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ClCG02G014650 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G014650
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description40S ribosomal protein S23-1
Genome locationCG_Chr02:29038781..29045172
RNA-Seq ExpressionClCG02G014650
SyntenyClCG02G014650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156333.1 uncharacterized protein LOC111023254 [Momordica charantia]1.5e-4695.92Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVV
        MALRR LGFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVV
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVV

XP_022937466.1 uncharacterized protein LOC111443868 [Cucurbita moschata]9.9e-4697.87Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDK
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDK

XP_022969628.1 uncharacterized protein LOC111468599 [Cucurbita maxima]4.4e-4696.88Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

XP_023538321.1 uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]9.9e-4695.83Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALRRF GFSDG+LMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

XP_038889141.1 uncharacterized protein LOC120079031 [Benincasa hispida]4.7e-4897.96Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVV
        MALRRFLGFSDGE+MRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRKVV
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVV

TrEMBL top hitse value%identityAlignment
A0A1S3BWM4 uncharacterized protein LOC1034939374.9e-4388.66Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR LGFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A5D3BBN9 40S ribosomal protein S23-14.9e-4388.66Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR LGFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A6J1DQC3 uncharacterized protein LOC1110232547.4e-4795.92Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVV
        MALRR LGFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVV
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVV

A0A6J1FAF1 uncharacterized protein LOC1114438684.8e-4697.87Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDK
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDK

A0A6J1I1J3 uncharacterized protein LOC1114685992.1e-4696.88Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G57540.1 unknown protein1.0e-4078.12Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.2 unknown protein1.0e-4078.12Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.3 unknown protein1.0e-4078.12Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTAGACGATTCTTAGGCTTTTCAGATGGTGAGCTCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTACTGTT
GGAGGAGGACTTGCGTTCTGGATTCTTTGTAGATTACATTATGGTCCGAGAATTACAGTACCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGTATCGATGAGT
GCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAAAAGGAAAGTTGTAAGTGATGTGAGTGGAGAAGGA
GAGGAAGATGATAAGGAAACCATATTGCTTTTTAGGGGCAGTTCTGGAATTATTGTTAAAGTAACTTCAATTCCATTTGTTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTAGACGATTCTTAGGCTTTTCAGATGGTGAGCTCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTACTGTT
GGAGGAGGACTTGCGTTCTGGATTCTTTGTAGATTACATTATGGTCCGAGAATTACAGTACCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGTATCGATGAGT
GCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAAAAGGAAAGTTGTAAGTGATGTGAGTGGAGAAGGA
GAGGAAGATGATAAGGAAACCATATTGCTTTTTAGGGGCAGTTCTGGAATTATTGTTAAAGTAACTTCAATTCCATTTGTTGAGTAG
Protein sequenceShow/hide protein sequence
MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVSDVSGEG
EEDDKETILLFRGSSGIIVKVTSIPFVE