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ClCG02G017860 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G017860
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionLoricrin-like
Genome locationCG_Chr02:32417348..32417584
RNA-Seq ExpressionClCG02G017860
SyntenyClCG02G017860
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273122.1 unnamed protein product [Prunus armeniaca]3.1e-0758.14Show/hide
Query:  MGRPILVATGAGFRD---VNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC-----GGGGCGGGGCGGCGGG
        M R   V  G G  +   +   +SGG+FLL +IL+S+SLISMVIFACGD     KKRY GGGGG      GGGGCGGGG GGCGGG
Subjt:  MGRPILVATGAGFRD---VNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC-----GGGGCGGGGCGGCGGG

GAY54286.1 hypothetical protein CUMW_155540 [Citrus unshiu]1.2e-0658.33Show/hide
Query:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNG----GGGGC-GGGGCGGGGC--GGCGG
        MGR + V   A   + N    GGL LL +++ SIS+ISMVIFACGD G P++ R NG    GGGGC GGGGCGGGGC  GGCGG
Subjt:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNG----GGGGC-GGGGCGGGGC--GGCGG

KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1065.43Show/hide
Query:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGG-GGCGGGGCGG--GGCGGCGGG
        MGR I  A G G  DV L SSGGL LL+ +LLS+SL+SM+IFACGDS    K++ NGGG GG GGGGCGG  GG GGCGGG
Subjt:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGG-GGCGGGGCGG--GGCGGCGGG

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]6.0e-1164.94Show/hide
Query:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGCGGGGCGGCGG
        MGRPI  A G G  DV L SSGGL LL+ IL+S+SL+SM+IFACGDS    K++ NGGG   GG GCGGGGCGG GG
Subjt:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGCGGGGCGGCGG

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1374.07Show/hide
Query:  MGRPILVAT--GAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGG-GGGCGGGGCG-GGGCGGCGG
        MGRPIL A   G GF+DV LVSSGGLFLLS ILLSISL+SM+IFACG+S DP++K   GG GGG GGGG G GGGCGGCGG
Subjt:  MGRPILVAT--GAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGG-GGGCGGGGCG-GGGCGGCGG

TrEMBL top hitse value%identityAlignment
A0A0A0LJD5 Uncharacterized protein2.4e-0557.69Show/hide
Query:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKR--YNGGGGG--CGGGGCGGGGCGG
        MGRPI    G    DV     GGL LLS+ILLSISL+SM+IFAC +  + +++R   +GG GG  CGGGGCGGGGCGG
Subjt:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKR--YNGGGGG--CGGGGCGGGGCGG

A0A251PYS0 Uncharacterized protein9.1e-0551.14Show/hide
Query:  MGRPILVATGAGFRD---VNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC---------GGGGCGGGGCGGCG
        M R   V  G G  +   +   +SG + LL +IL+S++LISMVIFACGD     KKRY GGGGG          GGGGCGGGGCGG G
Subjt:  MGRPILVATGAGFRD---VNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC---------GGGGCGGGGCGGCG

A0A2H5PPJ4 Uncharacterized protein5.7e-0758.33Show/hide
Query:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNG----GGGGC-GGGGCGGGGC--GGCGG
        MGR + V   A   + N    GGL LL +++ SIS+ISMVIFACGD G P++ R NG    GGGGC GGGGCGGGGC  GGCGG
Subjt:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNG----GGGGC-GGGGCGGGGC--GGCGG

A0A6J5WYX6 Uncharacterized protein1.5e-0758.14Show/hide
Query:  MGRPILVATGAGFRD---VNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC-----GGGGCGGGGCGGCGGG
        M R   V  G G  +   +   +SGG+FLL +IL+S+SLISMVIFACGD     KKRY GGGGG      GGGGCGGGG GGCGGG
Subjt:  MGRPILVATGAGFRD---VNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGC-----GGGGCGGGGCGGCGGG

V4UCP2 Uncharacterized protein4.1e-0549.47Show/hide
Query:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNG---------------GGGGC--GGGGCGGGGCGGCGGG
        M R +LV   A   + N    GG+F L +++ S S+ISMVIFACGD G P+K R +G               GGGGC  GGGGCGGGGCGG GGG
Subjt:  MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNG---------------GGGGC--GGGGCGGGGCGGCGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGCCAATTCTTGTTGCCACCGGCGCTGGCTTCAGAGACGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCTATCTCTCTCAT
ATCAATGGTCATATTTGCCTGCGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGTGGTGGTGGTTGTGGGG
GGTGTGGAGGAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGCCAATTCTTGTTGCCACCGGCGCTGGCTTCAGAGACGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCTATCTCTCTCAT
ATCAATGGTCATATTTGCCTGCGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGTGGTGGTGGTTGTGGGG
GGTGTGGAGGAGGCTGA
Protein sequenceShow/hide protein sequence
MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGCGGGGCGGCGGG