; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G015550 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G015550
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionReverse transcriptase domain-containing protein
Genome locationCG_Chr02:29835279..29835642
RNA-Seq ExpressionClCG02G015550
SyntenyClCG02G015550
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]2.5e-0565.85Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CISKI+A+RLCVWLP FI  N+ AF+   +I+DNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
KAA0060725.1 uncharacterized protein E6C27_scaffold72G00120 [Cucumis melo var. makuwa]4.2e-0563.41Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CISKI+A+R+CVWLP FI  N+ AF+   +I+DNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]2.5e-0565.85Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CISKI+A+RLCVWLP FI  N+ AF+   +I+DNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
XP_016902060.1 PREDICTED: uncharacterized protein LOC103496880 [Cucumis melo]4.2e-0563.41Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CISKI+A+R+CVWLP FI  N+ AF+   +I+DNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
XP_022157428.1 uncharacterized protein LOC111024128 [Momordica charantia]2.7e-0465.85Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CI+K++ANRL VWLP FI  N+ AFV    IVDNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
TrEMBL top hitse value%identityAlignment
A0A1S4E258 uncharacterized protein LOC1034968802.0e-0563.41Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CISKI+A+R+CVWLP FI  N+ AF+   +I+DNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
A0A5A7U4M4 Reverse transcriptase domain-containing protein1.2e-0565.85Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CISKI+A+RLCVWLP FI  N+ AF+   +I+DNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
A0A5A7V4C1 Reverse transcriptase domain-containing protein2.0e-0563.41Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CISKI+A+R+CVWLP FI  N+ AF+   +I+DNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
A0A5D3DXQ8 Reverse transcriptase domain-containing protein1.2e-0565.85Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CISKI+A+RLCVWLP FI  N+ AF+   +I+DNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
A0A6J1DTC3 uncharacterized protein LOC1110241281.3e-0465.85Show/hide
Query:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
        CI+K++ANRL VWLP FI  N+ AFV    IVDNI+LCQEL
Subjt:  CISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACATCAATCATTTTGGTTCCTAAATGACCTTCCTCATGAGGCATTGGAGACTTCCAGTCGATCTCTTGTTTGCATTTCAAAGATTATTGCAAATCGACTA
TGTGTGTGGCTTCCTTACTTCATTATCCTTAATAAGTTCGCTTTTGTGAAAAGGTGCAATATTGTGGATAATATTATGCTTTGTCAAGAGTTG
mRNA sequenceShow/hide mRNA sequence
ATGCGACATCAATCATTTTGGTTCCTAAATGACCTTCCTCATGAGGCATTGGAGACTTCCAGTCGATCTCTTGTTTGCATTTCAAAGATTATTGCAAATCGACTA
TGTGTGTGGCTTCCTTACTTCATTATCCTTAATAAGTTCGCTTTTGTGAAAAGGTGCAATATTGTGGATAATATTATGCTTTGTCAAGAGTTG
Protein sequenceShow/hide protein sequence
MRHQSFWFLNDLPHEALETSSRSLVCISKIIANRLCVWLPYFIILNKFAFVKRCNIVDNIMLCQEL