CuGenDBv2

Gene ID	ClCG02G020050
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Rab5-interacting
Genome location	CG_Chr02:34664041..34666423
RNA-Seq Expression	ClCG02G020050
Synteny	ClCG02G020050
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004143124.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

8.6e-64

96.88

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

XP_008464121.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

6.6e-64

97.66

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

XP_022947918.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata]

3.3e-63

96.09

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + A PVKFNLHQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

XP_022986965.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

2.5e-63

95.31

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + +KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

XP_038900616.1 respirasome Complex Assembly Factor 1-like [Benincasa hispida]

2.9e-64

97.66

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + +KPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFE5 Uncharacterized protein

4.1e-64

96.88

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

A0A1S4E4J0 uncharacterized protein C20orf24 homolog

3.2e-64

97.66

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

A0A5D3DK85 Rab5-interacting

3.2e-64

97.66

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + AKPVKFNLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

A0A6J1G7Y2 uncharacterized protein C20orf24 homolog isoform X2

1.6e-63

96.09

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + A PVKFNLHQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

A0A6J1JFH8 uncharacterized protein C20orf24 homolog

1.2e-63

95.31

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Query:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH
        + +KP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGGH
Subjt:  ENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGH

Query:  GALLQEGLFASITLFLLAWILVYSLAHF
        GALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  GALLQEGLFASITLFLLAWILVYSLAHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

4.5e-15

38.74

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Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F  I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAH
        +     ++  H
Subjt:  LAWILVYSLAH

Q9CQT9 Respirasome Complex Assembly Factor 1

3.3e-18

40.18

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Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F  I+  V+Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAHF
        + WI+ Y+  H+
Subjt:  LAWILVYSLAHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

5.4e-48

73.73

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Query:  HQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFA
        H+   HQN HL  F  AKLFD EASWDKDQLGDVLHWIRQ V ++ GLLWG+IPLVGGIW L+FLAIS+ +VYGYYA++LK+DEE+FGGH ALLQ+GLFA
Subjt:  HQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGGHGALLQEGLFA

Query:  SITLFLLAWILVYSLAHF
        S++LFLLAWILVYSL+ F
Subjt:  SITLFLLAWILVYSLAHF

AT5G59410.1 Rab5-interacting family protein

3.8e-54

77.52

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Query:  ENAKPVKFN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG
        + +K  K N L Q ++HQN HL+P KLAKLFDP+ASWDKDQLGDVLHWIRQ V ++ GLLWGSIPLVGGIW ++FLAIS+ +VYGYYAMILKVDEE+FGG
Subjt:  ENAKPVKFN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        H ALLQEGLFAS+TLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

Sequences

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CDS sequence

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mRNA sequence

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ATGCGGCTGGCATCTTCCACACGTGCTCCCAAGTCCAAAGCCGAAAACGCAAAACCGGTTAAGTTCAATCTGCATCAGCATCAAGATCACCAAAATGGTCACTTGGCCCC
ATTCAAGCTCGCTAAATTGTTCGATCCAGAGGCCTCCTGGGACAAGGACCAACTAGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTTGGACTGTTGT
GGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAATTTTCTTGGCAATATCAACCAGCGTTGTATATGGATATTATGCAATGATATTAAAAGTCGATGAAGAAGAA
TTTGGAGGTCATGGGGCTCTCCTCCAAGAGGGCCTTTTTGCTTCTATAACTCTCTTTCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGATTGGCGAAGAA
TGATTTTGCATCCATGAATTACTTGGTGAAGTTCCAACAATGAACTTAGTTATACTTGATGCCCTGCTCATTTACGTTGCTTCTAATTGGTGGCACAAATTTTTTTAACA
TTCATCATGTTGAACAAATTGATTTAGCCGAGCAGGAAAACTTCAGCATTTGATATATGATGATAGATTGATTTTCGATCTCAAATTCGCTGTTGACATTCTCCAAAGGC
CACATAGAGATGGGCTATGGATGTAATCCTTGTTAAAATTAACACCTTGTATTGTCATCAATTAATAGCTAGTTGGGCACCAACAATGTTCTGTACATTTGATGATCTAG
GGTGAAACCTACTTGTTCTTAAGTAATGGTTTCTCCTTTCCCG

Protein sequence

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MRLASSTRAPKSKAENAKPVKFNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSVVYGYYAMILKVDEEE
FGGHGALLQEGLFASITLFLLAWILVYSLAHF

ClCG02G020050 (gene) of Watermelon (Charleston Gray) v2.5 genome