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ClCG02G020080 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G020080
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionflowering-promoting factor 1-like
Genome locationCG_Chr02:34688534..34688923
RNA-Seq ExpressionClCG02G020080
SyntenyClCG02G020080
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY34019.1 FPF1-like protein 1 [Theobroma cacao]3.4e-5179.67Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVFDK GVARLI+NPT+ESFE KDP +PGT+TAPGARPRVLVYLPTN VI SYAELEQCLAELGW+RY N+++P+LLQFH+S  SAHLISLP++FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRDP
          +PMHMYDIVVKNR FF+VRDP
Subjt:  KFKPMHMYDIVVKNRQFFQVRDP

KAG5238222.1 flowering-promoting factor [Salix suchowensis]2.0e-5178.57Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDKNGV RL++NPTRESFE K+PPHPGTATAPGARPRVLVYLP N VIRSY ELEQ L ELGWSRY N ++P LLQFH+S DSAHLISLPK+F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRDPTSS
         FK +HMYDIVVKNR FF+VRDP +S
Subjt:  KFKPMHMYDIVVKNRQFFQVRDPTSS

KAG6570697.1 Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. sororia]4.3e-6292.25Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVFDKNGVARLISNPTRESFECKDPP+PGTATAPGARPRVLVYLPTN VIRSYAELEQ L ELGWSRYRN AEP+LLQFHRSHDSAHLISLPKSFA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRDPTSSLPS
        KFKPMHMYDIVVKNR FF+VRDP SS PS
Subjt:  KFKPMHMYDIVVKNRQFFQVRDPTSSLPS

KAG6760852.1 hypothetical protein POTOM_034035 [Populus tomentosa]8.9e-5279.37Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE K+PPHPGTATAPGARPRVLVYLP N VIRSY ELEQ LAELGW+RY N  +P LLQFH+S DS HLISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRDPTSS
         FKP+HMYDIVVKNR FF+VRDP +S
Subjt:  KFKPMHMYDIVVKNRQFFQVRDPTSS

XP_022148408.1 flowering-promoting factor 1-like [Momordica charantia]1.2e-5384.73Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKS
        MSGVWVFDKNGVARLI+NPTRESFE KDPP+PGTATAPGARPRVLVYLP N VI SYAELEQ L ELGW+RYRN  AEP EL++FHRSHDSA LISLPKS
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKS

Query:  FAKFKPMHMYDIVVKNRQFFQVRDPTSSLPS
        FAKFKPMHMYDIVVKNR FFQVRDP S+  S
Subjt:  FAKFKPMHMYDIVVKNRQFFQVRDPTSSLPS

TrEMBL top hitse value%identityAlignment
A0A061H020 FPF1-like protein 11.6e-5179.67Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVFDK GVARLI+NPT+ESFE KDP +PGT+TAPGARPRVLVYLPTN VI SYAELEQCLAELGW+RY N+++P+LLQFH+S  SAHLISLP++FA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRDP
          +PMHMYDIVVKNR FF+VRDP
Subjt:  KFKPMHMYDIVVKNRQFFQVRDP

A0A0A0KE84 Uncharacterized protein4.2e-6395.24Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTN VIRSYAELEQ LAELGW+RY NLAEP+LLQFHRSHDSAHLISLPKSFA
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRDPTSS
        KFKPMHMYDIVVKNR FFQVRDPTSS
Subjt:  KFKPMHMYDIVVKNRQFFQVRDPTSS

A0A4U5QFB7 Uncharacterized protein3.7e-5178.57Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE K+PPHPGTATAPGARPRVLVYLP N  IRSY ELEQ LAELGW+RY N  +  LLQFH+S DSAHLISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRDPTSS
         FKP+HMYDIVVKNR FF+VRDP +S
Subjt:  KFKPMHMYDIVVKNRQFFQVRDPTSS

A0A6J1D405 flowering-promoting factor 1-like6.0e-5484.73Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKS
        MSGVWVFDKNGVARLI+NPTRESFE KDPP+PGTATAPGARPRVLVYLP N VI SYAELEQ L ELGW+RYRN  AEP EL++FHRSHDSA LISLPKS
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRN-LAEP-ELLQFHRSHDSAHLISLPKS

Query:  FAKFKPMHMYDIVVKNRQFFQVRDPTSSLPS
        FAKFKPMHMYDIVVKNR FFQVRDP S+  S
Subjt:  FAKFKPMHMYDIVVKNRQFFQVRDPTSSLPS

B9HPG8 Uncharacterized protein8.1e-5178.57Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVW+FDKNGVARLI+NPTRESFE K+P HPGTATAPGARPRVLVYLP N VIRSY ELEQ LAELGW+RY N  +P LLQFH+S +SAHLISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRDPTSS
         FKP+HMYDIVVKNR FF+VRDP +S
Subjt:  KFKPMHMYDIVVKNRQFFQVRDPTSS

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 14.8e-2449.18Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLPT  V+ SY+ LEQ L  LGW RY    + +LLQFH+   S  LISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRD
        KF  ++MYDIVVKN  +F VRD
Subjt:  KFKPMHMYDIVVKNRQFFQVRD

O24340 Flowering-promoting factor 13.7e-2450.82Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVF KNGV RL+ NP +   +              +R +V+VYLPT  VI SY+ LEQ L  LGW RY    + +LLQFH+   S  LISLPK F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRD
        KF  ++MYDIVVKN  +F VRD
Subjt:  KFKPMHMYDIVVKNRQFFQVRD

Q0E1D7 Flowering-promoting factor 1-like protein 39.0e-2349.59Show/hide
Query:  MSGVWVFDKNGVARLISNP-TRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSF
        M+GVWVF K+G+ R + NP + ES    D          G R +VLV++P+  V+ SY  LE+ L ELGW RY  L +P LLQFH+   + HLIS+P+ F
Subjt:  MSGVWVFDKNGVARLISNP-TRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSF

Query:  AKFKPMHMYDIVVKNRQFFQVRD
        +KFK +HMYDIVVK R  F+VRD
Subjt:  AKFKPMHMYDIVVKNRQFFQVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 12.4e-2348.39Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKS
        MSGVWVF+KNGV RL+ NP  +S  +  +    G       R ++LV+LP++ V+ SY  LE+ L  LGW RY +    + LLQFH+   S  LISLP+ 
Subjt:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKS

Query:  FAKFKPMHMYDIVVKNRQFFQVRD
        F+KF  +HMYDIVVKN   F VRD
Subjt:  FAKFKPMHMYDIVVKNRQFFQVRD

Q8LR63 Flowering-promoting factor 1-like protein 25.0e-2146.09Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRN------LAEPELLQFHRSHDSAHLIS
        MSGVWVF +NGV +L+ NP   +         G     G R + L+++PT  V+ SYA LE+ LA LGW RY +       A   +LQFH+   S  LIS
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRN------LAEPELLQFHRSHDSAHLIS

Query:  LPKSFAKFKPMHMYDIVVKNRQFFQVRD
        LPK F++F  +HMYDIVVKNR  F+V D
Subjt:  LPKSFAKFKPMHMYDIVVKNRQFFQVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.7e-2448.39Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKS
        MSGVWVF+KNGV RL+ NP  +S  +  +    G       R ++LV+LP++ V+ SY  LE+ L  LGW RY +    + LLQFH+   S  LISLP+ 
Subjt:  MSGVWVFDKNGVARLISNPTRESF-ECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPE-LLQFHRSHDSAHLISLPKS

Query:  FAKFKPMHMYDIVVKNRQFFQVRD
        F+KF  +HMYDIVVKN   F VRD
Subjt:  FAKFKPMHMYDIVVKNRQFFQVRD

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.4e-2348.36Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVF+ NGV RL+ NP +           G +T    R  VLVYLPT   + SY+ LEQ L  LGW RY +  + +L+Q+H+   S  LISLP+ F+
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRD
        KF  ++MYDIVVKN   F VRD
Subjt:  KFKPMHMYDIVVKNRQFFQVRD

AT5G24860.1 flowering promoting factor 13.4e-2549.18Show/hide
Query:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA
        MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLPT  V+ SY+ LEQ L  LGW RY    + +LLQFH+   S  LISLP+ F 
Subjt:  MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFA

Query:  KFKPMHMYDIVVKNRQFFQVRD
        KF  ++MYDIVVKN  +F VRD
Subjt:  KFKPMHMYDIVVKNRQFFQVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGCGTGGCTCGTTTAATATCCAACCCAACCAGGGAGTCCTTCGAGTGCAAGGACCCTCCCCATCCAGGCACCGCCACCGC
GCCAGGGGCTCGTCCCAGAGTCCTGGTCTATCTTCCAACCAACCTAGTCATCCGGTCCTACGCCGAACTCGAGCAGTGCCTGGCCGAACTCGGGTGGAGTCGGTACCGAA
ATTTAGCCGAACCGGAGCTCCTCCAATTCCACCGCTCTCATGACTCGGCTCACTTGATTTCCCTCCCCAAAAGCTTCGCTAAGTTCAAGCCCATGCATATGTACGACATT
GTTGTCAAAAATCGCCAGTTCTTCCAAGTTCGAGACCCTACGTCATCACTACCTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGCGTGGCTCGTTTAATATCCAACCCAACCAGGGAGTCCTTCGAGTGCAAGGACCCTCCCCATCCAGGCACCGCCACCGC
GCCAGGGGCTCGTCCCAGAGTCCTGGTCTATCTTCCAACCAACCTAGTCATCCGGTCCTACGCCGAACTCGAGCAGTGCCTGGCCGAACTCGGGTGGAGTCGGTACCGAA
ATTTAGCCGAACCGGAGCTCCTCCAATTCCACCGCTCTCATGACTCGGCTCACTTGATTTCCCTCCCCAAAAGCTTCGCTAAGTTCAAGCCCATGCATATGTACGACATT
GTTGTCAAAAATCGCCAGTTCTTCCAAGTTCGAGACCCTACGTCATCACTACCTTCCTAG
Protein sequenceShow/hide protein sequence
MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNLVIRSYAELEQCLAELGWSRYRNLAEPELLQFHRSHDSAHLISLPKSFAKFKPMHMYDI
VVKNRQFFQVRDPTSSLPS