; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G013870 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G013870
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationCG_Chr02:27998745..28001184
RNA-Seq ExpressionClCG02G013870
SyntenyClCG02G013870
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143608.1 probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]2.2e-13294.12Show/hide
Query:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMM  ++NN+N++ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKP +V
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV

XP_008445853.2 PREDICTED: probable RNA-binding protein ARP1 isoform X2 [Cucumis melo]2.6e-13093.7Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMM++  ++NT NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A
        LGARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ A
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A

Query:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV
        MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKP +V
Subjt:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV

XP_011654915.1 probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus]2.2e-13294.12Show/hide
Query:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMM  ++NN+N++ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKP +V
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV

XP_038891949.1 probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida]1.4e-13495.65Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMMS+  ++N NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM
        LGARRGGSRSASATPPQ PQPGSNGGGPRTTS  A PGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM

Query:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV
        VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPP+SIMSKPASV
Subjt:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV

XP_038891950.1 probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida]1.4e-13495.65Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMMS+  ++N NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM
        LGARRGGSRSASATPPQ PQPGSNGGGPRTTS  A PGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAM

Query:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV
        VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPP+SIMSKPASV
Subjt:  VGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV

TrEMBL top hitse value%identityAlignment
A0A0A0KNL6 RRM domain-containing protein1.0e-13294.12Show/hide
Query:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMM  ++NN+N++ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMM--SSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKP +V
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV

A0A1S3BD62 probable RNA-binding protein ARP1 isoform X21.3e-13093.7Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMM++  ++NT NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A
        LGARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ A
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A

Query:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV
        MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKP +V
Subjt:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV

A0A1S3BEI0 probable RNA-binding protein ARP1 isoform X11.3e-13093.7Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMM++  ++NT NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A
        LGARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ A
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A

Query:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV
        MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKP +V
Subjt:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV

A0A5A7SY01 Putative RNA-binding protein ARP1 isoform X13.7e-13093.31Show/hide
Query:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
        MTMM++  ++NT NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS
Subjt:  MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLAS

Query:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A
        LGARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ A
Subjt:  LGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ-A

Query:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV
        MVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKP +V
Subjt:  MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV

A0A6J1FUE8 probable RNA-binding protein ARP1 isoform X17.0e-12184.42Show/hide
Query:  NTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRS
        + NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR GSRS
Subjt:  NTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRS

Query:  ASATPPQGPQ-PGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPMY
        ASATPPQ PQ PGSNGGGPRTTS A  GNHVQWYYPAGT+PT F HQPHQ VPFYGYSPSPTYIATDISYNHK+GYMNGHY Q+YPGQAMVGANTLMPMY
Subjt:  ASATPPQGPQ-PGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPMY

Query:  PLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV--------------QLEEDAGDDDDGKRRAEKN
        PLYHYHQSHAMGMPAHI+PPSPT     AAVPP+SIMSKPASV              + EE+  DD+DGKRRA+KN
Subjt:  PLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPASV--------------QLEEDAGDDDDGKRRAEKN

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 383.2e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q6GQD3 RNA-binding protein 24-A4.2e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9BX46 RNA-binding protein 242.5e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGEI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9I8B3 RNA-binding protein 24-B4.2e-2257.65Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9M1S3 Probable RNA-binding protein ARP16.9e-5752.87Show/hide
Query:  SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS
        SNN N  G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R   S
Subjt:  SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS

Query:  RSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--------
         + + +P QGP+ G+        +P   GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P        
Subjt:  RSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--------

Query:  ----------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS
                  G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Subjt:  ----------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.6e-3843.22Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY

Query:  ---------------PLYHYHQSHAMGMPAHIFPPS
                       P YH+  S+    P H  PP+
Subjt:  ---------------PLYHYHQSHAMGMPAHIFPPS

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.6e-3843.22Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY

Query:  ---------------PLYHYHQSHAMGMPAHIFPPS
                       P YH+  S+    P H  PP+
Subjt:  ---------------PLYHYHQSHAMGMPAHIFPPS

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein9.6e-3843.22Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY

Query:  ---------------PLYHYHQSHAMGMPAHIFPPS
                       P YH+  S+    P H  PP+
Subjt:  ---------------PLYHYHQSHAMGMPAHIFPPS

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-5852.87Show/hide
Query:  SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS
        SNN N  G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R   S
Subjt:  SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS

Query:  RSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--------
         + + +P QGP+ G+        +P   GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P        
Subjt:  RSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP--------

Query:  ----------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS
                  G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Subjt:  ----------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.0e-4448.26Show/hide
Query:  MRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNH
        M DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R        ATPP                    GNH
Subjt:  MRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNH

Query:  VQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYH
         QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P                  G+ MVG A+ ++P Y +Y YH
Subjt:  VQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYH

Query:  QSHAMGMPAHIFPPSPTTAGPFA-AVPPTS
        QS A+G       P P+ + P + + PP S
Subjt:  QSHAMGMPAHIFPPSPTTAGPFA-AVPPTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATGATGAGCAGCAACAACAGCAATAATACTAATAATGCAGGTTTGTTCGGCGACACGACGTTGACGAAGGTCTTCGTTGGGGGATTAGCTTGGGAGACTCCAAA
GGAAGCCATGAGAGATCACTTCGAGAAGTTTGGTGAGATTCTGGAGGCGGTTATCATTTCCGATAAACTCACTGGCAGATCCAAGGGCTATGGATTCGTTACATTCAAGG
ACGCGGAATCGGCGAAGAAAGCTTGTGAGGATTCCGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTGGCTTCGCTTGGAGCTCGGCGCGGCGGCTCTAGGTCG
GCTTCGGCTACTCCTCCGCAAGGTCCTCAACCAGGATCCAACGGTGGAGGACCGAGGACGACGTCACCAGCCGCACCGGGAAATCATGTGCAGTGGTACTACCCCGCGGG
GACTCATCCCACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCTTTCTATGGATACTCCCCAAGCCCCACTTACATCGCCACCGATATCAGTTACAACCACAAACTGG
GGTATATGAACGGCCATTACACGCAGATGTATCCGGGCCAAGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTCTATCATTACCATCAATCACACGCCATG
GGGATGCCGGCCCACATTTTCCCTCCTAGTCCCACCACTGCGGGCCCATTCGCCGCGGTCCCACCCACTTCTATAATGTCCAAACCAGCCTCTGTACAGTTGGAGGAGGA
TGCAGGGGATGATGATGATGGTAAAAGAAGAGCAGAGAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCATGATGAGCAGCAACAACAGCAATAATACTAATAATGCAGGTTTGTTCGGCGACACGACGTTGACGAAGGTCTTCGTTGGGGGATTAGCTTGGGAGACTCCAAA
GGAAGCCATGAGAGATCACTTCGAGAAGTTTGGTGAGATTCTGGAGGCGGTTATCATTTCCGATAAACTCACTGGCAGATCCAAGGGCTATGGATTCGTTACATTCAAGG
ACGCGGAATCGGCGAAGAAAGCTTGTGAGGATTCCGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTGGCTTCGCTTGGAGCTCGGCGCGGCGGCTCTAGGTCG
GCTTCGGCTACTCCTCCGCAAGGTCCTCAACCAGGATCCAACGGTGGAGGACCGAGGACGACGTCACCAGCCGCACCGGGAAATCATGTGCAGTGGTACTACCCCGCGGG
GACTCATCCCACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCTTTCTATGGATACTCCCCAAGCCCCACTTACATCGCCACCGATATCAGTTACAACCACAAACTGG
GGTATATGAACGGCCATTACACGCAGATGTATCCGGGCCAAGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTCTATCATTACCATCAATCACACGCCATG
GGGATGCCGGCCCACATTTTCCCTCCTAGTCCCACCACTGCGGGCCCATTCGCCGCGGTCCCACCCACTTCTATAATGTCCAAACCAGCCTCTGTACAGTTGGAGGAGGA
TGCAGGGGATGATGATGATGGTAAAAGAAGAGCAGAGAAGAATTAA
Protein sequenceShow/hide protein sequence
MTMMSSNNSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRS
ASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAM
GMPAHIFPPSPTTAGPFAAVPPTSIMSKPASVQLEEDAGDDDDGKRRAEKN