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ClCG02G014340 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G014340
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUbiquitin-like domain-containing protein
Genome locationCG_Chr02:28674545..28677344
RNA-Seq ExpressionClCG02G014340
SyntenyClCG02G014340
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056118.1 Ubiquitin [Cucumis melo var. makuwa]2.7e-4281.36Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEEID
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALT RKE                 DNDFEEI+
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEEID

Query:  IVQPNDFYQSRDVDSGNW
        IV PNDFYQSRD DSGNW
Subjt:  IVQPNDFYQSRDVDSGNW

XP_008452565.1 PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]2.4e-4381.67Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALT RKE                 DNDFEE
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDFYQSRDVDSGNW
        I+IV PNDFYQSRD DSGNW
Subjt:  IDIVQPNDFYQSRDVDSGNW

XP_016901017.1 PREDICTED: uncharacterized protein LOC103493547 isoform X2 [Cucumis melo]9.2e-4380.83Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALT RK                  DNDFEE
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDFYQSRDVDSGNW
        I+IV PNDFYQSRD DSGNW
Subjt:  IDIVQPNDFYQSRDVDSGNW

XP_022937980.1 uncharacterized protein LOC111444204 [Cucurbita moschata]2.0e-4280Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALT RK                 DDN+FEE
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDFYQSRDVDSGNW
        IDIV  NDFYQSR+ DSGNW
Subjt:  IDIVQPNDFYQSRDVDSGNW

XP_038889494.1 uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]1.7e-4482.5Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALT RK                 DDNDFEE
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDFYQSRDVDSGNW
        IDI+QPNDFYQSRD D+GNW
Subjt:  IDIVQPNDFYQSRDVDSGNW

TrEMBL top hitse value%identityAlignment
A0A1S3BTJ1 uncharacterized protein LOC103493547 isoform X11.2e-4381.67Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALT RKE                 DNDFEE
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDFYQSRDVDSGNW
        I+IV PNDFYQSRD DSGNW
Subjt:  IDIVQPNDFYQSRDVDSGNW

A0A1S4DYF9 uncharacterized protein LOC103493547 isoform X24.5e-4380.83Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALT RK                  DNDFEE
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDFYQSRDVDSGNW
        I+IV PNDFYQSRD DSGNW
Subjt:  IDIVQPNDFYQSRDVDSGNW

A0A5A7UM04 Ubiquitin1.3e-4281.36Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEEID
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALT RKE                 DNDFEEI+
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEEID

Query:  IVQPNDFYQSRDVDSGNW
        IV PNDFYQSRD DSGNW
Subjt:  IVQPNDFYQSRDVDSGNW

A0A6J1FIC7 uncharacterized protein LOC1114442049.9e-4380Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALT RK                 DDN+FEE
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDFYQSRDVDSGNW
        IDIV  NDFYQSR+ DSGNW
Subjt:  IDIVQPNDFYQSRDVDSGNW

A0A6J1HY58 uncharacterized protein LOC1114685519.9e-4380Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALT RK                 DDN+FEE
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDFYQSRDVDSGNW
        IDIV  NDFYQSR+ DSGNW
Subjt:  IDIVQPNDFYQSRDVDSGNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53930.1 Ubiquitin-like superfamily protein9.0e-0444.83Show/hide
Query:  CDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFR
        CD IE   NIK K++     PV  QRLI    G+ LED  TLAD  ++ND+++ L  R
Subjt:  CDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFR

AT5G57860.1 Ubiquitin-like superfamily protein7.3e-3061.47Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALT +K                 DDN+FE+
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDF
        ++I QP DF
Subjt:  IDIVQPNDF

AT5G57860.2 Ubiquitin-like superfamily protein7.3e-3061.47Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALT +K                 DDN+FE+
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDF
        ++I QP DF
Subjt:  IDIVQPNDF

AT5G57860.3 Ubiquitin-like superfamily protein7.3e-3061.47Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALT +K                 DDN+FE+
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEE

Query:  IDIVQPNDF
        ++I QP DF
Subjt:  IDIVQPNDF

AT5G57860.4 Ubiquitin-like superfamily protein2.4e-2071.21Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVEN
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+L+ + EVLEDSK+LADQKV +
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGTATATCCGAATCAAACGCCATAAGACAACCTACTTTATCCAGTGTGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTATTGACCA
ACCAGTAGTTGATCAGCGTTTGATTCTGGTGGGGAGTGGGGAAGTATTGGAGGATTCCAAAACACTGGCTGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACCT
TTCGAAAAGAAATGTTGTCTCGTCACATGTTTTCTTCATCTTTTTCTCTTCTTTGTGTAGATGATAACGACTTCGAGGAGATCGACATTGTCCAGCCAAATGATTTCTAC
CAATCTCGTGATGTGGATTCTGGCAATTGGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAACAATAATATATTATTCTAACCGCGGAGGGGTTAGTCCAACCGAGTTTCCAAACGCTGACAACAAAGTCGTCCAAAGTGCTTTGCGCTCATTCTTTTTCATTTC
ATCGCGATGGACTGAACGAACTTTCCCAAGCATAAGCAAAAGATCTCTCGCAGATTTCCAGACAGCGGCAGTGGAGGCAGTATTCGAAGCGTTGATCCATTAGTTCTTGT
TTCAAGTTAACCATGGCAATGTATATCCGAATCAAACGCCATAAGACAACCTACTTTATCCAGTGTGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTC
CCTTATTGACCAACCAGTAGTTGATCAGCGTTTGATTCTGGTGGGGAGTGGGGAAGTATTGGAGGATTCCAAAACACTGGCTGATCAGAAGGTTGAAAATGATGCAGTTG
TGGCTCTAACCTTTCGAAAAGAAATGTTGTCTCGTCACATGTTTTCTTCATCTTTTTCTCTTCTTTGTGTAGATGATAACGACTTCGAGGAGATCGACATTGTCCAGCCA
AATGATTTCTACCAATCTCGTGATGTGGATTCTGGCAATTGGTGA
Protein sequenceShow/hide protein sequence
MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTFRKEMLSRHMFSSSFSLLCVDDNDFEEIDIVQPNDFY
QSRDVDSGNW