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ClCG02G013890 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G013890
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionLow temperature and salt responsive protein family
Genome locationCG_Chr02:28016545..28017190
RNA-Seq ExpressionClCG02G013890
SyntenyClCG02G013890
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030774.1 Hydrophobic protein RCI2A, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-2094.64Show/hide
Query:  KEKVMGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL
        +E++MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL
Subjt:  KEKVMGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL

XP_004143609.2 uncharacterized protein LOC101203086 [Cucumis sativus]6.5e-2070.45Show/hide
Query:  PLVFGFPFQIENIKNPIYAFPKVPLMLKEK---VMGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        P  FG P  ++   + ++  PK      EK    MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Subjt:  PLVFGFPFQIENIKNPIYAFPKVPLMLKEK---VMGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

XP_022941664.1 low temperature-induced protein lt101.2 [Cucurbita moschata]1.1e-19100Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

XP_026412058.1 low temperature-induced protein lt101.2 [Papaver somniferum]1.9e-1998.15Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

XP_038893278.1 low temperature-induced protein lt101.2 [Benincasa hispida]1.9e-1998.15Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        MGSETFVEI+LAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

TrEMBL top hitse value%identityAlignment
A0A0A0KRZ2 Uncharacterized protein5.3e-20100Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

A0A1S3BED1 low temperature-induced protein lt101.29.1e-2098.15Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYV+VG
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

A0A6J1CCW8 low temperature-induced protein lt101.21.2e-1998.15Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

A0A6J1FUC5 low temperature-induced protein lt101.25.3e-20100Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

A0A6J1KKG3 low temperature-induced protein lt101.25.3e-20100Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

SwissProt top hitse value%identityAlignment
P68178 Salt stress-induced hydrophobic peptide ESI35.3e-1783.02Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        MGS T +E+ILAI+LPP+GVFLRY  GVEFWICLLLTILGYIPGIIYA+YVLV
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

P68179 Low temperature-induced protein lt101.15.3e-1783.02Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        MGS T +E+ILAI+LPP+GVFLRY  GVEFWICLLLTILGYIPGIIYA+YVLV
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

Q9ARD5 Low temperature-induced protein lt101.22.4e-1781.13Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        M S TF+E+ILAI+LPP+GVFLRYG  VEFWICLLLT+LGYIPGIIYA+YVLV
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

Q9ZNQ7 Hydrophobic protein RCI2A4.8e-1884.62Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL
        M + TFV+II+AILLPPLGVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL

Q9ZNS6 Hydrophobic protein RCI2B1.0e-1571.15Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL
        M + TFVEIILAI+LPPLGVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family9.6e-1467.31Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL
        MGS  F+E++ AI +PP+GVFLRYG G+EFW+CLLLT+  +IPG+IYAIYVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL

AT2G38905.1 Low temperature and salt responsive protein family5.1e-2396.3Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
        MGSETF+EIILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG

AT3G05880.1 Low temperature and salt responsive protein family3.4e-1984.62Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL
        M + TFV+II+AILLPPLGVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL

AT3G05890.1 Low temperature and salt responsive protein family7.1e-1771.15Show/hide
Query:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL
        M + TFVEIILAI+LPPLGVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++
Subjt:  MGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL

AT4G30650.1 Low temperature and salt responsive protein family2.4e-1274.51Show/hide
Query:  ETFVEIILAILLPPLGVFLRYG-CGVEFWICLLLTILGYIPGIIYAIYVLV
        E F EI++AILLPPLGV L+ G C VEF ICL+LTILGYIPGIIYA+YV+V
Subjt:  ETFVEIILAILLPPLGVFLRYG-CGVEFWICLLLTILGYIPGIIYAIYVLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGTACAAATATCCCCTCAAAATCAAGATACAGCAAAAGTGCCACACGTGTTAATCCTTCTCCCACGTGTCATTCCCAAAAGCTTAAACCATTGCCACCTTCCCC
CCTGGTTTTTGGGTTTCCCTTCCAAATTGAAAACATAAAAAACCCCATTTATGCTTTCCCCAAAGTTCCTCTTATGCTGAAAGAGAAAGTTATGGGTTCTGAGACTTTTG
TAGAAATCATATTAGCAATACTTCTACCACCACTTGGAGTTTTCCTTCGCTATGGCTGTGGGGTGGAGTTTTGGATTTGTTTGTTGCTGACCATCTTGGGATATATACCT
GGAATTATATATGCAATTTATGTTCTTGTTGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTGTACAAATATCCCCTCAAAATCAAGATACAGCAAAAGTGCCACACGTGTTAATCCTTCTCCCACGTGTCATTCCCAAAAGCTTAAACCATTGCCACCTTCCCC
CCTGGTTTTTGGGTTTCCCTTCCAAATTGAAAACATAAAAAACCCCATTTATGCTTTCCCCAAAGTTCCTCTTATGCTGAAAGAGAAAGTTATGGGTTCTGAGACTTTTG
TAGAAATCATATTAGCAATACTTCTACCACCACTTGGAGTTTTCCTTCGCTATGGCTGTGGGGTGGAGTTTTGGATTTGTTTGTTGCTGACCATCTTGGGATATATACCT
GGAATTATATATGCAATTTATGTTCTTGTTGGGTAAAAGAAAGGGAAGGACTTGAAAGTGTAATTTTGTGAATGTGTGTTTTCAACTGTAGGTTTTACAAGGTTTTTGTT
TTGTTTGTTCTTGGTTGTTTGGATGTAAGTTTGTGGTAAATCAGTGAAGAATAGAAATTTTGTCATTTATTTTGATGAGAATGAGTTTTTGGTTTTAGTCTTCC
Protein sequenceShow/hide protein sequence
MICTNIPSKSRYSKSATRVNPSPTCHSQKLKPLPPSPLVFGFPFQIENIKNPIYAFPKVPLMLKEKVMGSETFVEIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIP
GIIYAIYVLVG