKPK KRKKTKSSGIETVLL+ERTPS CLQNSLEFLKKRKMN+ RSS+VL NPNQA RLLS+SGLLTKK
Subjt:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

XP_008457855.1 PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo]9.3e-7483.6Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL
        MSDRE++DSDAPEEFTAEQGVQQDEEIRKVQ ESKAR          V+REGKERRRLWAEKKTPRPSKKGEIVEDLAEPPR++D++ KLG LPSN+VQL
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL

Query:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTK-SSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        LVDREKQVFSSD GDEKPAIKPK KRKKTK SSGIETVLLSERTPS CLQNSLEFLKKRKMN+ RSS+VL+NPNQA RLLS+SGLLTKK
Subjt:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTK-SSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

XP_038901892.1 uncharacterized protein LOC120088571 [Benincasa hispida]1.2e-7889.95Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRD-NDQIIKLGMLPSNIVQ
        MSDRED+DSDAPEEFTAEQGVQQDEEIRKVQKESKAR          VVREGKERRRLWAEKKTPRPSKKGE VEDLAEPPRD +DQI KLGMLPSNIVQ
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRD-NDQIIKLGMLPSNIVQ

Query:  LLVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        LLVDREKQVFSSDP DEKPAIKPK KRKKTKSSGIETVLLSERTPSQCL NSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLL KK
Subjt:  LLVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

TrEMBL top hitse value%identityAlignment
A0A0A0LM07 Uncharacterized protein4.8e-7685.11Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL
        MSDRE++DSDAPEEFTAEQGVQQDEEIRKVQKESKAR          V+REGKERRRLWAEKKTPRPSKKGEIVEDLAEPPR++D+I KLG LPSNIVQL
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL

Query:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        LVDREKQVFSSD GDEKPAIKPK KRKKTKSSGIETVLL+ERTPS CLQNSLEFLKKRKMN+ RSS+VL NPNQA RLLS+SGLLTKK
Subjt:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

A0A1S3C749 uncharacterized protein LOC1034974404.5e-7483.6Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL
        MSDRE++DSDAPEEFTAEQGVQQDEEIRKVQ ESKAR          V+REGKERRRLWAEKKTPRPSKKGEIVEDLAEPPR++D++ KLG LPSN+VQL
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL

Query:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTK-SSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        LVDREKQVFSSD GDEKPAIKPK KRKKTK SSGIETVLLSERTPS CLQNSLEFLKKRKMN+ RSS+VL+NPNQA RLLS+SGLLTKK
Subjt:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTK-SSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

A0A5A7TWK6 Uncharacterized protein4.5e-7483.6Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL
        MSDRE++DSDAPEEFTAEQGVQQDEEIRKVQ ESKAR          V+REGKERRRLWAEKKTPRPSKKGEIVEDLAEPPR++D++ KLG LPSN+VQL
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL

Query:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTK-SSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        LVDREKQVFSSD GDEKPAIKPK KRKKTK SSGIETVLLSERTPS CLQNSLEFLKKRKMN+ RSS+VL+NPNQA RLLS+SGLLTKK
Subjt:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTK-SSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

A0A6J1DXW1 uncharacterized protein LOC1110251621.5e-6980.21Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL
        MSD ED+DSDAPEEFTAEQG+QQD+EI KVQ ESKAR          VVREGKERRRLWAEKKTPRPSKKGE VED+AE P   DQ  KLGMLPSN+VQL
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL

Query:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTK
        L DREKQVFSSDPGDEKPA KPK KRKKTKSSGIETV+L++R P+QCLQNS+EFLKKRKMNI RSSSVLDNPNQALR LS+SGLLTK
Subjt:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTK

A0A6J1G7P4 uncharacterized protein LOC1114514983.0e-7080.85Show/hide
Query:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL
        MSD  D+DSDAPEEFTAEQG+QQDEEIRKVQKES AR          VVREGKERRR WAEKKTPR SKK E VED+AE PR NDQ+ KLGMLPSN+VQL
Subjt:  MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQL

Query:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        L +REKQVFSSDPGDEKPA K K KRKK+KSSGIETVLL+ER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLS+SGLLTKK
Subjt:  LVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G37090.1 unknown protein4.3e-2945.08Show/hide
Query:  MSDRE--DSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRDNDQIIKLGMLPS
        MSD +  DSDSDAPEE T EQ   ++E + K+Q+E+K R          V RE KERR+L AE+ T R S+K EI+ED+    EP  +++ +   G L  
Subjt:  MSDRE--DSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRDNDQIIKLGMLPS

Query:  NIVQLLVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        +I+  L +REKQ   SD  +E+  I    ++KK KSSGIETV+  E  P +CL+  L+FLK R+  + RSSSV+ N  QALR L+T   L KK
Subjt:  NIVQLLVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK

AT4G37090.2 unknown protein1.1e-2745.08Show/hide
Query:  MSDRE--DSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRDNDQIIKLGMLPS
        MSD +  DSDSDAPEE T EQ   ++E + K+Q+E+K R          V RE KERR+L AE+ T R S+K EI+ED+    EP  +++ +   G L  
Subjt:  MSDRE--DSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLA---EPPRDNDQIIKLGMLPS

Query:  NIVQLLVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK
        +I+  L +REKQ   SD  +E+  I    ++KK KSSGIETV+  E  P +CL+  L+FLK R+  + RSSSV+ N  QALR L+T   L KK
Subjt:  NIVQLLVDREKQVFSSDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGACAGAGAAGATTCCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGGAGTACAGCAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAG
GTGTGTACTCAATCCGTATTTCCCATTACTGGTTGTTCGTGAAGGGAAAGAACGCCGTAGACTGTGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATTG
TCGAAGATTTAGCAGAACCCCCTAGAGATAATGATCAAATTATCAAGTTGGGAATGCTTCCTAGCAATATTGTCCAACTGCTTGTAGACCGTGAGAAACAAGTTTTCTCA
TCAGATCCGGGTGACGAAAAGCCTGCAATTAAGCCAAAACTAAAGCGGAAGAAAACCAAAAGCTCTGGGATTGAAACGGTTCTCTTAAGCGAAAGAACACCATCTCAATG
TTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAATATTACAAGATCATCATCGGTTCTTGATAATCCTAACCAAGCGTTACGGCTTCTTTCTACATCTGGCT
TACTAACTAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
CAAAACTTCCTCTGTTCGGTGTTTCTTCAAAACTTCACATAAACCCTAAAAAGTGAGTTGGGTTCAGATGTCGGACAGAGAAGATTCCGATTCGGACGCTCCCGAGGAGT
TCACCGCCGAGCAGGGAGTACAGCAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAGGTGTGTACTCAATCCGTATTTCCCATTACTGGTTGTTCGTGAA
GGGAAAGAACGCCGTAGACTGTGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATTGTCGAAGATTTAGCAGAACCCCCTAGAGATAATGATCAAATTAT
CAAGTTGGGAATGCTTCCTAGCAATATTGTCCAACTGCTTGTAGACCGTGAGAAACAAGTTTTCTCATCAGATCCGGGTGACGAAAAGCCTGCAATTAAGCCAAAACTAA
AGCGGAAGAAAACCAAAAGCTCTGGGATTGAAACGGTTCTCTTAAGCGAAAGAACACCATCTCAATGTTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAAT
ATTACAAGATCATCATCGGTTCTTGATAATCCTAACCAAGCGTTACGGCTTCTTTCTACATCTGGCTTACTAACTAAGAAGTAACAGTTTTGTTTCAAAGTCTATTTACT
GCATCTCTGTTAGCTTCGACAGGACAATGTATAATGTACTTGAAAATTGGTTGCTAAGAGCAAAAAAGTTTCCGACCATAGCAGAAATTGAAAATGGTGAGAGCATTAAT
GTTGGTAAATTAATGATTTTTATTATGTTGTTTCTACCACCAGGGGCTCGTCTTTGAATACGTTTAAATTTAAAGAAATCATTTACCTGACAA
Protein sequenceShow/hide protein sequence
MSDREDSDSDAPEEFTAEQGVQQDEEIRKVQKESKARCVLNPYFPLLVVREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRDNDQIIKLGMLPSNIVQLLVDREKQVFS
SDPGDEKPAIKPKLKRKKTKSSGIETVLLSERTPSQCLQNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLTKK