CuGenDBv2

Gene ID	ClCG02G018900
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	CBS domain-containing protein CBSX3, mitochondrial
Genome location	CG_Chr02:33639785..33644231
RNA-Seq Expression	ClCG02G018900
Synteny	ClCG02G018900
Gene Ontology terms	NA
InterPro domains	IPR000644 - CBS domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570609.1 CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-64

67.48

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGN+VKTAVLQQ+RVANP MRPAMLSRF+TS SS N+EEHGFESTTIDDILKAKGKSADGSWLWCTT+DTVYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        PAEQNSIAGIITER                                             DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREEL+RLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

XP_004139921.3 CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus]

1.4e-67

70.39

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDILKAKGKSADGSWLWCTTED+VYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        PAEQNSIAGIITER                                             DNRIRHIPVID+KGMKGMVSIGDVVRAVVSEHREELDRLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

XP_008456267.1 PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo]

5.0e-68

70.87

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDILKAKGKSADGSWLWCTTED+VYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        PAEQNSIAGIITER                                             DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

XP_022986939.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita maxima]

3.0e-65

67.48

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGN+VKTAVLQQ+RVANP+MRPAMLSRF+TS SS N+EEHGFESTTIDDILKAKGKSADGSWLWCTT+DTVYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        PAEQNSIAGIITER                                             DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREEL+RLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

XP_038900356.1 CBS domain-containing protein CBSX3, mitochondrial [Benincasa hispida]

2.7e-66

68.45

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS+N+EEHGFESTT+DDILKAKGKSADGSWLWCTTED+VYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        PAEQNSIAGIITER                                             DNRIRHIPVI++KGM+GMVSIGDVVRAVVSEHREELDRLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KG88 Uncharacterized protein

1.5e-65

64.16

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDILKAKGKSADGSWLWCTTED+VYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER-----------------------------------------------------------------DNRIRHIPVIDDKGMKGMVSI
        PAEQNSIAGIITER                                                                 DNRIRHIPVID+KGMKGMVSI
Subjt:  PAEQNSIAGIITER-----------------------------------------------------------------DNRIRHIPVIDDKGMKGMVSI

Query:  GDVVRAVVSEHREELDRLNAYIQGGY
        GDVVRAVVSEHREELDRLNAYIQGGY
Subjt:  GDVVRAVVSEHREELDRLNAYIQGGY

A0A1S3C2E8 CBS domain-containing protein CBSX3, mitochondrial

2.4e-68

70.87

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDILKAKGKSADGSWLWCTTED+VYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        PAEQNSIAGIITER                                             DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

A0A5A7SSJ5 CBS domain-containing protein CBSX3

2.4e-68

70.87

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASS N+EEHGFESTTIDDILKAKGKSADGSWLWCTTED+VYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        PAEQNSIAGIITER                                             DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

A0A6J1FUM7 CBS domain-containing protein CBSX3, mitochondrial-like

5.6e-65

67.48

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGN+VKTAVLQQ+RVANP MRPAMLSRF+TS SS N+EEHGFESTTIDDILKAKGKSADGSWLWCTT+DTVYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        PAEQNSIAGIITER                                             DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREEL+RLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

A0A6J1JHG9 CBS domain-containing protein CBSX3, mitochondrial-like

1.5e-65

67.48

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQGAVRSFLSHGN+VKTAVLQQ+RVANP+MRPAMLSRF+TS SS N+EEHGFESTTIDDILKAKGKSADGSWLWCTT+DTVYDAVQS            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        PAEQNSIAGIITER                                             DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREEL+RLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        +IQGGY
Subjt:  YIQGGY

SwissProt top hits

e value

%identity

Alignment

Q9LEV3 CBS domain-containing protein CBSX3, mitochondrial

1.3e-50

53.4

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQG +RSF+S GNVVK +VLQ +RV NP ++P++    S S     MEE GFESTTI D++K+KGKSADGSWLWCTT+DTVYDAV+S            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        P EQ ++AGIITER                                             DNRIRHIPVI DKGM GMVSIGDVVRAVV EHREEL RLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

Arabidopsis top hits

e value

%identity

Alignment

AT1G47271.1 Cystathionine beta-synthase (CBS) family protein

4.0e-15

32.28

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Query:  EHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITERD---------------------------------
        E G E+ T+ D+L  K    D +W+ C T DTV DAV++            +P +Q  IAGI+TERD                                 
Subjt:  EHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGIITERD---------------------------------

Query:  ------------NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY
                    N IRH+PVID K + G++S+ DVV+A+V     EL RLN +I+G Y
Subjt:  ------------NRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY

AT5G10860.1 Cystathionine beta-synthase (CBS) family protein

9.1e-52

53.4

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Query:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK
        MQG +RSF+S GNVVK +VLQ +RV NP ++P++    S S     MEE GFESTTI D++K+KGKSADGSWLWCTT+DTVYDAV+S            K
Subjt:  MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXK

Query:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA
        P EQ ++AGIITER                                             DNRIRHIPVI DKGM GMVSIGDVVRAVV EHREEL RLNA
Subjt:  PAEQNSIAGIITER---------------------------------------------DNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNA

Query:  YIQGGY
        YIQGGY
Subjt:  YIQGGY

Sequences

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CDS sequence

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ATGCAAGGTGCTGTGCGATCATTTCTGTCACATGGAAACGTTGTGAAAACTGCTGTTTTGCAACAAATTCGTGTAGCAAACCCCCATATGAGGCCTGCAATGCTTTCACG
CTTTTCAACATCGGCTAGTTCTGTAAACATGGAAGAGCATGGCTTTGAAAGCACTACCATTGATGACATCTTGAAAGCTAAAGGCAAAAGTGCTGATGGATCTTGGCTTT
GGTGCACCACAGAAGACACAGTCTATGATGCTGTTCAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACCTGCGGAGCAAAATTCAATAGCTGGTATT
ATAACAGAGAGAGATAACCGAATTAGGCACATACCCGTCATCGACGACAAGGGCATGAAGGGCATGGTGTCAATTGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCG
AGAGGAGCTGGACCGCCTGAATGCTTATATTCAGGGAGGTTATTGA

mRNA sequence

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AAAGAAAAAGAAATAATTGAGAGACAAAATCGGGTCTCACAGTTCCATTCCATGAGCTTCGCTTCGCTTAATCTTCCTTTAGGTCTCATTCTCCAAAACAGCTAACTCTT
CCTCTTTCACTTTTTTTGGTTCTCAACCTCCTTCTTCAACCTACAGTTTTTCTTCCGGATCATCCTCAGTGCAACAGGTAAAGATGCAAGGTGCTGTGCGATCATTTCTG
TCACATGGAAACGTTGTGAAAACTGCTGTTTTGCAACAAATTCGTGTAGCAAACCCCCATATGAGGCCTGCAATGCTTTCACGCTTTTCAACATCGGCTAGTTCTGTAAA
CATGGAAGAGCATGGCTTTGAAAGCACTACCATTGATGACATCTTGAAAGCTAAAGGCAAAAGTGCTGATGGATCTTGGCTTTGGTGCACCACAGAAGACACAGTCTATG
ATGCTGTTCAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACCTGCGGAGCAAAATTCAATAGCTGGTATTATAACAGAGAGAGATAACCGAATTAGG
CACATACCCGTCATCGACGACAAGGGCATGAAGGGCATGGTGTCAATTGGAGACGTGGTTCGGGCTGTGGTGAGCGAGCACCGAGAGGAGCTGGACCGCCTGAATGCTTA
TATTCAGGGAGGTTATTGAGTTGCTGCTATTGACTTTGGTTGCTTGGTGTATGATGTTTCGAAACACCAGAATGCTTCAGCTCTTGTACATATGATGATGGCCTGGTATG
CGCACTCTCTTATTAATATGGTCGTGCTTCCTGTTGCTTCTAGTACAATAACCGACGGATGTAATAATAGACGGTTACTTTGCTTTGCAAAATTACACCTGAATTTGCAT
TATCATTGATGGAGATGACAAA

Protein sequence

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MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSVNMEEHGFESTTIDDILKAKGKSADGSWLWCTTEDTVYDAVQSXXXXXXXXXXXXKPAEQNSIAGI
ITERDNRIRHIPVIDDKGMKGMVSIGDVVRAVVSEHREELDRLNAYIQGGY

ClCG02G018900 (gene) of Watermelon (Charleston Gray) v2.5 genome