CuGenDBv2

Gene ID	ClCG02G014260
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	nuclear pore complex protein NUP43
Genome location	CG_Chr02:28552896..28558373
RNA-Seq Expression	ClCG02G014260
Synteny	ClCG02G014260
Gene Ontology terms	GO:0031080 - nuclear pore outer ring (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6586038.1 Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-185

86.96

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFA +AL+DSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+AS+DSELSVPEK+LHD PISCVDVMDGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFK DWASGIVHCIDIHPSRKHTCL                  + GSFGT FAWDLR QQQPIILSGLEGSK SN SPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        +GGMSSSQILPAM CSEDGI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_004144716.1 nuclear pore complex protein NUP43 [Cucumis sativus]

2.9e-188

88.32

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFA IAL+DSDSDSSSIEIHS+ Q PLDI PHSTW+SPSRVSSLKTSQL++NPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDVMDGGGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKA+WASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEGSK SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        LGGMSS+QILPAM CSEDGILTSIEQGK+PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_008452472.1 PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo]

7.6e-189

89.1

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFA IAL+DSD DSSSIEIHS+ Q PLDIAPHSTWVSPSRVSSLKTSQL+QNPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDVMD GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKADWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEG+K SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        LGGMSS+QILPAM CSEDGILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

XP_022937892.1 nuclear pore complex protein NUP43 [Cucurbita moschata]

4.6e-186

87.23

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFA +AL+DSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+AS+DSELSVPEK+LHD PISCVDVMDGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFK DWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLR QQQPIILSGLEGSK SN SPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        +GGMSSSQILPAM CSEDGI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_038889924.1 nuclear pore complex protein NUP43 [Benincasa hispida]

4.2e-187

88.83

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWL  LS FSR A IAL+DSDSDSSSIEIHS+ QKPLDIAPHSTW SPSRVSSLKTSQLYQNPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEA++DSELSVPEKMLHD PISCVDVMDGGGECLTVSEDGRVNLVS+GESGLNY RIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKADWASGIVH IDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEGSK SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        LGGMSSSQILPAM CSEDGILTSIEQGKQPV+LLAEPCAINGFDIDR HPSEVICNLEWES+AILSR
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ46 Uncharacterized protein

1.4e-188

88.32

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFA IAL+DSDSDSSSIEIHS+ Q PLDI PHSTW+SPSRVSSLKTSQL++NPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDVMDGGGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKA+WASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEGSK SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        LGGMSS+QILPAM CSEDGILTSIEQGK+PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A1S3BTA6 nuclear pore complex protein NUP43

3.7e-189

89.1

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFA IAL+DSD DSSSIEIHS+ Q PLDIAPHSTWVSPSRVSSLKTSQL+QNPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDVMD GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKADWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEG+K SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        LGGMSS+QILPAM CSEDGILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A5D3BAS9 Nuclear pore complex protein NUP43

3.7e-189

89.1

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFA IAL+DSD DSSSIEIHS+ Q PLDIAPHSTWVSPSRVSSLKTSQL+QNPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPMEAS+DSELSVPEKMLHD PISCVDVMD GGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFKADWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLRSQQQPIILSGLEG+K SNPSPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        LGGMSS+QILPAM CSEDGILTSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A6J1FCG9 nuclear pore complex protein NUP43

2.2e-186

87.23

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFA +AL+DSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+AS+DSELSVPEK+LHD PISCVDVMDGGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAVSQFK DWASGIVHCIDIHPSRKHTCL                  + GSFGTVFAWDLR QQQPIILSGLEGSK SN SPCESEVWEVHYDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        +GGMSSSQILPAM CSEDGI+TSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A6J1HYH3 nuclear pore complex protein NUP43

2.3e-183

85.6

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV
        MAIVSPQQQPQIHRFPQFKY+DGVRWLPPLSAF RFA +AL+DSDSDSSSIEIHS+ Q PLD+AP S W SPSR+SSLKTSQ YQNPLVFASTY GSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHV

Query:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG
        LSVEPM+AS+DSELSVPEK+LHD PISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSYTA KWASPTEFATGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN
        GAV QFK DWASGIVHC+DIHPSRKHTCL                  + GSFGTVFAWDLR QQQPIILSGLEGSK SN SPCESEVWEV YDPYIKSGN
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGN

Query:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        +GGMSSSQILPAM CSEDGI+TSIEQGKQPVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  LGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

SwissProt top hits

e value

%identity

Alignment

Q24JJ9 Nuclear pore complex protein NUP43

1.7e-103

55.26

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLD-------IAPHSTWVSPSRVSSLKTSQL-----YQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF A A YD+D DSSSIEI S+   P         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLD-------IAPHSTWVSPSRVSSLKTSQL-----YQNPLVFASTY

Query:  IGSLHVLSVEPME-ASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ
         GSLHVL ++ +E A+I+   +   +  H   +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEF TGG GF LQ
Subjt:  IGSLHVLSVEPME-ASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVW
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+                  + GS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVW
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVW

Query:  EVHYDPYIKSGNLGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        EV YD Y KS     +SSS+ILP M+CSEDGIL  IEQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  EVHYDPYIKSGNLGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Arabidopsis top hits

e value

%identity

Alignment

AT4G30840.1 Transducin/WD40 repeat-like superfamily protein

1.2e-104

55.26

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLD-------IAPHSTWVSPSRVSSLKTSQL-----YQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF A A YD+D DSSSIEI S+   P         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLD-------IAPHSTWVSPSRVSSLKTSQL-----YQNPLVFASTY

Query:  IGSLHVLSVEPME-ASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ
         GSLHVL ++ +E A+I+   +   +  H   +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEF TGG GF LQ
Subjt:  IGSLHVLSVEPME-ASIDSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVW
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+                  + GS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVW
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVW

Query:  EVHYDPYIKSGNLGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        EV YD Y KS     +SSS+ILP M+CSEDGIL  IEQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  EVHYDPYIKSGNLGGMSSSQILPAMSCSEDGILTSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGATCGTAAGTCCCCAACAGCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGCGTTCGGTGGCTTCCACCGCTCTCCGCATTTAGCCGGTTTGC
CGCCATTGCCCTTTACGACTCTGATTCCGACTCATCCTCCATTGAAATTCACTCGGTGGCTCAAAAGCCACTGGATATAGCTCCTCATTCGACATGGGTATCACCTTCAA
GAGTGTCTTCCCTTAAAACCTCTCAACTCTACCAAAATCCTCTTGTTTTCGCTTCCACTTATATAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGATC
GACTCGGAGCTCTCGGTGCCCGAGAAGATGTTGCACGACGTACCTATTTCATGTGTCGATGTGATGGACGGGGGAGGTGAATGTCTGACTGTTTCGGAAGATGGACGAGT
GAATTTGGTGAGCGTTGGAGAATCTGGATTGAATTATCGTCGGATTTTCGATAGTAATGGGTTGGTGTCGTATACCGCAGTGAAATGGGCATCGCCTACTGAGTTTGCGA
CTGGAGGTTGTGGCTTTAGCTTGCAATGGTGGGATCAGAGAAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGCCGATTGGGCTTCTGGTATAGTTCACTGCATTGATATC
CATCCATCACGAAAGCATACTTGTTTGGTAAAATCTGTTGCCTTTCTTTCTTATTTTTACATGATACTCAAGCAGGCAAAGTCACGGGGCTCTTTTGGTACTGTCTTTGC
CTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGAGCAAGGCTTCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATC
CTTATATTAAGTCTGGCAACTTAGGTGGCATGTCATCTTCACAGATTTTACCTGCTATGAGCTGCTCTGAGGATGGGATTCTAACTAGTATTGAGCAAGGCAAGCAGCCT
GTCGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTTGACATTGACCGTCAACACCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTTTCAAG
ACCTTGA

mRNA sequence

Show/hide mRNA sequence

CCGCCGTCTCAAAAAAATTAAATTCCGACGTCAATCTGATTCTGAGTCTTCCTTGGAAGTGAAAGGAAGCTCCCTTAAACCCTAACAATGGCGATCGTAAGTCCCCAACA
GCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGCGTTCGGTGGCTTCCACCGCTCTCCGCATTTAGCCGGTTTGCCGCCATTGCCCTTTACGACTCTG
ATTCCGACTCATCCTCCATTGAAATTCACTCGGTGGCTCAAAAGCCACTGGATATAGCTCCTCATTCGACATGGGTATCACCTTCAAGAGTGTCTTCCCTTAAAACCTCT
CAACTCTACCAAAATCCTCTTGTTTTCGCTTCCACTTATATAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGATCGACTCGGAGCTCTCGGTGCCCGA
GAAGATGTTGCACGACGTACCTATTTCATGTGTCGATGTGATGGACGGGGGAGGTGAATGTCTGACTGTTTCGGAAGATGGACGAGTGAATTTGGTGAGCGTTGGAGAAT
CTGGATTGAATTATCGTCGGATTTTCGATAGTAATGGGTTGGTGTCGTATACCGCAGTGAAATGGGCATCGCCTACTGAGTTTGCGACTGGAGGTTGTGGCTTTAGCTTG
CAATGGTGGGATCAGAGAAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGCCGATTGGGCTTCTGGTATAGTTCACTGCATTGATATCCATCCATCACGAAAGCATACTTG
TTTGGTAAAATCTGTTGCCTTTCTTTCTTATTTTTACATGATACTCAAGCAGGCAAAGTCACGGGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTCACAACAGC
AGCCTATCATTCTTTCGGGTCTAGAAGGGAGCAAGGCTTCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAACTTA
GGTGGCATGTCATCTTCACAGATTTTACCTGCTATGAGCTGCTCTGAGGATGGGATTCTAACTAGTATTGAGCAAGGCAAGCAGCCTGTCGAACTGCTGGCAGAACCATG
TGCAATTAATGGTTTTGACATTGACCGTCAACACCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTTTCAAGACCTTGATTTTCAGAAGTCATCG
TTTTTTCTAAATCATCAGGTTCCAATGCACTATATTAATTCCTTTAACGATTTAAGGAGTATTCATAGCTTTTTATCTCTCATTGAGTGCATGTAATTTCTTAGTTTTAG
GCTCATGTAAATTTTGTGGCTGTAGCTTTGTTTGTTTACCACATAATTGGAACTCAATTTTGATATGGATTTTCATACTGGTCAGCGACCATATCAGGG

Protein sequence

Show/hide protein sequence

MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAAIALYDSDSDSSSIEIHSVAQKPLDIAPHSTWVSPSRVSSLKTSQLYQNPLVFASTYIGSLHVLSVEPMEASI
DSELSVPEKMLHDVPISCVDVMDGGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAVKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDI
HPSRKHTCLVKSVAFLSYFYMILKQAKSRGSFGTVFAWDLRSQQQPIILSGLEGSKASNPSPCESEVWEVHYDPYIKSGNLGGMSSSQILPAMSCSEDGILTSIEQGKQP
VELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

ClCG02G014260 (gene) of Watermelon (Charleston Gray) v2.5 genome