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ClCG02G017670 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G017670
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPR domain zinc finger protein
Genome locationCG_Chr02:32187291..32187752
RNA-Seq ExpressionClCG02G017670
SyntenyClCG02G017670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646853.1 hypothetical protein Csa_020628 [Cucumis sativus]5.8e-3469.23Show/hide
Query:  KSSQKEGRRNEPS-LRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAE
        K+SQKE R  EPS   PK WPL LLLLGCT G ILF  V QN    S+ SVVVVGGL+V  A  VAVAVAVIG A LVTWITV+V L L+GRSRRRLVAE
Subjt:  KSSQKEGRRNEPS-LRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAE

Query:  GRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLL
        GRKISKE+MVGF+V+VLLKE NVLGAISAA  GYL    G ++
Subjt:  GRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLL

XP_022947668.1 uncharacterized protein LOC111451463 [Cucurbita moschata]2.5e-2156.64Show/hide
Query:  EGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEI
        EG R  P  RP+ W  A   LGC  GV+ F LV          ++VVVGGLLV  A+A       AAA+VTWITV+V L L+GRSRRR+VAEGRKISKEI
Subjt:  EGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEI

Query:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        MVG VVKVLLKE  VLG +  A L  LA AWGP   LPI +Y+
Subjt:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

XP_022970724.1 uncharacterized protein LOC111469624 [Cucurbita maxima]9.3e-2457.53Show/hide
Query:  SQKEGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKIS
        +Q EG R  P  RP+ W  A   LGC  GV+ F LV          S+VVVGGLLV  A+A       AAA+VTWITV+VLL L+GRSRRR+VAEGRKIS
Subjt:  SQKEGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKIS

Query:  KEIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        KEIMVG VVKVLLKE  VLG +  A LG LA AWGP   LP+ +Y+
Subjt:  KEIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

XP_023534045.1 uncharacterized protein LOC111795714 [Cucurbita pepo subsp. pepo]6.7e-2256.64Show/hide
Query:  EGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEI
        EG R  P   P+ W  A   LGC  GV+ F LV          ++VVVGGLLVS A+A       AAA+VTWITV+V L L+GRSR+R+VAEGRKISKEI
Subjt:  EGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEI

Query:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        MVG VVKVLLKE  VLG +  A LG LA AWGP   LPI +Y+
Subjt:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

XP_038902352.1 uncharacterized protein LOC120088986 [Benincasa hispida]1.3e-4682.01Show/hide
Query:  EPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFV
        EPSLRPK WPLALLLLG TSG ILF LV QNG SS+TT+VV++GGLL+S AVAVAV    A ALVTWITVMVLLSL+GR+RRRLVAEG+KISKEIMVGFV
Subjt:  EPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFV

Query:  VKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYFG
        VKVLLKE NV+GAISAA LGYLAFAWGPLLF P PNYFG
Subjt:  VKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYFG

TrEMBL top hitse value%identityAlignment
A0A0A0KE95 Uncharacterized protein2.8e-3469.23Show/hide
Query:  KSSQKEGRRNEPS-LRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAE
        K+SQKE R  EPS   PK WPL LLLLGCT G ILF  V QN    S+ SVVVVGGL+V  A  VAVAVAVIG A LVTWITV+V L L+GRSRRRLVAE
Subjt:  KSSQKEGRRNEPS-LRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAE

Query:  GRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLL
        GRKISKE+MVGF+V+VLLKE NVLGAISAA  GYL    G ++
Subjt:  GRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLL

A0A6J1G791 uncharacterized protein LOC1114514631.2e-2156.64Show/hide
Query:  EGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEI
        EG R  P  RP+ W  A   LGC  GV+ F LV          ++VVVGGLLV  A+A       AAA+VTWITV+V L L+GRSRRR+VAEGRKISKEI
Subjt:  EGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEI

Query:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        MVG VVKVLLKE  VLG +  A L  LA AWGP   LPI +Y+
Subjt:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

A0A6J1I6G7 uncharacterized protein LOC1114696244.5e-2457.53Show/hide
Query:  SQKEGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKIS
        +Q EG R  P  RP+ W  A   LGC  GV+ F LV          S+VVVGGLLV  A+A       AAA+VTWITV+VLL L+GRSRRR+VAEGRKIS
Subjt:  SQKEGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKIS

Query:  KEIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        KEIMVG VVKVLLKE  VLG +  A LG LA AWGP   LP+ +Y+
Subjt:  KEIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

A0A7J7CEJ2 Uncharacterized protein9.2e-0945.38Show/hide
Query:  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVL
        ++L C+   I F L W   Q+  SSS++      + V++GG+    ++  A+AV   A LV WITV+VLL+  G+ RR LV EGRKI++EI VGFV+K+L
Subjt:  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVL

Query:  LKEANVLGAISAAFLGYLA
        LKE N++ A+  A LGY A
Subjt:  LKEANVLGAISAAFLGYLA

A0A7J7DCH0 Uncharacterized protein1.2e-0845.38Show/hide
Query:  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVL
        ++L C+   + F L W   Q+ +SSS++      + V++GG+    ++  A+AV   A LV WITV+VLL+ +G+ R  LV EGRKI+KEI VGFV+K+L
Subjt:  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVL

Query:  LKEANVLGAISAAFLGYLA
        LKE NV+ A+  A LGY+A
Subjt:  LKEANVLGAISAAFLGYLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03730.1 unknown protein1.5e-0849.38Show/hide
Query:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVLLKEANVLGAISAAFLGY
        VV+G +  + ++  A AV   A +V WI+V+VLL+  G+SRR LV E RKI++E+  GFV KVLLKE N + A+  A LGY
Subjt:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVLLKEANVLGAISAAFLGY

AT4G03600.1 unknown protein2.4e-0948.78Show/hide
Query:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYL
        VV+G +  + ++  A+ V   A +V WI+V+VLL+  G+SRR LV EGRKI++E+ VGFV KVLLKE NV+ A  A    +L
Subjt:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYL

AT4G28330.1 unknown protein5.0e-0742.86Show/hide
Query:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYLAF
        V++G +    ++A A+ +   A +V WI+V+V ++  G+SR+R+V EGRK++KEI  GFV +VLLKE N + A+  A L Y  F
Subjt:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYLAF

AT4G28340.1 unknown protein4.6e-0539.29Show/hide
Query:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYLAF
        V++G +    ++A A+ +   A +V WI+V+V ++   +SR+++V EGRK++KEI  G+V KVLLKE N + A+  A + Y  F
Subjt:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIMVGFVVKVLLKEANVLGAISAAFLGYLAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAACGAGCCATCTTTGAGACCAAAACCATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCAT
TCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTG
GTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGAGATAATG
GTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCC
TATTCCAAATTATTTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAACGAGCCATCTTTGAGACCAAAACCATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCAT
TCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTG
GTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGAGATAATG
GTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCC
TATTCCAAATTATTTTGGTTGA
Protein sequenceShow/hide protein sequence
MAVDKSSQKEGRRNEPSLRPKPWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKEIM
VGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYFG